XLOC_001426 (gene) - C. hemisphaerica

Overview
NameXLOC_001426
Unique NameXLOC_001426
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:603228..607404+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001426 ID=XLOC_001426|Name=XLOC_001426|organism=Clytia hemisphaerica|type=gene|length=4177bp|location=Sequence derived from alignment at sc0000021:603228..607404+ (Clytia hemisphaerica)
CGATCGAGGGCGCTTATACCGACTGCAGAGTACCGCCCGTTATCAAGATT
CCAAAACTCGTCCCAGTTTCCCTTTCATTCTCTGGCTTGGCGCCAAACAA
GATGGCGATGGTTGATGCATATCTCTTGAAATGAAGGGAAGAATCACACA
GTTAAGTACAAGTTTTTTGTCTGTTTAGAGCAATTCTCTTTGTCCATGTT
CTGTTTAATCCTATTTCTTTGAAGTAATATTTTAATACAGTAGAAACGTC
TTGGTCTATATAGAAAATACTGGTGTCCTGTCTCTAGTGATTTATTTTTC
TGAAGTTTATTTTCTATACATTTGATTTTAACTCGCTTTCAACACACAGG
GTACAAGTTGagctgaaaaaacaaaaatttctttcaacagGTTTCTTTAA
ACAATAAAGCTTGGGTTTCAAGTGAATAAATTTTTGAGTAAAAATGtaat
tttcattgtttataACTGTATAAGTCAGATGATGATGGCTAGTATATATT
AGGGTTTACGACGaatgaatttgtggaataaagaattgattttaaaccac
ttagtcagatacgtgtaagttttaatttttctctgggtctacacatttgt
tgtgtatgtggcatcttttgataaaacttgAGACctgttttcataaaaaa
ctttactaatggctagtttatgagtttacgacaaatgaatttgtggaata
aagaattgattttaaaccgcttagtcagatacgtgtaagttttaattgtt
ctctgggtctacacatttgttgtgtatgtggcatcttttgatgaaacttg
agacctgctttcataaaaaactttacatatggctagtttatgagttttac
aacaaatgaatttgtggaataaagaattgattttaaaccgcttAACCGCA
TACGTGTAAGTTTTAATTGTTCCCTGGGTCTACACAtttgttgtgtatgt
ggcatcttttgatgaaacttgagacccgctttcataaaaaactttactaa
tggctagtttatgagtttacaacaaatgaatttgtggaataaagaattga
ttttaaaccgcttagtcaggtacgtgtaagttttaattgttccctgggtc
tacacatttggtgtgtatgtggcatcttttgatgaaacttgagacccgct
ttcataaaaaactttacgtatggctagtttatgagtttacaacaaatgaa
tttgtggaataaagaattgattttaaaccgcttagtcaggtacgtgtaag
ttttaattgttccctgggtctacacatttggtgtgtatgtggcatctttt
gatgaaacttgagacccgctttcataaaaaactttacgtatggctagttt
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCACAtttgttgtgtatgtggcatcttttgatg
aaacttgagacccgctttcataaaaaacttttacgtatggctagtttatg
agtttacaACAAATGAATTTGTAGataaatgaatattttgaaactattaa
ttcaataaatattttcatgttttattggacTTCTTTTTTGCAAATACATC
TTATGACAAAACTTGAAATAGCATGGGGGTTTGAAGATAGATCATTTTGA
AGAAGGACAATTGATGTAGGTGTTGGGCTATTTCTAccattataaagttt
tttgcatTGTCTGATGCTGAAAGACTTTGCTTTCTAAAGTgacttataat
tttttttacccattttcagCACTTCAATTGGATGGTACATTCACTTTGCT
GGCTCAGAATTAGAGCTGTAATTCCTAAAAAGtaagacttttttaatttt
tgtcttttcaCAATAAAATCTTATATTCCTTTCGAGAACATTGCTGTTTT
TCTTTCTAATGTTTAATTTGATGTCTATTTCTTTTACTGTTTAAGtcttt
aaagaaagtttttgtaTGATTTGGATAGCTATTTTATTTTCCAAGTATAT
AGATGGTAATCaaacttattaatttttttataggaGCTCCTTTGACGATG
