XLOC_000957 (gene) - C. hemisphaerica

Overview
NameXLOC_000957
Unique NameXLOC_000957
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:464320..468247+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000957 ID=XLOC_000957|Name=XLOC_000957|organism=Clytia hemisphaerica|type=gene|length=3928bp|location=Sequence derived from alignment at sc0000012:464320..468247+ (Clytia hemisphaerica)
ccttttttgattttatcaaacgcacaaaaacaacaaagcaGTCTTCTTGA
ATTTGGCGGCAAGCAAGATGGCGGAAAGTTCCCATTGAGCTTAAGATTTG
AAGCAGTTGAAGTAACATGAAGGACTTTATTGTCAAGAATAACAGAATTT
ACTCCAAGCTaagtatattttattatttttttacaacttATATTGTTTTT
TTGGGATTAAAGAAAGTTATTAAAAAATGATAAGGAAGATTTAAGACAGA
AAAAAGGTACTatactgtttgaaatttttttatggcttTTGATGCATTTT
TTTTCAAGGACGATGTTGATATTATTTCATTGCTGTACATTATATGCTAC
ATTGTATAGTAAAGAGAAAAGCAAGCTTGAAttacagattttgaaaataa
tttagatTTACTTTAGCTAGAGGATTCTGTTTTTATGTTGTGTTTGTTTG
TATTCTCTTCATTTTGGTTTTACACATATTTTGATTTCGTCCATATTATa
gtaaaaatcttttgatgtaTGTAAATCTTTGAACAAATATTTCCACTTAC
AGTATGGCAAatgcaaaaactaaatttgagtCGATTTGTTGATTAGAGAT
GGATCATTATTTCTCCCTTAGATCTTTTTGAAACACTGTAATATCTGGCA
TATGTGTAGTCATCAAGCATGCCAAACACATATCAGCATTAGCCATTCAA
TAGAGTGTCAAAATGTGGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTGAAGTTCTTTTGAATCAGATGTGCATGTTG
TTAGTCATTTTAATGCCAAAACAACATCAACAGTCAAAACATTCTAAACC
ATGTTTAAACTGTAGAAATTATGATTCAATTGGACtttcatctttttgtt
ttgttttttgtaattacttTCAAAGCttcttaattttcttaaaaaaattg
gaaagcATAATGCTAAagtagtttcaaaaaaaaaagcctTGTGTACTGTA
ACTTCTGAAtaacatttttgtaaacaaaataatttcgtTTGAGATAAATT
TGTTCTGCAAAGTTTTTTTGTGCATGAAAGTTATCTGACGAGGTGTTGAG
ATTTTCTCTACTAGGCAAGTTAATTTTTTTTAGATAAATCTTTAATTATA
AGTGCAAGTTTATGCTAATCAGTAACCAGTCAGTTAGCCATGGGCAGATA
TATTTTGGATTGCATTTTCCATTATTCTGTTTAGCCTGAATTTCTTGGTT
GTAAACTGTTTTTTGATCTTTCTTCTATTAACTCTGCCTAAATCCTTGTT
GTAAGGCCATGGCTAAAAAATCTGTAGCTTCACCCAACAATTGAATTAAC
ACTTTTTGTTATTAATGCTAATAATTATaaagttttatatttatttttta
ttttagcacTAAAGTGATGTTGCGTGTACATGGACATTGTTTGAATTTCA
AGGAAATTAACCCTAAACTAAGTAAGTCATTATTATGTCGCAATATGGTC
TTACTCAGTATCTTgactctcaaaattttattttacttccTCTCCAATGA
AGAAAGTGATCAGTAAAAGACTactataaaacaatagaaattctttCCCT
GTTGGTTTTTGATAGAAATGTTCATCCCCACTGTGAGAataagttccacc
ggggctgtgagacaggagtgttatcaataaaaacaaagcttgagaagtaa
aaagttaaaatacctGGACTTTTTCgtcagtgaaatatttttccctaaaa
tggctatcaaaaaaaattcgaatcaCCTCTAGATATGATTCTCAATAAGT
TTGCGCAGTCTTTAAATGTAACTTTTCAAATTGGTGGCCCTTCCCAAatg
ttttcatcaaaagttgcaaaagacacccctttctcactgCCCATTTGGAA
CTTTTgctttcagtggggataaaagcttttatcaaaatcccaatgggaat
