XLOC_001657 (gene) - C. hemisphaerica

Overview
NameXLOC_001657
Unique NameXLOC_001657
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000024:1008153..1014989-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001657 ID=XLOC_001657|Name=XLOC_001657|organism=Clytia hemisphaerica|type=gene|length=6837bp|location=Sequence derived from alignment at sc0000024:1008153..1014989- (Clytia hemisphaerica)
GAAAATATGAGCTTTTTAATGGTACAAATTTGTAGATTGAGTAGGTTATA GAATGCCACGTCCTGAAAGGAATTGTGTCATCCATTTCCATAACATTAAA ACAACACCATTGATAAAATTCTCTGATGTAGCCTTCAAACGTGTTGTTGA ATTTCAAAAGAGCTGGCTCAATCTCCAGTCACAGTGTCCTCAAAAGGATG TCGCACAAAATCAAGAGCTCATGGCATTACTTGTTGACTTTGATGAACAA CATGACAACATTGAGGACATGTTTTACCATCGGGAATGCTATCAAAGATT TACAGACAAGGGGAAATTGAACCGGGCTCTGGATAAAGATGTTGAAATTC AAGAAGATGAAGAAGCCGAATCTAGATTTCAACAATGGGTATGGCTATGA TGATGGACACTTTCTAAATTTTTATGTAATTTTTGCCTTTTTATGATATA TAGCAGGCCTTTTAATTCAGACTTGTTGCAAAATTCTATCATCAGTAACT TGCAATTCCTCAAAAAGACAAATTTTTCTTCTCAAATCAAATGTTAGAAT TTACTTCGTTGATAAGTAACAATTTACTTGTTTTCTTCCAAAGGAAATCC TCCAGAACGATGGCCCTTCTAAACGTTTACGCTCATCAATGTCATCTCCG CCACCTGTAGCTTCCAATTCTAAAGATATTCTTCCACCTGTTTGTGTCAT TTGTAACAAAGTTGTTATCTATAAAACAAATGTAAGTTCAAGGCTTTTGT TGTTCCACTGGCAATTCGTGTCGGCATTTGCGGCTGCGTCTGACTGTTAA TAAAATATTAATCTTATAATAGACTGCTCTATTTTGTAAATTAGTACCAG CAAGAATTTGTTCTCTGTTACCATTTTTATTTGTTTTTATTTTAATTCCT TTTATTTTTAGCATATTGATGGGAAAAGGACAGCTGTTAATATATCCAGT GTTGAGACATTGACAGACTCAATAAGAGAAGCTGCTAAGAAGAAAGATGA TAGGTATAACAATAACATCCCTAGTGTCTAGGTATATTAGGGCACTAAGA GTTGAAGTCTTGGAATGCATTTGAAGATATTATACAATCATGTCCCCAGG CACTAGTTTGCAGGATGATGATGTCTGCTGCCTAACTTTTGGCGGCTGGG TCCAAGTTAAAAGTTTGTCTTAATCTTAAGGATAAGAATTATCTTATCTC ATTGATCATATTGTATTGATCAATTCATCAAAATGTTTTCCCCCCTAGTG AGATGCTTAACAAAATTGGAACCAAGGAGATGGCTTGCTCTGAGGCAAAA TATCATATACCATGCTATAAACTTTACACAAGATGTTTGTTTCAACCTAC TAATGCGATGGATGTGGAAAATGAAACAGAATCAGAATTGACAGAAACTG AATTGACAGAGACTGAGCTCACTGAAGATGAATTTGAAGGTACCATTTCT TCTAATTTCGAATTTTGTGACTTACTGTTTTTTTTTGAATAGGAGATTGA TATTAATATTCTTTTCTAAAATTACTTCTCATGGTTTCACTTTGTTTTGA ATGAATTTTCTTTGGTGCCTTGCTTTTTAAATTTAAATAATTGTATAGAA ACTGCAATGTGTAGAATTTTTGTTTTGTTTTCATTTATGTAGGATATGAC CAGCCCGACTATCTCAAAGACCGAGAACTTTACATGGCAGCATTGTATCT GAGAGACATTGTCAAAAGTCACAAAACCAAATATACATGGCCACCAACAC AACAACATTTTGTTCGAGGAAAAATTAAAGACACCTTACCGCATAGACTC TTTAATTTCTTTACATGGGTGATCGGTGAGAGTAAAGAAGCTATGTTTGA TGAATTTGTTGACGTCAGCGATGAAAGTGAATCAGTGGTAATGTCAATGG CACAAGATTTGATTTATAATGCCAGCAAAGGTCAAGTTCAAACTGAAAAA CATTTGGCTCTAGGTATGTTTTTCTCTAAATGAATAATTCTATGATTGAT GTTCCTTTTACAAACAAAATATTCTCTCAAAACACAAAAGGAATAAAGCA TTTTTCCATAACCAACTAACTAGCATTATTGAGTAGTAGCCTATTTGCCT TTTTTTTTTTCTTCTTTAAGGCATGGCTGTTCGTCAGATAGATGGTGGAA