XLOC_001419 (gene) - C. hemisphaerica

Overview
NameXLOC_001419
Unique NameXLOC_001419
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:446379..451419+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001419 ID=XLOC_001419|Name=XLOC_001419|organism=Clytia hemisphaerica|type=gene|length=5041bp|location=Sequence derived from alignment at sc0000021:446379..451419+ (Clytia hemisphaerica)
GTCCAAGCATTCTACTTCTGACTCTCTACCAATTTTCCAAGCTCACTCAG ATACTGCATGTAATATTTGTAATTTGCCAACAGTGCGCCATACATaaggg attcaaaataacaaaaattacgAAAGAATCAAAAGTGATCGGAAATCCTT CTAACACAAATATTTCTTCGCTAGCTGAAGCCGCAAAACAATGCAATTTA GTGGATCTGAGCAAGTTTGGGGATCCTACTTACACTTTTGCTTTCATTGA TACCGGTTTTGTGATCGGGTTCAGAGTGGAAGTGGAGATCGATGGCAGAT GGAATTTATACCATGGAAAGTACTTGATTAAAAAGGATCATAACATTTTA AAATGTCTACCTGAGGTAATTGATTTGGAAAATGCCTTGTTGATTTTTGA AACGCTAAGTAAGTGCAAACTTTGTCAGGGAAATGATGACTTTGAGAAAC TTATTAATGAAAAAGTTGATCCTAAAGAAAGTTCTTTTAAGGACAAGCAA GGCAATATTAGGGCTAGAATTGAAAATGATAACTTATCAGGTGTGGATGA CCTCACAACGATCCGTGTCAAAGATTGTGAGTTGATGGTGAGGAATGATG CTATGAGGTGCCAGCCATGCATAAAATACCGCCAGTATTTGCATAATACT GTTTATCGGCGCTCAATGAGTCCAGAAGTACCATCCAAATTCACTGCAAA CAAACATCTAACTAAAGATTTTTTGATGATAAAGGCAACTAATCaacaaa aaaagatcaaatcaTTGAAGCGTAGCCTTGAGTCCATGAGAACCTTTGTT AGTCAATTGGTTGAAAGTGAAGGATGTGCTGTAGAGAACAATCTATTGAA AGGTTTGTTGAAAAGGAATTCTTGgtttttatgtttaaaaaaaagtttat taataaaagtttcaattttctttgcttttacCCAAAAATATTCAACTTTT GACTAACCTTGTCAAATAGGTTAGTAAGTTTAGCATCTAACTGAATTATT TCACAAAACGAAGTCTTTACTAAATGCGGGGTATTTTGGGTTACACTTTC TCTAACATGAACAATATTTTCACAACAAGATTCCTCATTTAGACATTCTA ATTGTCGACATATCATGATATTTAATGCTTTCTGTCTTTATACAGAAATA TGCAACAACGTAGTTTCAACAAATGATTCACCTTTTGATGAGGACAGTCC TATCCACTTGCTTTGGGAACAACAGAAAAAGCAGGTGTCATTGGAAAACA AACGGACTATGAGATGGCACCCTGTGATGCTTCGATGGTGCATATCCATT TACCTTAAATCTTCTGGAACATATGAGCATCTACGAAATTCTGGTTTTTT GGTCCTGCCATCCAAAAAAACCTTGGATAAATACGTCAACTTCACTACCC ATAACACTGGATTCAACCCTGATGTATTAGAGAATCTACTTCGATTAACA GAGAACCAGCAACATTTGCATGTTGGTCTTGTGCATGACGAAATGAAGAT AAAATCTGGTATTGTCTACAGTAAGAATTCTGGCAAGATTGTTGGATTTT GTGATCTCGGAGATATCAATAATGAGATAACCTGTTTTGATCGCCGTGTA ACTAACCAAGACGAGCATCCTCCTATTGCTACTCACGTACTCACTCTAAT