XLOC_001436 (gene) - C. hemisphaerica

Overview
NameXLOC_001436
Unique NameXLOC_001436
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:1009995..1017495+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001436 ID=XLOC_001436|Name=XLOC_001436|organism=Clytia hemisphaerica|type=gene|length=7501bp|location=Sequence derived from alignment at sc0000021:1009995..1017495+ (Clytia hemisphaerica)
caCGGCTTATTAAATTTGCTCAATGGACCGTTTTATGGTTCATTGGTTAT GCcattaaaatattatttgatcATCTTACCTTCTGTATAATACCTGTTTT TAACGAGATCCATTcgaatttcttcactttcaaaaaagtttaatttctta ACCGCTTTGTATCTTCTTCGAGCCGTCTTGACGAATCTGGTATATTCGAT TCCAAGGTATTTGCTcatcatattttgatatttttacttGAGAATATTTC AGATTTCATTTTCTCACAATACTGGTAGATTATGAATTGGAGATGTATCG GAATAAAGCTTGGTTTNTCATTTGCTCACAATACTGGTAGATTATGAATT GGAGATGTATCGGAATAAAGCTTGGTTTCCaatatcttttttaatttcaa ggaaaaaatcttttgttattGGATCGGCCATTTGTTCTGATTCAATATCT TCGAAAACATCACAATAGATCTCATACATTGCCTGAAATGTATCAAAGCT GAAATCAGGGTATTGGTCATGATAATCTAGTAAAAGATAGAAAGATTATT ActaagaaaacatttttaataatgatattctcttttattttctttacagA TGGATAAACGATTTTTGATCTTACTGGTCGCCTTCGTGGCATACACATCC GCTAAATCTGTTAGCCGTAAGTAtcttattttattcattttcaaatacag ttgacgttctactattcgatgttctactattcgataggcttccttattcg atgaaatttatagtccccgtcaacaagaaattatcataaacgacgctccc ttattcaataagctcccttattcgatgaaaatccaagtCCCCTtcaagat cgaattagagagcgtcaactgtacctAAATGCAAGAAATTCCTCTTCTTA TTCTTGCTTTATTCCCAATCTAAAAATGTTTTGGATTTAGCGCGTATCGA AAGACAACAATAAATCCCACAAAGTCGTGTACAAATTCGGATATTTGCAG CGAAGAAGATATTGTACTTTGATGCAATATTTTAAAGTTGCTTTTACGAT ATTACGATAAGAATTACGATATTCATGGCTATTTTGCGCGCATTTCACAA CATTTTTGGATACAGGATTTATATTACGcacgaaaaaatttgaatataat tcgAAAGGACTCGAAAACTTAANACAGGATTTATATTACGcacgaaaaaa tttgaatataattcgAAAGGACTCGAAAACTTAAACTAATCTTACATATC TCCGGAGAAACCTTCCTTACTCAATTccaaaaaatccaaactttGTTATA TGACAGTCATTACAACTTTGTGTGAAAGAGAAAGActtttgttccttttt tcacaaaaattattGAAACTGCATGATGAGTCTATATAATATCCATTTGA CATAATTTATCTAAcacatatatatatatttatagCATGTTAGATATTAT ATTGTTGCATGGTTAAATGCACCTCAAAATCTGATTCTTTTGGCTTTAAA CTGATAGAAAACTATATACCTATACACAATCATTTTATACAAAAACATGt acagcaaaaatttcaaaacaatctgCTTTTAACCAGGAACAAAATGGTGA CTCTGGTTCGATTTCATTGGATCATCATTTCATAGTTATAAACAAGCAAC TTGCTGAAACAGGATGTGCCGCCACAACTTCAAAAATACTTACTAAAGTT