XLOC_001427 (gene) - C. hemisphaerica

Overview
NameXLOC_001427
Unique NameXLOC_001427
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:617917..622719+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001427 ID=XLOC_001427|Name=XLOC_001427|organism=Clytia hemisphaerica|type=gene|length=4803bp|location=Sequence derived from alignment at sc0000021:617917..622719+ (Clytia hemisphaerica)
CTTCATACCACTTCGGCTTCTTGTTGCTTATCGTTTTCAGTCAAGGTTTT TGTAttaattttcagataaaataaagttttaaagatGTTGGCGTTGAGAA GTTTGTTGGCAATTTTGACGAtcacaacaaatttgttttctaCATCCTTT TCATCTATCATCGATGAAGAAGCACAGAAGATAAAGAAAGCAGACAATCA AAAAACTCACCCAAAGATATTGGAATTCAACAAAAACAGTCAAAACAGAC CAACAAAATGCCAAGGTCAGTATAGAATTcagaatgtaaaaaaaaacttt ctacgCTACAGCCATAAAAATAAGGATACAATgcactctcgcttattcga aattttattattcgaacctttctttaattcgaacttgtttccagtccccA CCAAGGAGAAAGCCTCTTAAAATACTTACGAACTTATTTGAATTTCTCTT TAATAAAACACACAAGATTCtccgttcgagttcgaaatagcgagagtcaa ctgaaCTCCATTAAAGACCCATAAACTTTGTTAGACGCTTGTGGGTTTTA GTTTAAGTTCAAAATTTTCCGAACGCACCCTCAATACAAGGTGGTCCCAA TCTAAATACTTACGCTGGACACTTAAGAAAAGCGACCTACCTAAGGTGCA GCCCTTAAAGGTACTTCTTTGCAGTGTAAGAATTGAATTTAAAAGCCCAC CTCGGGTTTTTACCCACCTACTTCCGATACCTAAAATATCTTTATCAACG GAATCTCTTGCTAAGACTATTGGAAATAAAATCAAATTGTAAACAATAGA TTGGGCTAtcccagaaatagtctgtatcCCCCATGTCGAGGAAGTGTGAC GTCCAgtgtggtctggaaaataaaaaaacctaaggggtctggtttttcga gtgtaaaaatccagtgtggtcagtaaaatgagttggaaaatccagggtgg tcagtaaaatgagttagaaaatccagggtggtcattAAAATGAGTTAGAA AATCCAGCGTGGTCAGTAAAACGAGttggaaaatccagggtggtcagtaa aatgagttagaaaatccagggtggtcagtaaaatgagttggaaaatccag ggtggtcagtaaaaagAGGTAGAAAGTCCAGGGTGGCCCAAAAAAGAGAG gagaaaaaatccaaggggtcttgaaaaattgaaataaaatccaGTGGGTC CAAAAGAGACCTCTTCAACATAGGGGTACAAGTTTTTTCTGAAATAGCCT TACTGGTTTTGGACTGATGAGCTGACTCGAAATTGCTTGTTTTCATTTAG TATGCCGTATTATGGTACACGAAATAGAACTGGAGTTGAATAAGACGAAG AAtagcaaacaaaaaattcgttTCAGTAATAGCTTGGAtggaagaaagaa agaaaacttaTCTTACAAAACTTCGTAAGTTTGTTTGCTTGTCATATTCT ACATCTACGGTGCCATTTTGGAGAACGACCACCCAGCTTTCTGGTGTCAG CTTCAATGGATACATCAATAATGTCTTGTGATGCCATTAATAGGATCTAG AATAAAAATAATCATTGAAATTATCCTGTTTTAGTAACTCGGTGAAAATT TTACAGTCCGAAGAAGTAAAATTACGGAGCTGAAAGCTTGAACCAATGGG GATTTCCAAAATAATTTTGTCTTTTCTAGTGAGGAAGAGAGTTAAATGTA ATTTGAACTATAATGGGTAAAATTTTagttatttttccattttttccaag TGTATAAGACTTAAGGTGGTCAATTCATCTtggcttttcaaaaaaaactc tttaaaactttttaccccctagaGAGTTGAGACTCATGGATGTTTTGGAC ATGGTATGTGGAAATGTGGATTACTATCGAGTCATTGCTGGTCCACAATT CCCTTATCTAAGGAACGGTAAGTCATGCAATAATTTAAtacctaaatttt taatatcTAGAATGAGGCTTTGTGTTGCGAGAATCTCAGTAATTCGACAA TAAGACCATTCACGTTCATGTCATTCATAAGACAtattcagacgttacgg tttcgtatgACTCCGGTATGGTTTCCGTGATTGAGTGTGTTCTTATTAGT tttggaacgtttcggagcaagaaaatggAGCAGTTCCATTCCGATGAAAA TTTGTAACGTCTTCGTTTCTAAACGTTTCGagtttgacgttcacacttgc gATACGGAACTATAACGTCTGAACATATAGTCTAAGAGAATGGTCCTCTC TCCGTGTAATTGGCACCTCAAAGATCGAAATAGAGAGAAAAGGTTGATAA GTCATTGGCGCCTTGAAGAGTGAAGTGGAAAGAAAGGCTTAAAAAATGTA TCCTTTTGACATCCCACGTATTTCAGAATGGATATGAAGGCATAACATTT TCCAGTTTAAATCCTTCAGTACTTTAGAAAACTAAAATTTAAGGACTTCT TCAAAATCACGGTGCGTCAACTTCAAATACAATTTTGGGTCAAGTTTGGG