XLOC_001476 (gene) - C. hemisphaerica

Overview
NameXLOC_001476
Unique NameXLOC_001476
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:1064730..1071852-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001476 ID=XLOC_001476|Name=XLOC_001476|organism=Clytia hemisphaerica|type=gene|length=7123bp|location=Sequence derived from alignment at sc0000021:1064730..1071852- (Clytia hemisphaerica)
ATTTGTTAACGTTGTTTTAGAGATTGTCGCGTGCATCATTCAAAAACTTC ATGTAAAAATGCATTTTGTTGATTTCTTGGAAGACTTTCGTTTGGTTGCA ATCTTCACTGTAATATGCGCTGCGATTATCTGGCATAACTTGAAATTACT TGCAAACGTGTTAGGTAACTCACACTATGGGAAAACAAAATACGTTTTAG TTACTGGCTGTGATTCAGGATTTGGTTTTGCAATTGCTTTGGATTTAGTG GAATCGAAGTGTAAAGTTTTCGCTGGATGTTTAACTCAAGAGGGTGTTGA CAGATTGGAAAAGAATAAAGATTTCGATGGGTTCGCTTTTTTGATGGATG TCACGAAAAATGAAGATGTCGAAAATGCGAGGAAATTCATTGAAGAAAAA ACCGAAAATGATGGTAAAATGTTTATTATTTTACAACCATTAAGGACAAC CTAATATCACTAAGCTAAGAAACCTTCAATTTATAAGTTAAATGGCCTAC TCTTAGGTGCCAAATAAACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGGTCACA CTTTCTTAGAGAAAGCGCAACTTTCGAAATTTGGTTTTTATTTTAGTAAG TGAGGACAGCGCTAAATTCGAATTTCCCACTGTAAAAAATGTGAGTTCAA TATTGGACTCACAGCTCGAACCCGTCTCAAATTATAAAAAAACACACGAC GGATCTCCTGTCTAGGGGGGTTGGAAATTGTACTTCTGAAAACCCAAAAA TAAGGTAAATATAGGTCAAAATCAGGCTATTTAGAGCAAAATAAGGGGCC TTCTCTTTGACAGCTGAAAATATTTTAAAAAAATAATTAACGGCATTCAA GTAAACAAGCATTTGTTTTATTTCTAGGACTGTACGCAGTTGTCAATAAT GCTGGAATTGTTAAGCTTGGAAGAATCAGTTGGCAAAGTATGGAAGATTT AGAAAAAGTTATGGATGTCAATTTTTGGGGGACGGTTCGCACAACAAAAG CAATGCTTCCTTTGTTGACTAAAGCTAAAGGGAGAATCGTCAATATGTCA AGCTGTTGTGGTATGTATAGTATGAGGCGAAATGTGACTCAGACGAAATG TTTCGAAATTCAAATACACTCAGGTCCACTGTAAAATACCTACAGGCCCA CAGTAAAATATCAATAGACCTTATCGGACTTTTTGATTTTTCTAAAAAAG CGATGCATTGTGGGATTGTATCGAGTGTATTAGAATAGAAATCTCTTAGG AATTCCTCGAGGGAATTCTATTGTAATACACTCGAAACAATCCCACAATG CATCGCTTTTTTATAAAAATCAAAAACTCCGATAAGGTCTATTGATATTT TATAAGAAAATACCTCCAAAATTGAAATATTAATGGTCTATTGGTCATGG TTTTATAATTGTTTTTCTTTAAAAAGGGGCTGGATCTAGTGGTACGGATT TGCTAGGAACTCAAACAAAGCCTGTCAAATTACACCGGGCCACTTATCAG CGCCACCCAGTCTATCAAAAAAAGCTATAAATGGCCCCCGGGCTATGACA GACTTCGATAGACTTGAGGTTGATAGACTGTTGATGCATACACTTTTTTC TTTGTACTGCAAGTAACCAGGTTTAGCATTGAAATTAGCCAATTCTTTTT