XLOC_001340 (gene) - C. hemisphaerica

Overview
NameXLOC_001340
Unique NameXLOC_001340
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000020:441087..444471-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001340 ID=XLOC_001340|Name=XLOC_001340|organism=Clytia hemisphaerica|type=gene|length=3385bp|location=Sequence derived from alignment at sc0000020:441087..444471- (Clytia hemisphaerica)
ACCGACTAACTGTTGTTACTGAATCAGAGTAAAAATGAAGTACCACATTA
TAGTGTTATCGTGTTTGCTATGGATAAAATTAACAGGTAATTACAATTTT
TTTGTACAGTAGAGTCTCGAACCTTTATAATTCGAGTGTCTCCTTAACTC
GAATAAGCTCCCTCGTCCCTTACCGTCGTTTCGTATAAGATTCCCATTTC
CTCATTAAGATTCTCGTTATTTTTCCGGGATAACTAGCACGAGATCAGAA
AGGGTTTGCTTGTAAAGGTACGGAAGGTGTTGAAGTTACTCACGAAATTG
CCCAATAGTCCAGGGAAAGTGTGCTAAAAATGAAAACAATTGTCCATTTT
GAGATACATACCATGATGATTTTTAGAATCAGTATGAAAAAACCTTTCCA
ACGGTATATAATATCACATGTTTTGGAACAAAAATAAAAAAGATTTTCCG
GCATGCAGACTGGTCTGTAAATTACTTCCGTAGCTCATAACTCGGACCCA
GTCCATTTTCAGATATATGTTGTGATGTTTTTTAGAATCAGTGTGAGAAA
ACCTTTCCAACGATATATTATATGACATGCTTTGAAGCTTTGAATTTTTT
TCTTGCCTGGGAGGCATTCTGGTCTGTAAAATACACAAACAGGTGTTCTG
GAAGTGGGTCAGAGGCTTAAAATGTTTCTTACCCCCTAAGGTACCACTGT
ACGAAATTTCATGCTTTCTAGTCAAAAACGCACAATTGATGCACACTTTC
CCTGGACTATAACTTTCCGAAGCTTAATTTTCAACTACCCAAAGAAAAGC
TAGAAAAGTGGAAAAGGAATCTTAGTACGGAAATGGGAATCTTATACAAA
ACAACGGTATAAACCTTACTCCGTAAGTAGAATTTTCCTAACTCGAACAA
ATTTGTGTTCCCCTTGCGACTTCGAGTTATGGAGACTCGACTGTATTATA
TATTTTCTAAGTGCTATGGAATATAGTTTTTACAGTCTTCACTATTATAA
ATACTTGGAAGTATTCTTAACTTTAATCTCTCTGTCTTTATGTTTCAAAT
CCTTTAAAAGGCAGTCTGGAGACTTTGGAAATCGTCAGATTCGGATGAAA
TTTAATTAAGCTTGCTCCTTGTGTGCCTTTTTTCATTTTTTCAAAAATTT
TTATCTTTAAGGCCTAGAACGATCTTTTCACTATACCTTCGATTTAGCCC
CCGTTTGTCTGTGTACAAAATAATTTTTTTTTTTAACTTTCAGAATGTTT
TCAATGGGACAATTCAGTTAGTGATTCATCCGTTTATGCTAACAACTCAG
GCTCCGCAATTATCAAGTTCAGATATAGCTATGGAGCTGAAGACCGTTCA
AGTGTTTATATTACATGTGGAATATGGAATACAGATCAAACCAAAATTAT
TCCCATGGTGACTAAAATTGGTAACCAACCTGCACAAAGAAGAAGTGGAG
TTACTGGCGATGTTTTAGGGAATAATGCAGCTCTTTATACAGAATCTACA
CAACCAACTGTTATTGGGTTAAGATTGAGTAATATTGCAAAGACCTTCCC
AACTCAGTACCGTTGCGATGCATCTTTTACTAAAGCCGATGGTGTGGCTG
ATAGTGTCCTAAGTGAACGTGTCATCCTTAATGTCTTAGGTATATATTTT
TAAATACATCGCCGTGTCAATTCAAGACAGACTTAAGTCCATTTTTTCGA
