XLOC_001239 (gene) - C. hemisphaerica

Overview
NameXLOC_001239
Unique NameXLOC_001239
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000019:1005898..1011586-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001239 ID=XLOC_001239|Name=XLOC_001239|organism=Clytia hemisphaerica|type=gene|length=5689bp|location=Sequence derived from alignment at sc0000019:1005898..1011586- (Clytia hemisphaerica)
TTTCAGTGAAATTATTTAAAAAACAAAGTCCCAGCAATGAGGATAATATT AATAAAAATGTAACTTGTTCAAAAAGAAGTCATCACTGATCACAATATGG GAATCAAAATATTGGAGAAATTTTCCTTTTGGAATAACAAAGATGGCTTC ACCCCCATCGACGTGGTTTGTTTACTACCCAATGGTATTTGTCATACGTT CCCGTCATTACGCGCCGATACGCCGTTGAGTCAGATCAAGGAGAAATTAT GGCAAGAAGCCACTCGTTTCGCAATGGCTTCCATGTTACGATCGCGTAAC CAATATGTATTTGCCGTCGTAAGCCGTAACGGGGGTACGGAAGAACTCAT CAATGAATCTTTATCGTTGTTTGATATCAAGCCCGTACGCCCGTATTTGA AAGTGGTCGAACGACAAGGTGATGAGCAACTCAAACAACTGAACTCTAAA ATAAATCTCTTGATCGGTCGGCCAGCATCCACGTCAGCTAAAGATGAGCA AGTTAACGACTTACGTACGCGATGTATGTTGTTTTGTAATCGTATCTCGG AGCAGCGTAGCCGCGCGTCTTGGGAGCGACGGGCTATCTATACTTTCCCG CCTGATTTTGAGGAAGATACAGACCTCCCGATTGCTTTGCAACGAACTCT AGATACGCTAGATGGGTTTATTGCGATCTCGATACACTACAAGTACAACC ATGTTCTACACAAGCAAACACACCGCGTCTCTCATAAACTACACCCGAGA GATCTGATCGAGAAGGGTTTACAGAAGTTTAACATCAACAATCGTACCAA TGAAAAACCTGATGATTATGTACTCAAAGAGCTTGGAAGTGAAAATTATT TCCTCGGACATGTTGAAAACGAAACAGAGATTTATCGTGAACGTCCACTT ATACAGTATAAGGTATGTTGTATTTTGTTTTGTTTCATGTAACACATGTA TAGCTGACTCTCTCTCTCTCTCTCTCTAATTCGATCTCTAAGGGACCAAC ACAATCACTTTCTTAGAATTAGAAATTCGAATTAGCGCGAGTTCACTGTA AACACGTCTTTCGTCCTTTCCAAGATTCATCAGTGCTGCTCCTGTATAGA GCATAAACATACAAATGGCTTTAAAATTAAAGTTATGAATCATTTTAGAG ATTTATATGAGTTGGCTCATTGAGAGAGTTTCTCTGCTGCATACTACCAG ATTTTTTTTATTTCGCAGCTCAACTACTTAATTGTACTGTCTTGTCTTCT TTCAAGTCAACCAAATATAAATGCAAATATTTTGCATATTCTACCTCCAT AGCAAAGAAGGTTTAAAATTATGAGAACGATAACTTTGACATCCAAACCT AAGATCTCACACAAATCTACCTTCACTTTCAGTTTGTTTCGACAAAATTC GGCCTACTAACACTTTACTAATAATCCTATAACCTCTGTTATCATAACTC CTGATGTGAATCGGCTATCATCCAGATGACTTGTATCATTTTGGGATCCG TCCTACTATGATGCTAGTCTCATCTTGATGATAGTATTAAAGATTTCTAT TGGAGTTGGCTCATTGAAAGAGTTTCTCTGCTGCATTCTGTGATATTACA TGAAACGGTTATTTTGTCGTGTTATGAGGCTCCTTTTATCTTGAACAAGA CTTTCTTGTTTACTTTAATCGAATAAATTTTCCTGAGATGAAACTTAGAA ATTCAAAAAATAAAATCGTAAACTTTCCTAGATTCATTTTCGCGAATCAG CATTTTCACATATTTGGCTTGTGTTTATTTCCTCAAAGTATTTAAAAATG