ACCGGTACTATCTCTAAAAGTAAAAGCTTTATACAAAATCTGACTATGAC AAACGGTAGCCCCTGACCCAATAAGCATAAATATGATTATAATATAAGGG ATGCCTCAGAAATTGAGCTAGAATGCTAAGTAGCCTAAGCCCTTAGTCGA AAATTGGCGTTGCTTATGAACAAAATTTCTGTATTTTATCATAGGGTTTG TACCGAACGCTTTAAACGGATCTTACACAATCTCCAAACATGCCATCGAA GCTTTCTCATACTGCTTAATGGAAGAGGTCGTCCATGATGGAATCTCTGT GCACATAATTTGTCCAACTGGTCAAAAAACTAACATCGTCGTTCCTGAGA TACAACGCAAACAATGGGAGGATGATTTCAATAAACAAAATGATGATATC AAACAAAGATATGGCCCAAATTTGACCAAATGTAAGTTTTGTTTTTATTT TATCTCTGAAAAGCAGGTATGAAAATTGTAAAGTAACATTGTGAAATATT TTGATCGATGTATATTTGCATGCCAAGAAGTGTAAGGCTTCAGTGTCATA AACCAGTGATTCGCGGCTCAAATCCCCACGGTTTTCATGTTCAGTTCTTA AATAGCCAAGCAAGCTGGCTGTGGAATACGTCAAAACAATTGTCTGAAAC AACTGTCTAAAAGTCCTAGATCACTCTGGGCCATCCAAGTGAAATATCGA CCCTATCTTACCAATATCTTTAAATGAATGGAATCTTTATTTATTTTTTA TAGTTTTGAACGACGCATTTGCTCGGCAAGCTAAAGTACCCGAAGGAACT GCTCAAGTCGTATCGAAAGTCAATCACGCTATCATGTCATCTAACCCTCA CATCAAATACGTCGTTGGACCTTTATCGTGGACCTACCAAATTCTAGCAT GTTTACCTGTCTCTTATTTTCAATCGGCTGCACATTCTATTTTCCCTCAG CTTAAACCCGTGATCGATCGGTTTGGACAAAGATAAATTCTACTACTAAA TTCTATATTGAAGTATTCACAATACACGGCTGAGAAGCTTTCAACCTCAC TGAACTTCAATCTCAAATGCCATATTATTTAAATCTTTTTTTGTGGATTT AGGGTACAGATTTATAAAACCCGAAAAGATAGATATCGTGCTTTAAGCCA TTGCAGGCAAAAAAATATTGGAAAAATATTGTTGCTATTTTGTTTTTGCT TTTCGAAAACCCGTGAAGCTTCTGATTGGTCAAGTGCTGAAATTCTATTG TAATGTCACGTGACCTAGGTAGGATTTCATACCTAACCACGGCACATCTT CGGGCTTTAGAAATCTGTGGTTTAGGGTACATCCGTCCGTGTGAATTTTT AGATACATATAGACATTTTAGTAATGAAATTTTAATTTCCAATTAAGACG GCGAAAGAAAAAGAAAAGTTAAAAGAGTGTACGATATTAAATTAAATTTA ATTTTTAATTTCTTTAAAGACCAAAGGTCGATCGGTAAAGAAATGCTTGT GTATTCATGATATGCACTGTTGCAATGTCTTCCACCGACCGAACAGCTGA TTGGTTGAAAGTGATGTTTGACTGATTAAACGTAACTTACNCCGTTGCAA TGTCTTCCACCGACCGAACAGCTGATTGGTTGAAAGTGATGTTTGACTGA TTAAACGTCACTTATAACCAATCAGATGTTGGGTCCGTGATGTAATGTCA GAAGACATATTGGAATGGTGCATATCATGAACTTCCAGAAAATGATCATT CTGTTGCGTGGACAACACCCCACAGCCTTTAGGGTAACCACCTAACAAAT TGAAATTACCTTTTGAGTCTTGGATTTTGACTTTGTAAAGGGGCAATAGG AAAAGTTTTTCCGGGAATGTGAAAGTTTACCCATTATACGGTACATGGTA AAATCCTTATGCTTATTTCATCAAAATCAATTTATTGGGAAATATTTCAA ATATTTGCCTTTTTCTCTGAACAAATTTTTAAAAAATTTGTGAAATTTCA CTAAAAACTTAGCTCGGGGTGAATCATAAGCATGATTCATAAGCATATAA