GGTCCGTGCCATTAACTTTCATCTCAATTACCCTGTCGCCTATTTTGCAG GAGCTGGTGTCAAGGGATATGAACTGTATCATATCATTTGGGAAGCCATC CGAATTTTAGAATTCCTTGACTTCAAGGTATCATACTGCTTGTATACTGT TTATATTATTTCAAGTCTTTTGGTAAATTCGTTTTAAGTTTTACCTTTCC TGCTTGCTTATTACTTTTATAATGTCTTCAATTGAATTAAAttgaatgga attttttttgatttgacaaTCATTATCTGATGAAACCTTTTTGGTGTCTT TTTAGTAGAATTGGTTTGTAAATGTGGAGACTTTTCATATTTCTAGGTGT GGTTTGTTGTCAGTGATGGGGCTTCACCAAACAGGAAGTTTTACAACTAC CACAAAAGAAAGGAAAACATTATTGATGGGGTTGTTTACTCGACGATCAA TAAGTTCGACCCAACTCGtcgaatttattttatttgtgaCGTTCCTCACT TAATCAAAACTACACGAAATTGTGTAGCAAATTCACATGCTCATCAAAAT ACCAGAGAACTCTTTGTAAGAATATCATTTAgtatgtttcaataaaaact caTTAGTGTTTTCCCCCTCTGTTTTGTTGTCTAAATCGAAATACCTTATA ATCACTGGATCAAAATTAAGAAAGGTACTATCATACAATGAGGCTGAAAT TGAGAATgactttgttttattttacatttaaGCTTGATGGGAAAGAGATT AGCTGGCAGCATGTCATTGGACTTTTGGAATACGACGTTGGTATAGATCG TGATGCACCTGGATTTCATCAAACTAAACTGACTGTTGAACATGTGCGTT TGACACCAAGAGCCAGGATGAATGTTGCCTTGGCGGCTCAAGTACGTATT TTTGAGGAGccataaaaatttgatttcagaATTTTAGACAAAACTTTTCA CACAAAACGTTTTAATATTCAGTTGTAATTAAACTGTCTCTACTATTGAT CCCTAGCTTATACACATGTCTCTTGTTTTAGGTTTTAAGCAAATCAGTTG CTGATGCCATGGAACAGCACAACCCTGATGTTACTGTCTCGACCAGAAAA CTATTCCTTAAAATAGACGAATTTTTTGGTATCATGAACGTCAAATCTAC AGTGGCAGGAATTCACACGAACAAAGAAAACTTGAAGCCGTTCAAAAAAC CTAACCCTTTAAAACAAGATGGACGTTTGGATGTAAGAATATATTTATAT GATAATATAGTAAGATAAAGGGCTCGTTATACGGTATCTAAAGAGTATCA ACAAGACCTTTTTCACACCTTTGATAATTATTTCTATTCTTTATTTTGCA GTGGTTGGAGACAAACTTTCTCAAATTCTTGAACGATTGGCAAGCAGAAA TAAAAGCAATTCCTGATGTTGACGataaaagaaaattaagaatGTGCCTT TCCCCTCAAACTCTAACTGGATTACGAATTACTGGTATTTATATTTTCTG CAATCATTAGATGATTAATATTTTAATTTCNAGCAATTCCTGATGTTGAC GataaaagaaaattaagaatGTGCCTTTCCCCTCAAACTCTAACTGGATT ACGAATTACTggtatttatatttatataaaaCTTTTGTCAATCGAAACGA GTTCTTTTTGTTGAAATACAAAACGTAAGCAGACTCAAGAAACCCTCTGA TTTTCCTGGTGGACAATGATTCATCTTATTCCCCTTCCTGAATAACAATC TATTGCATGAAATTACGTTACTGATAACATAATTTCTCTACTTGTTTAGT TCATTCTACAATCAGATTGATTCCGATACTTCTCAAAGAACCGGGAATAG AATTCGTTTTGACCGACCGCTTTAATCAAGATCCAATTGAAGAACATTTT GGTGAGTAAACACATTCTCCTCAAAACAGTAAACTTTCGTTGAGACTCAC CGCTCTTATTTTTCAACACCTGGAATTGCTTTGAAACAAATCTAACGAGG