XLOC_001536 (gene) - C. hemisphaerica

Overview
NameXLOC_001536
Unique NameXLOC_001536
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000023:670663..674198+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001536 ID=XLOC_001536|Name=XLOC_001536|organism=Clytia hemisphaerica|type=gene|length=3536bp|location=Sequence derived from alignment at sc0000023:670663..674198+ (Clytia hemisphaerica)
CCCCTTTTCGTTAGATcttgtttcaaaaagtttgtaatGAGAAATCAACC
CTTAGTTGCCTTTTCATAAATGGAGCAGTATGGAGCTGGCCTAGTAACTC
AGATGAGAGATCGAAAAGAATTCTTTTTCTATGCATAATCATAAGATTAA
GATCTCACTATGTGAGCCAGCCCGGCAACTGGACCAGCCAGTAAGTTGGC
CATCAACCGGCTTCCGGTTTCCGGTTAGAAATTGTtcacattttttaatt
tctacTCAATAGGAACACCAGTAAAGCAGGAATCGCTATTGATGACTGCA
CTTTCCACCAATGTGTCAAACTTAGTAAATTTGAAAGTGAACGAAGTATA
AGTTTCATTCCTCCAGATGGCGAATATGAACTCATGAGGTTGGTTTACTA
ATAGGCCTTATCGGATTCTTtgagcgatgcattgtgggattgtttcgggg
gtattacaatagaattcccttgaggaatcaaaaactccgataagatctat
ttttTAATACCCTTTGTATTTATTCTACTGAGTCTGagtctttaaaatat
ttttaacgtgattttcgaatttttgtgaTTGTAAATCTGCCTAATGTCTA
AAAGTCGTGttagaagaatttttcagtgaCTAGCATTACAAACTTATTTT
GTATGATCTTGTCGGACTATTTAAAAGCATTTCATTTCTTCCATTTTccc
agttttctttttttttgtgagGTACTCACAATGTTTTCAGTTGTTCAAAA
CAAATAACTTGTCGTATATTTAGATATCGAACGACAAAAGACATCAGTCT
ACCATTCCGTGTTATTCCGCTGGTACGGGAAGTAGCAAGAACGAAAATGG
AAGTCAAAGTTGTCCTCAAATCGCATTACAAACCATCTATATTAGGTCAA
AAGATTGAGGTATGTAAAACTAATTCTTAGTCCAATAAAACTTGACCAAT
TCGAAGTTCGGTTGCTTGATATTGCTTTATTGGATAGAACTTGATTGTTA
AATAGAACAGATGTAATTTTTTGACTAAGTTTATTTTTGACCCATGTCAC
TGCAAATGATGATTAAAAAATTCTTTATGCTTTAGTTTCAAAAGATATAT
CTTGTTTTTGCCAACTCATTTAAACATTCACCTAATGACTTGCTATTTAG
ATTCGAATTCCGACACCACCATCGACAGCAGGTGTGCAAGTGATTTGCAT
GAAAGGAAAAGCCAAATACAAAGCCTCCGAAAATGCCATCGTTTGGAAGT
AAGTCCATCtaaattaaagttttttatgTTGGCCAATAAACGACTGATAC
GCTTCAAAAGAATTTATTCCCTCGTGTTGCTTGTAGATTAAATTAAAAAT
CTCCAACGGATTTTCGATTTGTGTCACAAGCCAAAATTGTGTAAAAGAAA
CTGTATTTAGTTGAGATGGTTCGAAGATCgataaattttgtttgatatgt
tttttttaagttttattgtAATTAATTGGTGGTTAAAATGTGCTATTGCA
TCAacatgacaattttatgtactGGTCAAGtgtaaaatagatttttacta
TTGATTAATTACAATGTATTTTAAATACTCTACTTTTAGAATTAAACGAA
TGGCTGGAATGAAAGAATCTCAAATTAGTGCAGAAATCGAATTACTACCG
ACACGAGACACCAAGAAATGGACTAGACCTCCAATTTCTTTGAACTTCGA
GGTAAATAGCAGAGAATTGGAATAGAGATGCTTTGCTTTAGACCCCGCCC
ACTTTCATCACAAGAGAACTTACCATCTCAAgcacatattttgaaaaaat