AAATTGACCACAACTCCCCTTTTTCAGCATGCACGCTTTCCAAAAACGGC
CTCAAATCCACAGAGTTCTAATGGTAAAGAGGTGTATTTTGCAATTCAAA
AAAAAGATATCAACGATAAACAGCCTCAGGTCCTAAATTTTAGGCCAAAT
TTTATTTTCTATGAAGCATTGACATGGAATGTGTAGCCTTAAGTCCAAGT
GTTTTGAATTGACAAGGCGATATGGTCTTTCCTCAATAGGATATACAGTA
ACAGTGTTAGTAAAAGTACACATTTTTTTCTTAAGAAAAATTATTGAAGC
CTTCGGGTATTCTTAGCTTTTTAAGTTCTCAAAATGTTATTATTTTCACC
ATTTTGTGAGAATTTTTGTTCGATTTCATAAAAAATTGGTGTTTTAGAGT
TTACAAAGACTTGAAATGTTCTTAATTTGTTCTTAATATTTTGATTAGCG
AAGCCATATGTTCTTATCAAATCTATTCTGATAAAAAAGCGTGTATTGAT
ATAGACGATGTTATTGTCCGTTACAGTGATAGTAAAGGCGGGAAAATGCG
GCGGTATGCGGAAAAAAAATCGGTGGGAGAGTTTTGAAGACTGGCAACTC
TACCGACTTTAAACTCTTTTCCGCAAAAAACTCGTTTGCGAATTTTCTTC
GGTTTTGGGTGGCCTTTTTTCTTAGATAGTGATTCGTCTTAGACTATAGC
ATAGTCTAGCGTCTTAGACTGTAGCATAGTCTAGTATTAATAGTGAGACT
TGCCGACTTAAAAGGAAAGATACATTTTAATTTTGACTGTCATGTTTAGC
AATTTTGACTCAATGGGTAAAAGCCATGACATAAAGCAAGAAATTACTTT
CAAAAAAGTGCTTTGAAAGTTCAAAAGTTGAACTACTCAAAAAATGTTAA
AAAGAAAAGCTACTGTACTGTAATTATAGGAAGGCCAATTTTTTACTTTC
GACCAATATTCAATTAATTTGTCTGTTGAACCATGACAATTGATTTTTGT
CAACTTCAAACAAAATTGAAAAATCAAAATGTGGGCTTAAAATTTTTTAA
AGATACTCCAACGATAAATTGAATGCTTTAAGGCTGGGGAACCAAAAGTT
TTTTTCAACAATGCAACATGCTTCCATCCCACCAACCTGAAACGCTTTCT
CGTGTCTCCACCCCATTTTTCATTTAATAACATTTGTGCTTCTCTCACTT
TTAGCCCAGGGACAAAATCAGCGTGTCTTTTGGATATTTCCCTTACTTTT
TGTCAATTTTGTCCCATGAAACAAAAAAAGAAACCATGAGACACGCACCT
TTTTCTTGTGTTGGTGGGATGGAGCATGTTGCATTGCACCAACGCAAAAA
AAAGGTGCGTGCCCACAAGGTCATCGATTTTTGGATTCGTAATAATCCAT
CCACCTTTATTATTTTATATTTTCAGAACGTCCAAAATTTACAAACTGTT
TGCAAAACATACAATCCAAAGAAACTGTGGCTGGCAACTCACTCGATATA
ACATGCAAAGTCTCTGGCAATCCAACTCCTAACTTGAAATGTTCATTGTT
GGCTTTTGATAGAGAAATTTTAAATACTTTCCCTAAAAAAAATAGTGGTC
GAAATCTCGAGGAAGATGGTAATGATTTACTCACTTTTTTATAGTAGTTG
AGTCCCCTTAATTCGAACAAGCACGGGGAGCTGNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002504TCONS_00002504Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002504-proteinTCONS_00002504-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:441087..444471 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.21	0.22	0.15	2.72	1.09	2.49	4.09	5.3	10.75	16.44	4.45	46.68	21.68	8.21	24.39	4.54	5.85	0.29	0.66	0.07	0.2	0	0	0.14	0.51	4.36	2.09	2.6	1.18