GCTGTTATTGATTGTTCTCATTTTTGACACTTTGAGTCCCTTACACTCAT ATAATTAtctcaaaatattgaaagataTACTACTTTCTTGAAGGTAAGCA AAGAGCAAGACTTGGTGGTTGTGACAATCCTAGCCTAGGTCAATATGGAT CAAGTGAAGGAAAACTGATAACTGCGAAGGATCAAGCCATTCTTGTCATG CGTGGTAACAGTTCTGGTAggaataaagtaaaacaaaaacctCAGATTAA CATTCATGACATGACACCTCTGCCAAAACGTCCAAAAACCGAAcaaagga agaagaaaaaagatgacgatgatgatggtCTATTTGGAAATTTAGCAAAA TGACTTTTTAATTGCACGTAATcaaaggaaaaaattaaaatgataatttt tcttgCTTAAAATCAATATATAATGGATCTTTTAGGGCAATTTGCCATTT CTATCTTTTGTTTCAGTCTCTTTTAATGCTTATTTCATTGCCTTAATTCT TGTACTTTGTCAGCcattttggttttatttttcattagaCTTGNAATAGA ATTCGTTTTGACCGACCGCTTTAATCAAGATCCAATTGAAGAACATTTTG GTGAGTAAACACATTCTCCTCAAAACAGTAAACTTTTGTTGAGACTCACC GCTCTTATTTTTCAACACCTGGAATTGCTTTGAAACAAATCTAACGAGGG CTGTTATTGATTGTTCTCATTTTTGACACTTTGAGTCCCTTACACTCATA TAATTAtctcaaaatattgaaagataTACTACTTTCTTGAAGGTAAGCAA AGAGCAAGACTTGGTGGTTGTGACAATCCTAGCCTAGGTCAATATGGATC AAGTGAAGGAAAACTGATAACTGCGAAGGATCAAGCCATTCTTGTCATGC GTGGTAACAGTTCTGGTAggaataaagtaaaacaaaaacctCAGATTAAC ATTCATGACATGACACCTCTGCCAAAACGTCCAAAAACCGAAcaaaggaa gaagaaaaaagatgacgatgatgatggtCTATTTGGAAATTTAGCAAAAT GACTTTTTAATTGCACGTAATcaaaggaaaaaattaaaatgttaattttt cttgCTTAAAATCAATATATAATGGATCTTTTAGGGCAATTTGCCATTTC TATCTTTTGTTTCAGTCTCTTTTAATGCTTATTTCATTGCCTTAATTCTT GTACTTTGTCAGCcattttggttttatttttcattagacttatatatgta taagaattttCAGTGTTTTCAGGAACATTTCGAACCATTAATTAAGAGAC TAGCAAACTATGAATAGCACCATCaagatatttttttgctttcacataca aaaaatacacattttttataagcaaccgagttgctaagggc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002619TCONS_00002619Clytia hemisphaericatranscript
TCONS_00002620TCONS_00002620Clytia hemisphaericatranscript
TCONS_00002621TCONS_00002621Clytia hemisphaericatranscript
TCONS_00002622TCONS_00002622Clytia hemisphaericatranscript
TCONS_00002623TCONS_00002623Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002623-proteinTCONS_00002623-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:446379..451419 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.4 1.61 0.51 0.3 2.69 2.3 2.08 2.61 2.05 2.43 2.5 1.73 1.55 1.43 1.89 2.69 2.96 1.93 1.21 1.41 1.81 1.49 1.72 1.67 1.62 1.72 2.11 2.25 0.77 0.78