XLOC_001186 (gene) - C. hemisphaerica

Overview
NameXLOC_001186
Unique NameXLOC_001186
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000019:323569..327825+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001186 ID=XLOC_001186|Name=XLOC_001186|organism=Clytia hemisphaerica|type=gene|length=4257bp|location=Sequence derived from alignment at sc0000019:323569..327825+ (Clytia hemisphaerica)
AAATAATCaatccaaaatttttatatgaattcACAATTTAAAACcagatt
gtaattttttttctagcaGTCATCAGGATCTTCACTGGTTCATGTTGATG
CTTCACAAGTCTCAACTACTCAACAACCCACTTATGTTTTGTTGCAAGCT
CCGGGTGATTCTGAATCAGGTGAGTTGacaatatattaaaaaaatccTGT
AAAAGAGGTTTGCGTGCTATATTGAAACTTTGAGTGGATATATTGATACT
AATGAACATAACCCATAGCTCAGTTTCCAAGATATGTATTTCAGGGTCAG
TTTTCTGttgaatttaaagattttaggTGAAGTATGGATTTTCGtctaaa
atataaatttttgtattAAGTTCCATTTTTCcactattttagaaaaaaga
gtaCCCTGTGATTTATTCTCTTTTTGAAcaagttttgttaaaaatttcta
aagtaTTTTTCATTCATTCCTGTATTGCTAGGTGGTCAACCACAAGTTTT
TCTTGCAATGCAAACAACCAACATTAGTACAGATGCGCAAGGATCCACAC
CTTACATCACCCTGCAGCCTGTATCAGTTGACGGTGGAGAGTTGACGTCA
GGCACATTGGTTCAGGAAGGCGTCAATCTTCAACAGGCTGTCATGACAAA
TAGTAATAGTTCTGACGTTAAAGGAGATTCTTCTGAAAACAATccacaac
agcaacaacaacaggTTTGAAAATACTCTCCATGAACTACTTAATTGCAT
GcagttttttgtttataatacGTCTTTATCTGTTAGTTCTGGTTAGTTAT
CAATACTTGTGACTCCTCTTTATTAAccaaatttcttcaatttttaataG
TACTGCAAAAATACCTACCACTGTGCTTTTATATAACAATTCctatttgt
cttttttttctcctttgCTTTAGGTTGTTTTGAGCATTCCAAGCCAACAA
TCTATTCTGTCAGCTACAAACGGCAACAGTGGGCAATTAGTGACCTATCT
TCAACCACTTGGCAACATTGGTGTGCCAGTGTCAAACATGGATCAAGGCC
AAGTTTTAATGGCTGCCAGTGATCTCCAAGGCAACGTTACATTACATAAT
ATGGCAAACATAAATGGTGGTAAAAGAAATGGTGAGTTTGGGCGCATTAA
GAATCCTCTAAAACCTTTTTTCTTGTTGTTTGATGAATAGCCAAATAAAT
TAACGGAGTGAATGAAAAGAGTTGTCATTTGTGTCACCAAAAGTCAGTTG
ATTAACAAAATGAGAATCAAAGAGTTTTCCTTCTTAACATCTGACTCTGC
GTGTCAATCAGGAAAAGGAAATAAACATCATCTCCCCATGCCGGTTTTGT
GtttctaataaaagtttttcatgttttattccAGTTCTTACTACAAACAG
ACAAGCTACTCAAGTGAATTTGTCCACTCCTCGACGTCGTTTGAGTACAG
ATCCAAGAAGCTGTGATCAATGTGGCCGGACTTTCAAATACCCATCTGAT
CTCAAGAAACATTTACAAATCCATACGGGTATGCCAATACTCTCAATTTC
TCACTTATTATTACTTACATTAACGATTATTTATCTCACTTTCTCTTATA
ACTCCCACACTAATTATAGAAAATGCAAAACCGAGCTTTCAGCCTCGGAA
AACAGCAGAGTATTCTCATATTGTAATGAGGTTATACCAATACTTACTCA
ATACTTTCAATTACTCACTTTCTATACATTTATAATTAAGCATACAATCG
GCTACAATTAAAAGGGGCTCCAACACTAATTCTTTGGGAATGCAAAATTT
ACAGAATTTACAGCCTCCAAAAACAGCATATGAAAATATTGTAATGAGGT
TATCTTCATGACCATAATAGAGGCTTAATCCAAATACATGCAGACGTCTC
TTTAAAAGAATTCATTGTATATGTATGTGTATACAGGTGTATAGTCAATG
TTTTGAATTCTTACTGAAAATGTTGAACCACTAAACTGTTTTTTTCCCAT
AGATATCAAGAAGTTTCAATGCGAAGACTGCAATCGATCCTTTCGACGAT
TGCATCAACTCAACGTTCATCGTCGTATTCACACCGGTGAAAAGCCCTAT
GTTTGTAATAGGTAGGTGCAATTTTGTGTATCTCTCTTAATTAATATCAA