ctttcttttttccctGCCTTATGTGCTAATTTCAATACGTGTTAAAACGG
AAGTATAAACTCTCTATCTAGCCTAGGACCTCAGATTTTTCCGTATAGCT
TGAAAGGCTGAATCAGAAGCTCTACCCGGAGAGTTAAGATTTTCCTTTAC
AGCATCTCCTCATCAAGTCCCTTGGTCATTTTTTAATTCCGTTTGTTTGA
GAGCTCTATATGCACTCATTGAATGTACAATTATCTCTTTTTCTTGTAGG
TCCCTTTCTCATGTTCTGGCTTGAAGGTACGCTACTTGAAGGTGTTCGAA
TCGAAATTGAATTACAGTGATCATGATGTTATCAAGTGGGTCCGATACAT
CTCTAAGAGTGGTTTATACGAAACCAGATGCTAGCATAGTCATTAGAAAC
GACATTCGATTACGTCATCACATGTGACTTTTTTACGGTATAAACGAaca
aatttttgacgttctcaCTTGATTTATGGGGGaacaatttttttgctgtt
tataATCTGATGAAACAAGTATATATTTTACCGTCCTCTCTGACAGCCAT
CattctaaaattaattttgatttccaaTCAATATTATGGGAGCCTCTTTT
AAGTAGAAATTGAACATGGTTCATTTTTAAGCTTCTCTAGCAGATAACTA
TATGGCCATCATTTGATCGTTTAATTTAAATTGTCTATTAGGGTTTTGTA
TTTATTTCCTATTCCTCTTCGCCTTTGCCTCAAATTCCTTaaatttgtca
ttctttttttgtttacacgataaaatgttttttattcgTATAACCCGATG
AAATTTCCTTTCGTCTGTTTCGACACGAAGAAATACTTGTTAGGTTTCta
gtaaaatcaattttattctaTTTCTTAGTAAACTTGTACTACCTTATTCC
CAAAATCTTCTGTATGATTCTGAATCTTAtttgtgttgttgttttttttc
taattaaaTAATTTGTGTAGAATTATTATATGGTAATTTTTTAcgttact
ttctttttatttgtttgtttgtttgtaattATGCTTTCTATTTAgaactt
aaaataattttgaaggGCCTACTACTGTTGTACTCCTTACGTCAAAGATT
ACTTCAATCgattttcaacaaaacaaaaaatgactCTTTTTATTTCCAGC
TAAGCCTTCGCCTGAGCATTTTTTTGTTACGAAAAAATCATCGTCGCAAC
GGCGATAGATGTCCTGATAATTATTCGAATTATTCTATTATTTTTGGGCT
ATATGTATAAGTCGCCACATTTCGACATGGATAGATTTAAGAGCAATCAC
ATGGCTGCTCTAAAGGAAGGAGATATCACGTAACTTAGATTAGAACTCCT
TCTTAACGAGGATAAGTTTTAAAATTctgttcaaaaagttctttttattt
gctataatttatttcattttgacaatatttacaaaaattctaatcataat
attttgaatcTTTCAAATGTTGTAGCCACTACACTAAGATTTTAACATCG
TGAGAAATTctgtagaaaaaagaaaaaggaaaatattaaaGACGACGCTT
TCAGTTATGCGATAAGAGCTCTATACATCAGGGGTCCAATATTATCATTT
TTCATAATTACTTTTCTATTTATTGTCGGTTACATTTTCACACCAGAACA
GAGTATTCCTGCTTAGCAGAACAACGGGTGACAGAGAACAAGATTTTGCT
TCCCATCATATTCTATGGTATACAATCATATAAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002819TCONS_00002819Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002819-proteinTCONS_00002819-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:670663..674198 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
140.04	135.72	141.99	144.03	147.36	115.11	145	157.04	97.29	105.48	84.46	71.33	78.69	76.58	71.03	76.36	91.27	96.21	50.73	55.54	78.51	78.38	74.03	74.81	62.14	68.62	100.06	84.64	92.28	85.45