TCANTTCATTGGATCATCATTTCATAGTTATAAACAAGCAACTTGCTGAA ACAGGATGTGCCGCCACAACTTCAAAAATACTTACTaaagtttcaatatt ttttttggaaaagagaattaaaaaaagagcTTTACTCTTTCACACCTAAT GGACATAATTTATTGTTCCTTTTAGGTGTGAAGAAATCTGCTAACCCATG TGGCTGCACTCCTGCTCCAGCTTGTTGTGCCccaccaccacctccaccac cagcCCCAATGTGTGCATGTGCCCCAGCACCAGCCCCATGTGGTTGTGCC GGAGGAGCCGGTGCTGCCCCACCAATGCCAGGACCCCCAGGACCGGGAGG ACCACCCGGAGCCCCAGGAGGCCCAGGAGCTATGGGACCCGCAGGACCTC CAGGACCCCCAGGAGCCGGAGGATGCGGAGGACCACCTGGACCACCAGGA CCACCAGGACCTCCAGGAGCACCAGCCccacctccaccaccaccacctcc AATCTGTCTCCACCATTGTATGAAGATCTGCCCAGTCAGTGCCCCTGCCT GTGCCCCACCACCACCAGCTTGTGCCCCACCACCATGCCCAGCTCCACCA CCATGTGCCGCTCCACCATGTGCCCCACCACCACCATGCCCNGTGCCCCA CCACCACCAGCTTGTGCCCCACCACCATGCCCAGCTCCACCACCATGTGC CGCTCCACCATGTGCCCCACCACCACCATGCCCAGCACCTTGTCCACCAC CAATGCCATGTGCTGCTCCACCATGCCCGCCACCTATGCCATGCCCACCA CCATGTCCACCACCTTGCccaccaccacctccaccaccaaTGTGCACCTG TGGGCCACCACCATGCTCCTGTGGAAAATAGAGTGGATAATAAAACGACG CATTATTGTTAATAGATGTTAAATGAGTCATTTAAGCAAATCACTTTGCt tgatttcaatttcaacaaaatcaaTCTCCAGAAGATACTTTCCTTGAGGA ATGAATATGGAGATCTTAACTTTTACGTTAAGAAATTTCCTCATAAGATT TTTCTTATGTATAATTTCAATAACTATACTATGAcacatatttttataaa taaaagaatctctagaaaattataattgaattgaaaatattttctgcaTT TACTTAACGATCCTTTCCAATCAATTTCTTACGAAGGTCTGAATTTCTAG CTCTCTGAATAAACAATACATTTTTCCATAGTTAGGATATTTAGGGTgca ttaaagtctattcacgataagtgggcactcttttttcttttacctataac ttttgaaggaattcttcaatctttaaacATTTgctatcgttggagagata tttgtgagtggaacaattttaaataaaaaagtctttaaaaaaataccaaa aaacgaagatgaaaatgaagaagaaaaaaatgaagatcttttagagaaat gctataactttcattttcacttgagaggttctttgatcttaggaggtcat cactgtgaagaaattttactaaaatatttattcaatataaagttatgata caaagttaataagtgattgaccccaaaaaacagcagataacagcagaaaa cagcgtttttagacgtcaatcagcttataactttgtttgatatcttttcg ctgaatgattatttttgatacattttttcacagtgatgacgttcgataat caagggttcacttcagtgaaaatgagagttatagcacttttctacaagat gttcatttttttcttcttcattttcatcttcatttttagaatttttttaa agacttttttatttcaaattgttccactcacaaatgtctctccaacgata cccaatttataaagattaaagaattccttCGAAAgatataggtaaatgaa aaaagagtgcacacttatcgtgaatagactttagtttcgtattcatttga aatcaaaaaattacacTCCTGTCAATTTTACGCTGCAAGATTGCCAGATT TAAAGTCATATGCAACATATTTGGATTTTTCAATTTGCAAGTTTTAagta tatttatttataaattttgaaCTTTAGAAAAAAGCATGTTAGTTTTTCTc