CTTGGGTGAATTGATCAGACAATATGGAACTCAAAATGGATGAATGCAAT
ACTACAAATGGAATAACAAACTAACAAAGTTGGTGGACTATCATCTTTTT
CGAAATCTTGACGAACGCCAAAAACTCAGAAAGTTTTTCAAGCCACaacc
aaaagaaatcttttttttaaatgacaatgAATTTTATCCAATTCGAAGAA
GTCTTATTTTATTACCTTTTTTGCATTCCACAATATTTCTACTTAACCTT
TCCCACTCTTTTGTGACTTTTTTCAGAACGAACTTCTGAATGAGATGTTG
GCAACTCAAAGGCGAACCAACATTCTCCTGGGCCAATTGATTgcaaaggt
aattttttttcaatttctcaaaaCAACTGGACAACTTTTTTACGCAATGA
TTTAACACAACTACAAGCACATCCACGCTTTTCTAACTTGAACCTAGATA
AATTTAAAACATGCATTATTTGTctgttttttgtaaattttgcggCAAGA
TAGAACATTGGTGTCACCATTCTTTTTTAGGTTTCAGAGCAACCATTACC
TAATGCAAACCCAAACCTAAACCAAACACAAATGGCTCCTTTAGATGAAA
ATGACTTTGTAAGTATCATTTtaacttctttgtttttaacTTCATATCCA
CTGAGTTTTGAATacttaaaagaaaactttttggattaaattcccgtcaa
attttgttttcatcatCAGAAGAAACTGCTAAAATTCTAAAGCTCTGTTA
CAAACTGActtgataattttgaaaaaactcttGAGAAGGAAAGAAAGACT
TAATTTGTTTTGAGCGGGAGAAaattataattgtaaaatttacatttttt
ttagtttgaataattttttgagagagACAATTGTATCCTTTATCCTATCC
TTTATTTACTCTCTATTTACTTTATGTATTTTAACCATTATTATTCTAAA
CCAAATTACCGAATTACGAAATCAAAAACAAACACTTTTTTCGAACATGT
ATATAATTTTTTCATTCACACAGCAACGCAATTTTAATATGCAACTTTTA
GCTtacacaaaggtttctagataACTAAAATGTTCCTTTTCGTTgctttc
attactttttgctttatttccaATGTCTGAGTGTCGCCGTGCTAGATTAC
ATTTAAGTACTGTAGTGCGGTTGTACGGTTGTCTAAAGcaataaaattgt
atttttaggtTCTGGCAGATGGCTCCAACTTGTTAGATGTGCCGAGACAT
AACACTCCTACAATATATGCCATTGCCTTGGCTAAGGCGATGTTTACGAC
GGAAGAACTTGAAAATGGCATGGTCTCGCCTAAAGCAGGCAAAAGGAAAT
CGAGGACTGCATTAGATCCTAATCAAGTCAAGAAAATAAAGCGTAAATTG
AATTATTTCATCCACCATGGGTTGACAAATACGATTTAActtattttcaa
ggttttttgctgttttataCAAATAAGCCATGTTAAGCCTGGGAGCTCCT
CAAAAAGTTATgccttgtttttgtttttttgccatAACTTTCAACTAGTT
GTGatataaaaaatttaaactttgtttcaaaaaattggCAGTCCGCACAA
TTTTGGTTCATTGCTCTTGAAGGGAAAAAGACAAAACCAAAGGTAGCAAT
ACCTTATTGAAAAGACAATTTTGAATGGTAAAATCTAAGctttaaatact
tttttaaagaattcgaaaatgaaaataaaaacttcgAGAGCAATCAACTA
AAATGTGTGgactgtcaatttttttgaaattcgttcatataattttttta
tactttttttacagGATTGATTCAACACCAATATAAACTAGACGAaccaa
agttcaaaaaaatttggccTCATTGCCGGAGGTCCATCAACCAGGGTGGA
AATGACGCCAAAAGAAAAGCTGACGTTGAAGCTGACGTTGAAGATGAGAT
TCGAGAGaataattaatttaaaattaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002635TCONS_00002635Clytia hemisphaericatranscript
TCONS_00002636TCONS_00002636Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002635-proteinTCONS_00002635-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:603228..607404 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.56	8.11	1.91	3.04	26.45	19.86	19.63	17.59	17.79	12.96	14.68	19.07	13.12	15.14	22.79	18.18	33.14	32.43	11.17	12.55	59.06	51.68	26.69	28.5	4.84	9.06	21.82	14.68	13.37	11.1