XLOC_001341 (gene) - C. hemisphaerica

Overview
NameXLOC_001341
Unique NameXLOC_001341
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000020:445315..451624-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001341 ID=XLOC_001341|Name=XLOC_001341|organism=Clytia hemisphaerica|type=gene|length=6310bp|location=Sequence derived from alignment at sc0000020:445315..451624- (Clytia hemisphaerica)
ACTTATCGTAAGAGTTTCAACAACGTAGAAGAAACTTCTGAAGAATATGA AAAGAAAATGCAACTTGAAGAACAATTACGTGCTGCAATGGATAAATTGA AGTAGGTGATCATAGTTTTTTTATAAGAACAAACCTTATACAACTAACGC TTCGATGGACGAAATAATAAGATCTAGAACATCCGATTCCTTGATGAATT AATTACACTGAAATACTAAAAAATAAAAATAAGAACCACCTTAAGAATAT TTTAGGCTTAAAGCTCAAAAATTAAAGAACTTTCGACGATTTAAAATTTT ACGTTCTCATAAAAAAACGTGTAGATATCATCCACGCGATAGAGGTTTTT CAGTTTGACTGATTGATCCCTAACTCTTTGACTGGATCGGGTTTCCCATA ATTAAGAAGCGTGACCGGTATAATCTGACTAGTCCGCCATGTTATTTTCT ATACGGATTGTAGACAGCGGGATTTAAATGTTTTGAATTGAAACGTTCGA TAGTCTGAGGTAAACATAGAAATCAGGATGATGGAGTAGTTGATTTTGAA ACTGGACATGTTTCACGGGAAATCTGTAAATAGTTAGCCTATAAAGTTAA GGAATATGATATCTGTGATTTCGTGGCGTCGCGCAATTTCCACTATTATG ATGCCAGACGTTCGATTTGCGTCAGTAATCCCTACAAATTCAAATGTTTG CTTCCATTACGGATCTCCCTTAAGCTGTGTTACTTCGGAAAAAACTTGAA AAATCCCTGTAAAATCATGTCGTTCCAAAATCAAAGAAAACCATTCTAAA AGGCAAGTAGTATATAGAAGTATAAAGGTTTTTCTCCTCACTCATCAAGT GCTGCTCTCTTTTTTTTTGGCACTTTAAAACTTAAAATGTTCTTATTTTG TTCTTATTTTAAAGGACAAAACTTTTGCATTTACTTTTTTATCCCTCTTA TTACCCTACTACAACTTACTTATCGTTTAAATTTAAAGAGTGTACGCTAA AATGAAAATCTTCAGGGTAATTCTTTTCTTGCTATTTTACTTGAGAGATT TCTGAAAAAGAAACGTAAACTCGACCCGTTTTTTTTATCATCGTTATATT TCTTTAGATACAAGAAACGACAAATGAAAGAATTACAAGAAGACCTGAGA GTGATGCAAGCCACTGCTGAATCCTTGACAGTCGATGAAAATGAACTTGT TGTAACCATGGAAGAAAAACAAAGAACTATTGATAGGTAAGAATTGTGAT TTTGTGTTTGTCATTCATTGATTGGTTGAATCGATATTTTACGTGGATGG TCAAGTAAGCTAGGACTTTTTAGGCAACATTTTGTTTGTTTTCATGAGGT CCATGGTGAGCCAACACAGTTATCTGTAAACTGAACTTAAGGGAACATTT AGAGGGATAGCCGACGTAACTCAGCTATCTATGAGCTAAACTGAACGGAA AATTTACGAAATTATAAATCCGACATCGACGGAGCGAGGCCTCGGACAGA GAACCCTTGTTTGTGGCCGTGAAGCTTTATACTAGTCGGTGTAAATTACA CAATGTTTCTGATTCATCGAAATCCCATTTTGGAAAAATGATCAATGTTA TACTGAACAGACTTGATACTTAAAAACACGTGTGTCACAGACCCTGTTGG GACACTGTTCCTCTGAAAAATTTGGCTCCAAAACCACCCCCATCGGTGTT TTTGACCTAGGAACAATTGAATTTCTATCCCCTTGAGATTTCGATAAAAA TCTTCATCCCTACTGTGGAAACAATTGCCACTAGGACTGTGAGACAGGGG TGTAATATTTCTTTTTTGGAATTTTAGCTTACAAAAAGAGCTTGACGTTC AAGAAGAGAAGAAAGAGCGAGCGGACAAAATGACACGAAAAGTAATCCGT GATGTTAAGGGAAGCAGTACTGCATCAAAGAAATCTAAGAAAGGATTCGA AGAAGGTGAGGCGGACATCAAAGTACGAGAACTACGAGATTTTAATAACA