agaaattatattgttccaaggttaaaagatccagtggggatggtttttga
ttgcaatttttaaacattgaatttagaATGGGGATGAAGTGTAAGTCAAT
TTTTATAGTGGACTGGAATCTCAGGGTAATTTTCCATCAGGGACGAAGAC
AAATTTCTTGCCAAATTTCCCAAAGGAGCTTTGACGGGGCTTTGACCTAT
TATTAGAACACATACCGTCTGGTCCCTCAAGTGTAAGGTTTTACTTATGA
TGTAAAGTACGATTTAGCTGGTGAAGAACTTAAGATGTCACTTAAACTAT
AAGATTTTGTTTTTGTTCCTTTTTAGGAGTTACAAATCCTTTTGTCTGCA
CAAGTAAAACCAACTGGTTAGCCGAGGTAAGAATAAATATTTTTGAGTTA
TCTTCGATTACTTGCGTATAAGCCTATTATTCATTTCCCCATGTAATAAC
TATATTGAgaaattgacaatttttgattgttttttcattAGGCAAAAGGA
TCTAATATGGTTAAcactttttttcacttttcaaagatatttaacCATAT
GAACACTTGAGCTGATTTGTAACTCTCGAATAGCGCTCTgcaacgcatac
gtcataattattacttttttttacatttgtacgagttgtaatgcggctca
attaaagatacgtgcaagttcttatatatcttttgtcaaatgatgcaatt
aatGTGCAAAAGAAACGCAAAAGGAGCTCCAATGCTCGTacaaaccacag
atatctgtaaagcccgaacgGCTagaggcaactttaagctttctccagca
aaaaaaagtgaagcaaaaatttgactttttaaatttcgtgccgatggata
ggatctagcattttaattgttttcggagcgcgagataaaaaaagtAGACG
GCAagcgctatttcacatctctcaaaccggtaaaattgcatattttagtc
acgtgactttggtaggaaatccttccaaacctaggcttcacttttcgata
aaagccgcaaatctagcccttcgNNNNNNNNNNNNNNCAAACACATCAAg
aagagtaatgattatgtcaaaagtgTGCGCTATATAAACCTTGAAAGATG
CTTACCCTATTTCCCATTCAAGCTACCAAATTGACAGAATTTTGGAACTC
cttctgaaaattttattttgtctttcagATATCACTTGGAACTTTGACGT
AAAGAAATTATTAAATGGTTGAACAAGACAACATTTTGGCTGGTGATGAA
TAAAGATTCGGATGCCGGCGACTCTAATATAAGCATAATGATCAAATAAT
TGATAAATATATACTGtattgtgtcacagacccggtggtaCTTCTACATA
CTGTAAAAATCAGACAAATTGTACCCGGTTTAGAGAAAAACCCTGACTTT
TCACCCACCCGGTAATCTATAATGAAGGTTTATCTCTGAAGCTGTAAACA
GTACCCTttcaccttttttataagaaccaacgtttttttttaacccttgg
gatgttcttaactttttttttcttttaaaagcctaagaatatttttattt
tcatcttttagtgggtattttatccattttctgagaaattgggtctgaaa
tgtTCTTACATTTTAACaaacgaagccttatgttcttataaagaaaacat
gTGGAATTACACAATCGTTTAAGACAAGCGATCTTTCATTCCTATCGTAA
TTTGTACCTTAATTTTATGTCTACtacagtacacttttttttataaaaac
cagtaaatttttgctgaggctcggctgttcttattttttttggcactttg
agccttgaattgttcttattttgttctt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001782TCONS_00001782Clytia hemisphaericatranscript
TCONS_00001783TCONS_00001783Clytia hemisphaericatranscript
TCONS_00001784TCONS_00001784Clytia hemisphaericatranscript
TCONS_00001785TCONS_00001785Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:464320..468247 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.9	1.34	0.13	0.08	6.21	5.35	5.63	4.6	9.92	3.63	4.43	8.13	6.16	5.92	8.22	4.69	8.03	8.54	4.22	2.58	12.06	9.03	4.26	3.93	5.78	7.71	3.34	1.88	1.54	1.16