cccaatagaccttttcataaattacgtcatgaacatcacttgcctcgttt tgaaattattgccatggtgattaagtCCCAGTGGATTattttaaaactac tttctatttataaaaaaataatttgatgtctAAAGGGATATAATTACCat agtaattgtttgaatacgaagcaagtgatgttcgtgacgtaatttataaa aaggtctattaaataGAAATTGTTTTTACTATTATATGAGGCATGAAAAG TAATGAACAATGCACGATGTATGTAAAATCGAATTCGGTGATCTACGCTC CTTATCAAATACtcttaaaaaactttaaacaaaaattgaaacaaaaattg aaaaaaaaaagatttagcatcaaatattttgattttttaattttctactt ttcatcGTAGATGGAGATAAACGATCACCCTGTTCGTGTTCAGCACCGCC ATGTTCATGCCAAGAACTCCCAATGCAAACCATCACTATCCCAATGGCTG CCCCATGTGCACCACCAGCCTGTGCCCCACCACCACCAGCTTGTGCCCCA GCATGTATGCCAGCATGTGCACCAGGATGTGGTGCCGGTGGAGCCGGAGC CGCTCCACCACCACCACCACCACCACCAGTCCCAGGACCACCAGGATCTA TGGGACCAGTCGGACCACCAGGAGGACCAGGAGGCCCAGGACCAGCTGGA CCTCCAGGACCACCAGGAACCCCAGGATCAGGAGGTCCACCAGGACCACC AGGACCACCAGGACCTCCAGGAGCCCCAGCTCCACCAgctccaccaccac caccagtCTGCTTACATCACTGCATGAAAATCTGTCCAGCTCCAGCACCT GCCTGTGCGGCACCTCCACCtccacctccaccaccaccaATGTGCACCTG CTCGCCACCACCATGCTCATGTGGAAAATAGATTTCtttctaaaatcaaa tttaGAGACACTCTGTTAAAATTGACTATGATAATATTACTCAATCTTGA GTTCTATTCCTTTTATGGACACTGCAAACTTaataaattctatttttttt gatgttcgtaaaattgtaaatttagatattttttgaaagaattataCTTC CACTTTACACATTTACAcataaacaaaatctttctcAATTTAGCTTGGAT ATTTCCTTGATTAGTAAATTTACGTATCCTTTATATTTTGCACGATTGCA TGAAAgtattttggctgaaaaagtGATCAATCCATTAACCCTGGGAAGAG GTCTCAATATACTGCAAGTTAGGTAAAGTGAACTATTATAATTGTGGCCC TTAGAGTTAAGTTTTCCAGGCTTCCCAAATTTCGTTTGATGAGTCAATAG GAGGGTGAGGGTGCAATATTGGAAAAGGTAAAACATTTAGATAAAAGCAA CtttgaacaaaaacaaaaaccaacaaaaatcTGACAATGCTTACACTTTA ATTGacaaaatttcaactttaaagtcaatattttgtttaaaattagctaa atgttttgtttgcacacataaagtcattttaaaatctcataaaagaaatt ttctctgaacttcaaactttcaaaaattataatacATCTTTGTAGACATT AACGTTTAGGTTCTCCTACTTATATCTATCGACCCTTTGCACAAAACGAA CTTTTGTTAGTTAActagtgagacaggggtgtatgttCCTCTCCCAAGTG ACAAAAAAGCTAAAGTATAGTCGCGACTTTGGGATTCGGATTCTATATTG AGAAAATTAGGCATAACTTATCTTTCTTTTATCCTAGAGTTGAAGAAAAG ATCTCCATGCAGTTGCTCCCCACCACCATGTGACTGTGCTATTAACCTTC CACCACAAGTGATCAGTCTCCCTGCACCACCAGCACCTTGTATGCCAGCC GGATGTGCCGCAGGAGGAGCTGCAGCTGCTCCACCACCACCAGGACCACC TGGACCAGCTGGACCACCAGGAGCCCCAGGAGGCCCAGGAGGACCAGGAC CAGCAGGACCTCCAGGAGCACCAGGAGGTGCTGGCTTTGCAGGTCCACCA GGACCACCGGGACCACCAGGACCTCCAGGAGCCCCAGCTCCACCAGCTCC