GTTTAATGAAGAAATTGGGTCTCATTTGTCGAGATTATCCAGACATTGCC CCCGTCTTAACAATGTATTGTCAACAATCAGGACTTCCGGTTCCTCCATC ACCTGGACCGGGTAGTTCCCGTGGCTCATCGACTACTGGAAGTGTTCGAT CGAATTTGAGTTCAGCTAGGTATGTTTGTTTTTAGCTTCCTATATCTCCG ACCAAAATGTATAAGTTTTGACCGTTTATTCTATGTGGTTTGGAATTTTC TCTGATTTTCTCGATATTTTCGATATTTTCTATTTAAGTACACTTTCTTG TTGACGGAGGCCTTTGCTGATCCGAAATGTGTTATCAACAATTATAGATT ATTCAAATGTTAACCATAGCCTAGCATATTTTACGCAAAACTGCGATAAC GTGCTAAGATTAAAACTACCGAATTATATATATTCCTTGATCATCTGTAA TAATCTTTAGTAATTATTTATACTCTACATTAAACAATCTCAAGGTTTGA TAATAATTTAATTTCCTTAACATACAAGAAATTATATTCGCACGCTTATT ATCCTGTATCGTTTGAAATGTTATTTTCATCTTTGTTTTTCTTTTTCTCA GATCATCAGTGTCGTCGGTTCGAAGTGATACAAGTAGTGCACGACAAAGT CGACAAGCCTTGGGTACCGTGTCTGTTGACCTGTCTCTCAATGCTTTCGC ATCACACAGTCCGCTAGGTAGGTATCATTCTGCTACTCATTGAGTTTAAA GCCAGAAGGGCTGACACACAACGTTGTTTCAACGTTCATCTAACGTTAAA TGGACGTTGTGAACATGAAATTGATGTTGAAACAACGTTGTGTGCTATCT GGGAAGGGCTATAGAAGAATCTGCAACCTTTCTCATGTAAGAAAACGGAA AAAACTTCAGATTTTTGTTGTATTTTGGACAGCCAAAGTCGAACCCAGTC ATTTAAGGCCGGTCTTCACTTACGCGTGCTGCGTCGTACAGTTTGGTTTC AATCCTTTTTGCTTGGAAAAAAGATTACATCATAAAATGTAACGCGCGCT CGAAAAAAAAGTTGAATATACATTTCAACTTTTTCCAACCATTACGTCGC GGATCGCGCCAATGAAATTGCTTCATTTTTTTTTTTGACAAATAGCTTTG CTAGATAAAGTGCGATCGCGATGCGCACAAGTGGAGACCGGCCTTTAGTT CGCTCTTTTATGATTTTGATAGTGCTCACGTCTCTCAGTAAAGTTAAGAA AGTGATGCAAGTGGCTCTGGGTACGAGATTGTTGGACGATGTGTTAGATC TCACTAATCGTGCCAAGCCTTTTGAGCTACCTTTCCAACACTGCTGGGTT TTTTATTTCTTTTTTCTTTATCAGTCTCTTCTGCCACCTTTCCCGCCCGT TTTTCTTCGTCCGCCCTTCTCCAGTCCTTGCTAGGCAATAGGACAAATAA CACAGACCAAATCATACGTTTTTAAAATTCCACAAAAATGCATGGATAAC AAAAATTTTGGTTTCTAATTAAATTATCAACTGCGGCTATTATGACAGTT TAATGATGTCTCTAAAAATGATTAATGATGTAATTTTCAAGTAATTTTAC TACTGGTGAAAGTCTTTGTCAGAATACCGAGTAATTATTGATGAGAAAAG GGGAAAATATTTAAAGGATAATCAGATGGTTTGAAATATTTAAATTTAAA TTTAAATTTTTTGAAAGTAATGGGTTCTTACACGGTTCTTACGTTGAAAT TCTATTGCTTTCATCCTAAAAGCCAAAAATTAGTAACTTAAATATCTCGA CTTTGGAAAATATTTTGAGATTTTGCTCAGGACAATAGAAGGATCCAACA TGTCAAATATTACAAACCATCTGATTATCCCTTTAAAGTTAACCCACATC TTTTCTTTTCTTAAATTGATGATCAGATATGCGGGACATATTTTTGCCTG CAGAAATCACCTGTAGTCCTAAGTAAACATCCGAATATTTTTGCCTAATT ATTAATTTGGTTCAAAACACATTTCTTTCGTTAGATTTCGATTGTTTTCC TACTAAAACTCAAAAAATATAGCTTGAATATCCCGAACCCAGAAACTAGT TAGGCAAAAATATTTCGAGGTATTGGTCAGGACAATGGAAGGAATCCACA TGCCAAATATTTCAAACCATCTGATTATCTGTTCAAAGAATAAACATATT CTTATCCTCAAATTGCCTGTACCAGGCAGCAAAATAATCTGTGAATTCCT CGGTGAATTCATACCCTTAAAGTGCATTTTCTCAAATTTTCAAAAAGCCG TGGTTACACTACATTAATATCTTTAAAAATTTTGAAATTTTTTAATCAAA