TAAGCATAAGCTACGCCTGGATGCTTTGAGAACTTAAGCATACACGAGCT TGACCAAGGGGCAGACACTTGCTTATAAAAAAAACCAAAAACAAATATAA TGAGATTAATTTTTTCAAAATTGATTACGTCCAGAAAACGGTTATTATTA GCCACAGTTAAATAAAAATGGTATTTCTCTTTCACTCTAAGTGAACGTGT ATGGATAAATTATTGTAACAAAAATGCATTTTGTTGATTTCTTGGAAGAC TTTCGTTTAGTTGCAATTTTCACTGTAATATGCGCTGCGATTATCTGGCA TAACTTGAAATTACTTGCAAACGTGTTAGGTAACTCACACTATGGGAAAA CAAAATATGTTTTAGTTACTGGCTGTGATTCAGGATTTGGTCTTGCAATT GCTTTGGATTTAGTGGAATCGAAGTGTAAAGTTTTCGCTGGATGTTTAAC TCAAGAGGGTGTTGACAGATTGGAAAAGAATAAAGATTTCGATGGGTTCG CTTTTTTGATGGATGTCACGAAAAATGAAGATGTCGAAAATGCGAGGAAA TTCATTGAAGAAAAAACCGAAAATGATGGTAAAATGTTTATTATTTTACA ACCATTAAGGACAACCTAATATCACTAAGCTAAGAAACCTTCAATTTATA AGTTAAATGGCCTACTCTTAGGTGCCAAATAAACGGNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNAACGGCATTCAAGTAAACAAGCATTTGTTTTATTTCTAG GACTGTACGCAGTTGTCAATAATGCTGGAATTGTTAAGCTTGGAAGAATC AGTTGGCAAAGTATGGAAGATTTAGAAAAAGTTATGGATGTCAATTTTTG GGGGACGGTTCGCACAACAAAAGCAATGCTTCCTTTGTTGACTAAAGCTA AAGGAAGAATCGTCAATATGTCAAGCTCCGCTGGTATGGACTATTGTTTA ACTTCAAATGAACGTCTGGTGATTTTTCTAAGCACTTTCAGATGGGGCCG TCTTTGTAAACTTAGATCGAGCTTCTAATATGCCTGAAAGGGAATTGTCT CAGCAAAGCTGTATATTGATGAAGCTGGCATGGGGGTTTGGTTTGTGTTC AGAAGGCGAAGCTCCCAAAAATATTTGGAATATTATAGAAATTTTTGTTT GTAAACAACAAACAGGTTTAATGTTGATTAGAGGGTAATTATACCACATT AATATTCAGAAATGTTAGCGTAATCTACTATTTGTGGGGTCTTCATTCCA CATCTTTTTTACTGAGAGGGATCCCTTTGTTCCTTCCTTAAGAGATTTTA GCTTTATTGACAAACGGAGCCCCTCCCTTCTCCCCGATGGGCAAAGAATT TTTGCACCGTTTTCAGATTTTATCAAAACGATGCTCTCCANTCTGTTGAC AATCGGAGCCTCTCCCTTCTCCCCGCGGCTCAAAGAATATCTGCACCGTT TCCAGATTTTGCCAAAGCGATGCTCTCTCTTTTGTTCTAGGTACCTTGCC ATTTTCATATGCAGGATGCTACACAATCTCCAAACATGCCATCGAAGCCT TCTCTTACTGCTTAATGGAAGAGGTTGTCCATGATGGAATCTCTGTGCAC ATAATTCGTCCAACTGGTCAAAAAACTAATATCATTAACCCTGAGATACA ACGCAAACAATGGGAGGACGATTTCAATAAACAAAGCCAGGAAGTCAAAC AAAGATATGGTCCAAATTTGACCAAATGTAATTTGCTTTTTTTGTATTAT GCATCATTTGGGACGGCTTTTATTTTTACCAAAGTGTAAAAGGTTTTAAG CATTCGAAAAAAATCGCATTCCACTATTTTGAATCTTTGAAAGCATTTTC TTGAATTTTTCGAGTTTAAAATTAAATCCCTATCGACGTTCCGAACTTAC GAACACCGGACACGTCAACTCCTGTGTCGGATGCAGATACTTTTTAACAC CAGACAATCACAACTCGAGTCCGGTGCGTCTGGTGTGAATTATTTTTGAA ACATACGTGTCAGGTGTCAAGAAGTTCGAAAAATTAACACCGGACAAAAG