ACTTTGAGAACGTCAATTTTTGTCAGAAATAACAGTTTTTTAAGTAGTTA TCTTAAAAATTCCGCGTGGATGTAATTTCGCGAGTCAGCAATCTCACGCG ATTTTGTGAGATTTATTTTCGTCCGCATAAGCCATAAGCCAATTGTCATC GTTACATTTTTTCATTCTTACAAAGTATATTCGCGAGTGTTTGTTATGGG ATCGTCAAATCTGTTTGAAGATCGTTGAACGTTCACAGTTAGACGTTGGC AAGATCGAGCGTGGATCCAACGAAGTACCGCCACCATTACCGAACAAAGA ACGAGAATCGAATCGATTGTCTCTGTGGGATATCACACCGTCAACTATGT TGCGATTGAAAGTTCATTGCGCACTGAATATCATGGCTGATGCTAATATG TGGGTGAGTGTGACCATATTTAGTCTTTATCAAATTTTGGCGGGGTTAAA TTTTGCGGATTTTGCGGATTTGGGTGTCATCCAAACAAAACTGAAAATAT GTACTTTTTGAATGTTTACTGACATCAAAGAGGCGCTAATAATGCGTATT TCAAAAATCAACATGCATAATTTGACAGTAAGAGGCACAAAATCGTGAAA TTATTGTCTCCTAATAATGCCATCCGCTGAATTAAGTTTCCGCGAAATCT TAAAATTTCGCGGATGAGCTCAACCTCGAAATTTAATCCCCGCCAAAATT AATTCCATTAAAGTGTCACAACCTCGTCCCCGTGAATTTAAGGCTTTATT ATGTTACTGATTGACGCCAGAGAATATTATCTAGAGCTTACCTTAACTGA ATTTATTTTCGTGTGGACTTCCTTTTTGCAAATTTATAATCTGAAATTTT CGCCTGGAATAAAATTCGAATCAGCTTCTTTTTATACTTAATATATCTAA TTCTTCTAAGGGTTTAGGCGAAAATTTCCGACCTTAAATTTTTCCACGGG GACTAAATTTGGCAAAAATCGCCAATTAAATCCATTTATGGTATTTCCCT GTAACAGAAAGAAGTACAAGTGGGTATTTTCCACGGTGGTGAGGAAGTAT GCGAATCACAGATCACATCACGGCAAAGAGGTATCCATCCGGTGTGGAAC GAATATCTAGAGTTCAAACTACCCGTCAGTAACATTCCACGCATGGCACG TGTATGTGTCTGTATTGTTGGTTGGAAGAAGAGAGAAGAGAGAAAGAAAA AGGTGAGATTTTGTCTTTTAAAGCGACATTAAAAAATCGAATGTTTGTAG GCCGAAGACCTGGGCTCCAAACATTCGAATAAGTTCCAAAGTGGAATAGA CGTTTAATTGCGTAGAAAAAAGTTAAATCATGTTGACAAATAGGTTGTGA AATTTAAATTCTTTCACTTAATTTTGATTTATAGGAAGCTGTCCCGTTAG CGTGGGCTAATATTTCAGTGTTTGACTACAAAGCCATCATGAAACAAAGT ACGCATCGAGTGAATTGCAAACAACACACTGCTCGCTCTATCAAAGGCGA TCATTCTTTCTTCAATCCCCTTGGTGCTGTCTCTACCGACGCTGGTAGTG AATCGAAGGGGCTCTGCATTGTCATTGATTTCATGAAATTTGCTCATACT GTGGTCTACCCCACTGAGCATTATATTCGGGATTGCGCGATGCATAGTCC AGAACGCCGACGAGAGGTGACAGTGTTTAATAATCGTACATGGGACAGTT GGCGACCACAGATTGAAGAGCTGATTGGCCACGATGCCCTTTATGATCTT TATGATGACGATAAGGAATTGCTTTGGGAATGGAGGTATGTTTTTTGTAC AATGTACAACCTCTTTTACTCGAATGTCTCCTTAACTCGGACAAGTCTGC TGGTCCATTTAGTTACAAATACCTCATAAACTAGTCTCCATAATTCGAAA TTTTCATAACTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGT TCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCACTC GTTCACTCGTTCACTCGTTCACTTTATCAACTCTTGGAACGCGATCGGTT ATCATTCACATTCCAAGGCGTGAAATGTACTTTTCTCAACCAGGTGATTT ACTCAATTTTTCATGTGGAAACTTTCTGGTACTGAAAATTCCGATCAATG