AATACATTAAAGAAATTAACTATTTTCTTTAAAGTCTTTTTGAAATTTTT GTATGTTGTATCAAATCTTCAATCGCTTTTTCTCAACTCATTTTCTCACT CAACAAACGACATGAGTGAAAGGAGGAAGGCTGCAGCCCGTATTGTGCTA ATTCTTTTGTAACGGAAATTTCAGAGGAAATATTCGAAAAAGAAAAGTCG AGCTTAAAAGGTCTTGCTGGGTACGCAGTTGGTTAAACTTAAAGTTCAGG AACGAAAAAAGTGCCTAAGTACAACAACATATTTGCTGAACTTCTTCGTC TACGTGACCAAGAATAATAGAAGAAGTCTATATCTCAGGATGAACACAGA AACTCGTGGCTGATATCCATCCATCATGCAAAATCTTTCTCTTATCCTAT CTTTCACCCCTATCTCATATTAGCCATATTACAGTTTAAAAATTCCAAAC GCTGGAAAATCTATTCATCGAAAAAATGTACAGAACTATCATGTCGGTGC CTTTGATCTCGAGAGAAGTGAAGAAAAAAACTTTAAACTCTTTACGAAAA AAATGGTAAAGAATCGCAAGAAATGATTTATTTTTCAAGAATTTATAGGT CTTTATTTTCTTTAAAACTGTTACACTTGTAAATTTTTTAATCATAAAGA CTTGATTAAAAAATTTCAGAAATTTTGAAATAAATTAATGTAATGCAATT GTTCTTGGATTTGCTGAAATTTCCACCCTTACAGAGTGCACTTTTCAAAA AGTCCATCCTTACAGTGGATTTCTGCTGTTTTGAAACCTTAACCACCGCA CCTACTCGTCGGTCAATTTGCCTGACTGCCCCCCCCCTCTTACCCAATGG CCACAAACGTCTTTTGGACGTCTAATGTACGTTTCTAGGACGTCAAAGGC CTTAAAGCCGTCCATTGATTGAATGTCCATTGGTTATGAAGGTGTGACTT TTGAAGGGAGAAAAAACTTGCTTTTCTATGCATCTGATGATTATGAAATT TCATTTCAATCAATTTTTCAATCTCAGGAACACCGCCACGATCAACCGCC AGTTCTCGGGCGTCATCTGGCAAATCAACACCCTCTCGTACTCCTTCACG AAGCACTTCCGCCTCATCGAATCGGACCTCACCAACCAAGAAAACACCCA CGTCTAAATCCAATTCACGCCCTCCAACAGGGCAATCATCCGCTTCATCA AGCAAAAGATAGATAGAAACCCGTTTGGTTTTTTTGTAGATGGTGAAGTG TTAGTTAATACCCTCAAAAGACACACTGTGTTTTGGTTTGTGTATATATT TGCCACAAATACTTTAGGCGTACAAACTTTCGCCAACAGAATGAATTCTT TATTCGAGAATCTTCTAAAATCACAATATAAGATAGTCTCTAAAGCATGT TATGTTGCCATTAAAACCCCTCTCAAGGTTTAAGATCAACTTTTTAAATA CATCTTTTCGACCGTAGCCGCCAATCACCGCGCGGGCATTTTTTTGTCCG TCTTATCCCAACCGTCCCAGTCCTTTTTTCGCACCTATAGACCATAGAAA AAATGTTCAAAAAGTATTAGATCGAGTTTAGTGGGATAAAAGTGGTACGC GCCTGACCGTGCGAACGGTCGAAAAGGTGTATTGAATAAATTTAGAACGC CATGTTAAAAATACACTATGTACTGCCATGCAAACATTATGTCTAGGGTT TAATAAATGAAAATTTAAGCACAAATCTTAGAAAGCCAACCTTGCTATTG ATAGTTACGTATTACTGTATGCTGTGTTTCCTGCAGCAGAGACGGTTAGT TTTTTGTTGCACTTTACCGTCTTTCGATTTTGTAGGTCACAAATGGGTCA AGTTGAACATTTACAAGAATTTTTGTCATTGGATTGGTCGTTAACTATTC AAAGAAAAACTTTTATTATAGTTTTCTAAAGAACGCGTCATCTCTATTGT TTTGAATAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002505TCONS_00002505Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002505-proteinTCONS_00002505-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:445315..451624 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.24 3.67 1.47 0.94 8.61 6.51 4.93 5.59 3.11 4.26 3.07 2.71 1.65 1.4 1.03 1.42 2.18 1.61 1.73 1.99 1.69 2.13 2.83 3.12 3.08 2.78 2.41 1.77 1.85 2.14