GTTTCCGATGTGGCTGAGGGACTGTCCGGTGCGTCAACAGGGTCGTCCTG AATGATGCTCAGCAACTCCTCGTCCGTCTATTATTTCTTCATAGATTTGA ACAATTTGGTAAAGAAAATTAATCTAGTACCTGAAGGAACTGCTCAAGTC GTATCAAAAGTCAATCACGCTATCATGTCATCTAACCCTCACATAACATA CACAGTTGGACCTTATTCGTGGATTTACAAGATTCTAGCATGTCTGCCAG TTTCATATTATCAATCGTTTGCACATTCCATTTTCCCACAGCTCGAACCA ATAGTAGATCGATTTGGACGAAGATAAGTTAATTACATATTAAGGAATTT TCTCGTACATTATTAGCAGTTTTTAATGGTGTTATTCATATCGCTCCACG CATTTTTTTAAAACATCTGGTTAAATCACATCAAGAAAGTTGAAATTTCA AATTTGAAATGTGTTGACTCAACAAAAACCATTGATTTTAAAACCTATAC TACTATGTAGTAGGTTGTTTTAGTAGAAGAAAGCGGGCGGGTATTCGGTT TATTTTGGAGGCAAAAGGCTTAAGGGCTCTGACCATAGTGAATTTTTCAT AATTGCCGTGTTTAAAATGTGTTTTCTGACTGATGTAACCAACAAAACTA TGGCATGTTATACATTTTCTGTTAGACAAACTATTCCTGAATCTGAAAAT TCAAAAATTGCATTGACAAAATTTGATGAAGAAGAAAATGAAGACTTTTG TGAGGAAGAGTATTTCAACTTTGAAGAGCTTAGTTTCGGCGAAGAAAAAA CATTTTGAAAAATTTTTTGCAGTAGATGGTGTATCTTTTACCGAACAATA AAAATTTTTGCGGAAAATTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002748TCONS_00002748Clytia hemisphaericatranscript
TCONS_00002747TCONS_00002747Clytia hemisphaericatranscript
TCONS_00002746TCONS_00002746Clytia hemisphaericatranscript
TCONS_00002745TCONS_00002745Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002747-proteinTCONS_00002747-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:1064730..1071852 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
BDH1D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor Homo Sapiens
HSD17B2estradiol 17-beta-dehydrogenase 2 Homo Sapiens
HSD11B2corticosteroid 11-beta-dehydrogenase isozyme 2 Homo Sapiens
HSD17B6PREDICTED: 17-beta-hydroxysteroid dehydrogenase type 6 isoform X1 Homo Sapiens
RDH511-cis retinol dehydrogenase precursor Homo Sapiens
RDH16PREDICTED: retinol dehydrogenase 16 isoform X1 Homo Sapiens
DHRS9dehydrogenase/reductase SDR family member 9 isoform 2 Homo Sapiens
SDR9C7short-chain dehydrogenase/reductase family 9C member 7 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.16 16.92 7.63 5.81 1.49 1.79 36.26 38.85 49.33 59.14 40.44 44.41 59.35 53 104.82 143.86 16.71 28.43 24.1 26.41 22.18 20.01 28.73 32.74 21.11 23.87 302.21 193.63 7.31 10.4