TGCGgtggaaagctcttttcaagATCTATCAGCGTGCTGCTTTATGTATT AGGTCCTAAATCAAAATTACAGGTAGCCGGAAGAAtcattcaaaatgaaa gaaatcttttcttttgatGGCTGACTACGagtaaatgttgtttttttttc agtgaaaaGTATGTATAGAATCGAACTTGAAAAGGCGATGAAAGAAAGTG GTGTTGGTTTAACTTTGGACGCTCCTCCCCAGACTGTTGATGACCCGACC GCTGAAATAAAACGATTGCATTTCGAGGTATTTGATATTCACCATATAAT CTTGAATCTCTTCATGTCTCGTCATAATTTTTTATCCAAATACGACGAAT TAATTTTAAGTGAGCTCGCCAGCCAAGAAAAATCAACCAAAGATTAGATA AGCATTATTGATATGTTACTTTGCTGGAAAACCAAGTTCAGTTGACGCTC TATAATTCGATTTGCGAGGGGAAtctgattttcatcgaataagagagcat atcgaatagtagaacgtcgtatttgagagtttcttgttaacAGGGACTtt cgattttcatcgaatagtagaacgagaaattagagagcgtcaactgtaat atTATATTACTTTAGACAGTCTACGATTATCGATTGTTTTTTATGTTATT ACAATAACCGCGAAAACCGGCAGTTATCTGTGAACAGAACAGAACAAACG AATAAGGAGGGGGTATtcaaagggataatcagatggtttgagatatttag attaCAGAAACCCTCTGTGGTCCTTAgtaaaaagtatttttgtgtaacaa tttttcattttgaaaatgggttctgacacggttcttacgttgaaattctg ttgttttcatcctaaaagccaaaaacttgtaacttaaatatctcgACTTG AGGAAAAagttaggcaaaaatattttgagatttttctcaggacaatagaa ggatcccacatgccaaattaaaaaccatctgattatccctttaaagcaTT TGAACCAAGATATGGCATTTATTCAAGATATTGTTACAGTTAGGCTTGAA AACGAAAATTGGTTAACaaaattgactttttgaaatCCCCATCGCATTTT CTTCATCACAGTGTGTTCAAATGGTAGAAGAATATGAAGAAGAAATATTA GAATGGTTCAAAACTAATCAAGATATCCCACCAATCGATTACATATGTAG AGAACGAGTGTTGCAACATGGCACGAAAGGTATGTTGAGAAAGTTCGGTT gggacaaattttccccaaaacttactattcgaggattagccataaattta tgccaaacttatatctaccAACTCACACTTACGTCCGACTACCtgattgg tttctacccctaatctaggccataggcaaatggaaagcTAAATTGATTAC ATATGTAGAGAACGAGTGTTGCAACATGGCACGAAAGGTATGTTGACAAT AAGTTATGGGTCTTTAGATCTTATACTCTCTCCAGCCCACTGGTTGGTCC TTTCCAGACCCAACCATTAACCTTTCATAACTTCGAGGCTAGCGCCTAGG AGTTTTTGTATTACATATTAAGAGTACATTTTTTCAGTTCAGAAAGTGCA AATCCATGGATAAGTGATAATGATAAAGTCAATTTTACTGATTAGTCTTA AAAGAAAGACGTCTTTTACTAAttgtgaaaaaagatttaaGTATTTATCT AACTAATCAAATGAAGTctttcataaaaattcaaacatGGAATGTTCAGt gattacacgtttttattctttattagaacccagtttatatgACGAACATt cgttgaaaaattaagaacatcgtaagagcATGCCCAgtctcagtttggaa aaaaatgacaagaaactacaattttttcctcttttcaagcagttttaacc gaacttagggatgaATTTTCTAACATCGAGAGTctaatattgtccaaatt ttaccaattttaagtgctctttattttgcatgatattgtcaatttagagt agtctgaaaaattaagaacacgtttaagaacattttaggctgaaaactgc caaaaaaataagcatatccaggctcagccaaattttagatgttctaataa aaaaaaaaacgtgcagcAGAATCAACACTTTCTcaacttttttattattt ttatagaTTGTCTGGATGCGACAACAGAGAGTCCCGAATGGGGAAGTCAA ATCGTTAAAACCACTACTGATCAAGGAATATATAATCTTCTAAAGCATAG TAGGAGTGAGCTGTAAATTTTATCATTAACTATTGTAACTTTAGAATTCC gat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002637TCONS_00002637Clytia hemisphaericatranscript
TCONS_00002638TCONS_00002638Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002637-proteinTCONS_00002637-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:617917..622719 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CNPY4protein canopy homolog 4 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 1.51 1.54 6.79 7.51 0.94 0.78 1.3 0.46 3.62 2.73 2.18 4.52 13.26 11.58 1.93 3.74 18.88 19.78 7.28 6.28 9.51 12.37 1.61 0.55 0.41 0.42