ACTCTCTTGTCAGCTTTTAGATTAAGATTAGTGTAATTTTCGGATTATCA
TTCGTACTGTGCATCCTATTAATCTTACCAACGCGATAAGGCTATTCTTG
GACGTACCAGGATGAACGGTAATGACTTTATAGTATATCAATGTAATGAC
AAACGTTTTGGTCATTCTGCTCTAacttgattttcaaaatatatttgatt
taCATCGAGTAAGAGAGCGTATCGAATAAAAAGAAGTCACTCTAATTCGA
TAAGCAAAAGAATATCAAATTATAGCTTGATTGTAACTGTTTTTGTTTTC
CAGATGTAACGCGCAATTTCGACACGATTCAACACTTACGATGCATATCC
GAACACGTCACGATCATTTGAAACCGTTCACTTGCGATGGTTGCTCTAAG
AAATTTGGTCGAATGTCTCACCTACGGAAACACCAACACAATGTATGCGG
GCGCACCAGTATCCGGACGTCCATAGCTCAATGTAAATATTGTGACGCTA
TTTTCTCCAAGAAGTCCGACTTGAAGTCTCACTTTCCGGTCTGTGAAAAG
AAGCCAGAACGCGTTGAGAAAGACTTGAACGCACAACAAGTTTATCAGTG
TGAAACATGTGGTAAAGTTTTCTCGCGCGTTTACGATTTCAAACGTCATC
AGTTATCCCATTCCGATGAGAAACCATACGGATGTCCTCAGTGCGGAAAG
ACATTTAAAGAGCGTTCTTCATTGAATAAACACGTGAAACGTATGCATTG
TAGTGAAGGCGACGGCACGATCCCGATTGACGACGACGGAATAATCGCTG
ACGATGATGACGAGGACGAAGACGAATTGTCGGTGGACGAAAACGAACTC
GCTTCTCAAGCCAACATTACGGTACCGAAGGCAGCAGTTTTCACTCAATC
AGGAATCATGACCAATGCTGTCAGTCAAGTTGTTACTGCGAACGGTCAAA
CTATCCCTGCTTCTGAgattttgaatttcccagaAGTTGCAGAAGCCTTA
GGTATCAATTCCGGATCACACGCACGTGTACTCAACACTGACGGCCATTC
AACCATGATCGCAATAACGCAACCAGGGAACCTGGAAACCAGTGAGGTTT
CCATGGATATGGAACAAAACATGATGCAAGATGGTACCATAATAGTGACA
GATAACTCGACAACAAATACTGAACCTTTTATAACACCAAACGAACAATT
AAATCAAATTACACCCGTTGACGAAAGTGAGCCAATAGAAACTGTGGACG
GGATACCCGTTATTTATAATCCGGAAAATGTAGACAGTTCGGCAGCTTCG
AGTATTTATACAACGTCACTGGCATCCTCTATGGTATTCAAAAGAGACAG
TGTGAAAGATTACGCCATCAAACACGAAGAAGAAGTGGCGGATCATGTGA
AGGCGGAACAGGCGGCCGCCCATGATTTACAGCCAGTTGAGGACCCTAAC
ATGTTAGTGGAAGAGTGAAATTTGTGTAGAAATTCGCACTTGGGTTGTAG
AAATTCTTGATAtacgtaagtcatttttctagcggaagcacccgaaaaaa
gccgggatttgacctctctctgttactaaaaatagaaacacggaggtcaa
aatccggcttttttgggtgcttccgctaaaaaaatatgacgtcatcttga
cttacgcatatcaagaataggtTGGgttattttgaagaatatggTCATCT
TGAAAACCTTGACTAATGATGTGTGAAAAATAACAACATTAAAATATATC
ACGCAGTTCTTTCCCTACCtttcattttgatgattttctttattttcttc
ctATTTATTGGGGCTATCTGGAGAAGATTTGGTCCTAGTATCTTTTTGTG
GGTCTTATCTCTTCAAACTTGGTTCTTTTAAAGCTCTTTGATTAAATGAT
TTACTAAACAGGAATCTTTTTGGGACTGCGGTTATTAAAGACTTTGTAGT
ATAGAGGGTGTATCTATTTTGGCTTTATTTTGTACATACTTTATTAGACT
AGAGTTTCCTAATAATAATATAGAACTTAttcgaaatgaaaaagttttta
tatcTTATTTTTTCTGATGGCTACAGAAGAGAATGGAACAAATAGAATGC
GTTTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002241TCONS_00002241Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002241-proteinTCONS_00002241-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:323569..327825 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.49	8.91	3.28	2.46	48.77	35.02	31.07	34.15	15.76	21.03	16.31	13.38	11.94	12.75	10.77	16.49	21.55	17.85	10.09	9.9	13.33	14.2	19.71	18.38	17.54	18.22	12.92	13.68	16.4	19.82