TCCACCACCACCAGTCTGCTTACATCATTGTATGAGAATCTGTCCCGCCC CTGCACCCGCCTGTGTAGCTGCTGCCCCTGCTTGTGCTGCTGCCCCGTGC CCACCACCACCACCTCCTCCTCCTCCTCCTCCTCCCCCACCTCCACCACC ACCTCCTCCACCTCCCCCAccaccaccacctccaccaccaccaccacctc cATGCCCTGCTCCACCTTGTATGCCCCCACCACCACCAGTCTGTGCCTGC TCACCACCTCCTTGTTCATGTGGGAAATAACCTCAATGACTTGTTAATGA ATTCTTATTCTATTTTGTAGATATTGTAGATTTTTCTAacgtaaaatttt cttttacaatACAAAATATTACCTataataaatcataaatcaattGAAAT TTAGACAATtcctaaaaatcaaaaccaaGTATCCTCGTATATTTcttgaa caaaaagttttaacatAATTCTCAATAAGAATGTCACCGTTATAGTGATT CTTCTGTCACTAAAGCACATTGTCGTTCTGTTTACCGAAGCAACTTTCGA ACCATCCTAACATGCTCCTTTTTAGCCTTGCCAGCGACATATTTCCTTCT AGAATTAGATTTTTCACTGTACGCAACTTGCACGATACTGCTTCCCAATG ATCTACCAAAGTGGGTTTGGGAGAGGTTAGATACACTGATTTCAGTAACA AACCTTGCGCGTTGACGCCGGATAGTTTGTCCTTTTGAACCTATTAGATA ACCAGCACATTCACCAGGGATATATAATTTACAATCTTCCTCGTTTACTA cactattttcaaaacattgatgGATAAAGGCTTTCCTGAAAGCTTTAACA CCTTCATCATCAGCATCTACGTGATTTTCATCCACTTTTCCTTGTTTTAA CTTGCCTTCGAATTCTTCACTCCACTCGACCCATTGCACTTCAATCTCTT TCAGCAGTAATACCTTGAAGAGAAACAATCTTCGATTATCACAAGTATAA AAACAGCAGCCTGGATTTTCCATATTACCACGAGTTGCGACTCGTATTCG TGGATATTCCCCAACATCTAAGGTTCCATCAAAGATAAGATGCATTGCTT CCATTATGGTAGGATGTGATTCATCCCAAAACTTTTTCACGGTCTTCTGC GTGAGCTTGATTTCTTTGGGATCCATTATCACACTGTCTTCAATGACTTC AGATTGATTATGAGAAGATTTATTAGAACTTCCTTTGGACTTCTTTGGTG CTGTTTTTCTCTGGGAGATCGGTTGAGCTGCCAAAGCAACTTCCCCAGTA GTATCTAATCGAATGCCTTTTCTATTagattcatttttttcacattcTAA TATATTCAATGGTATTTTTCTATCTCGAGTTTCCCACGCCTCTTCCCAAT GATCTATTCTTTCACGACAACAAGTCCACACAGCTAACGGCGGTGCATAT TTCTTGATGTAAGTGTGACTGGTTCTCTGTAAAATCAAATCTCCTATATG GGGCTTTTTTGTTACTttaatcatagtataagaaagccgcggctggaata tgtacagcattgtcttttcagttaattgctgttccatctctgtctccgag c
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002650TCONS_00002650Clytia hemisphaericatranscript
TCONS_00002651TCONS_00002651Clytia hemisphaericatranscript
TCONS_00002652TCONS_00002652Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:1009995..1017495 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22 0.19 0.19 0.48 22.52 25.27 519.26 594.55 219.49 257.07 555.45 315.34 618.58 581.03 466.67 1421.52 813.23 735.6 2.42 2.29 499.2 585.75 491.68 420.86 458.37 472 86 27.11 1.77 1.86