CCATAATAGGTCTGTGTATTTTCTTGTCCTCTTTTTCCCTTTCAGAGAGA AATGCTTAGAATTGTATCCAGAATCGTTACCAAAGATCCTGAAATGTGTC AAGTGGGATAACCATGAAGACGTGAAAGAGGTACCTTTACACTCTTGTTA ATGTTAATGCTAATGTGTATATTCTTTAAAGTCGAAAAATGTGTACAAAT CTGTACTAGCTTTAAAGCTAATAGAGTTCGACTGCTAATTTTACAAAATA AATCATTCATCATCATCTGTTAATGCCCAATCACTGACGATTTCTTTTGT AGAGCATTTTGGTTTGTAATTTGAAAATATTTTTGTTTGGTTTTGTAATT TGTGTGTTCAGTTTTGAAGTCGACTACATGTTTTTTTTAAGCATACAAAA ATCTGAAAACAGGCTCAGAGATGCTTAGGTCGAAAACTTAATAAAGCTGA AAAATGCTTGAGGGATGCTTAAGTCCAAAGCATAGATTTAGGGAAATACT GAAAATACGTAAAAGTCCAGCCAAAAAAAGCCAAAATCAGGAAAAAAACA TTTTTCGTAGGCTCAAGTAATGCTTGCCATATGCTTCATTTTCCCCATAT CTGAGCCTAGATATGCTTATAAGTGCAATGCTTATAAAAAAAACATGTAG TTCGCAATGTTGTTTTCTAATTCACCTTAGAAATTCGAACGTTCATTCGA ATCACGCATAGCTGACGACCAGAATTTGAAAACAAGATAGCCAGCTCTAA ACCTGGACACGATTCCTATATATGGGTAGCTCGATCTAGTCAAGTAATTA GAGATCAGTGGGTGCTAAACGTTTTATCGTAATAACATAGCTATATAAGA ACAAGCCTTCGACGGTGGACAAAAAAGTTAAGAACATTTTTGACTTTTTT TGACTCTGACTCTGACTTTAGACAGTGGCATCTTAAATGTTTAGATTCAC TTCTTACTGAATAAATGGAATTTATCACGGATGGAAGTGGAGATTGCTTT GGAGTTGTTGGATTACAAATTTCCTGATATTGAGGTCCGACGTCTCGCTG TTCAAGTACTCGACTCCTTAAGGTAATATTGACAGTTTTAAATTGTGAAT GTGTGTTCCCACAATCCAATTGAAGCGGTAAGCAACTGGAAGCTGAGCAG TGTTACAACTTTTTATGGTAATCCGTCCAGTTGAGATGCAAATACACAAT TCCCGTCTTGTTTTTAAAACCCATTTATCCCTGATTTNTTACAACTTTTT ACGGTAATCCGTCCAGTTAAGATGCAAATACACAATTCCCGTCTTGTTTT TAAAACCCATTAATCCCTGATTTCCATATTCAAAAAGTTGCAACTGGAAG CTGAAAATAGGCGTGAAGTAGGTGCTTTTTTGAATGGAAATTGATGAAGC GTGAAAATGATCAATGGCGACTGACCCTTAGTTCTCTGATATGTATCAAT TACTATGCATGGTTAACCCACCTGGCACACGTTGTTTCAACGTTTGTCAA GCATTATATGGACGTTGTGAACATTATATGAACTTTGAAACAACGTTGTG TGCCAAACTGATAACTATACTTTGTTAACTCTCTTGTTTAATAATCCTCA AATTACTTTCGCTCCTTTTTAGTGATAGCCAACTTGAGATGTACTTTCTT CATTTGGTCCAGGTATGATATCCCTTCCCCCTCCCTTAAGAACAAAATAA AGCAGCATGAGGTTCCTATGAAACTTCTGCTCATTCAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002349TCONS_00002349Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002349-proteinTCONS_00002349-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:1005898..1011586 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.43 5.59 12.78 14.84 31.66 23.94 27.78 30.4 20.29 28.04 16.08 13.18 33.98 27.26 20.1 24.82 21.17 20.48 27.58 38.04 15.17 15.49 12.38 18.14 16.8 16.82 23.08 23.79 15.73 14.35