ACCAATTGATTGATATCTTACATGGTCTTGGTCACTGTACGTCCCATTCA TCAGTTCTTCGACACGACACTGCTTTGGCTGAGAAAACGCTGAAGAAAGA TGAGGAACTCCCAGCAGATGTAGTTGAGGGAGAAATCCCAATTCTTGTTA TCGACAATGCAGATTTTGGAGAGGAGACCAAAGATCAAACTCACATAATG AACATGATTTTGCTTCAAAATCCAAGATTGGAAGCTCCTGAAATGACTGA CGCACCTATGAAAAGAACCTACAAAAAATCCATAGCAGCTCCAGACGTTC ACATTGATGAGTACAATATGACAAAGAAAAAGTCTCCAAGTTTTGCTTCC ATGTTGCAGGGCACCTCCACGACCTGCACAGCCAATTTTGACGATGCAAA AAGTAAAGATTTTCTTTACTTGGTTACCAAATCATTGTCCCCTTCGGGTA GTAATGAAGAACCACCGTTTGATTGGACAGGGCACAACACCAAGTTCTCC ACACCCCGTAAGCAAACAAAAATTCATTATCTTCCCATCATTGATGCCCT TCCTACAGAGTATTCAACTATTTTCACAACAATGAACAAAGCACTGAAAA TGAAGGATGAAGTCAAATACCCATACATTGTCATTGTCGCTGATGAATCG ATCTATGCAAAGGTACTACAAGTAAATTTTTATCTTGTGATTTCTGTGTA ACATTTTACTGGGATCCTTTCATAACTTATATTTTTTTGTCAACTGAAAA TCTTTTTCGATATAATATTTTGTATCATCTTTTCGTCCCTAACACTGCCT AATACCTTACACGAGGATAACATTTTATTGCATTTTAAAATTTCAGGTGC AACAAATCAAATGGAAAGAACCACAGTTCAATAGTATAATCGTGAGATTG GGATCATTCCATACAATAATGACTTTTTGTGGGACAATTGGAAAACGATT CGAGGATTCTGGTTTAAAGGTATTATTTCTTGATAATATTATTCTTTTCC AATAAATTAAAATGCATTATATGAAAAATTCTGATTATGATGCTGTGCGA TGTGGGAAAATTGTTACAATCAAAATTACAATTTTAAATTATTTCTGTGT TGTATCTTCTTCAGGAAGTTATCATTGCAGCAGATATTGGAGTGGGCCCA TCTTCTATAAAGAAAGTCCTGAATGGAAGATTTTACAATGGAGCAATTTA TATCAACAAGATCGTTTATGAGGCATTACAACGAATTCGATTCAAATCCT TTTTGGACTCGTTAAAAGAAGAAGAAAGGGAATCAATCATTTTTTTTTGT GAAAATTATCAATCTTCATGCAACAACTCTGAAGCACGTGAACACATCAT TAAAAGTTTCGCTTTCATCAATATAATGAAGAAATATGAAGAATTCGTGA GAGAACATCGAAAACAGAATGCAACGTTTGATTTTTGGAGCTCATACATT GATATGGTTGGTAAGAAACTTTATATGGTTTAAAACAGTCTGGTCTATGA TAATTAACAACATTGTTTTTAGATATCATTAGCCTACCTTTCTCAAAAGT ATATCATATATATTTCTTAATTTTATTCAGGACTGCTCTTGAACTTCATC AGAGGAACTCGTGAATCTGATTGGGACTTACACATGGAATCTGCTGGCCA GATGATTAGCTGGTTCTTTGCATACGACAGACCAAACTATTCTCGTTACA TGACAACCTATTGTATGGAGATGAAAGAATTACCCAAGACTCATCCTGGT GTGTACTTAAATTTTTCTGGTCTTAATATCTTTACTTTAGAGAGACTTTC ACCCTGATTAATCTTTCTTTAGTATAAACTGGAAACAATTTTTTATCCAT ATTTGCTGGTTATCACATGAACTACCTAGGGTTATCACACCACAAACTTA GAAATCAATAATGATGAATTTGGTACATTCTTTAGGTGCGCTAGAAGATC TCAGAGATAATTTCACTGTTCAACGTCAGAAAAGGCATGGTTTTTCAGCA GTACCATGTGATATGACGATCGAGCAAACTGCCAACCGAGATTCAAAGAC AAAAGGGGGATTGATAGGAAATACGTTGAACAGGGGTTACATGCACCGCT GGCTTCTATCACAACACCATCGAACAGCAATCACTAGAAGATGCCAAGAG ATGGCTGGAGTTTCTAGATATGATAGGTACTAGTATATTTCATTCTGTTC ATTTTTAAAGATAGTTCTTTTTGAAGCAGAAAATCTATGAGAGCCACTTA TTAGAATTATAGATCTTATCTCCTTCTATTGAACCACCATATTTTTACTT AGAGTTTGATTTATCGCGTTTCTATTTTTAGATCCAAAAGGAATTTAGAC AAGACTTTCCGAGTGAAGCACGAAAAGCATGTCAACTCAATTGTGGAAAC AGTCGAAGGTCTCGTTAACCCTTTTGAATATCAAGCTGATGAAAAGTCGA TTGTAAACATCTATAGTGGCCGCGTAGCCTGTCCAGAAACTTCAAAGGAC CTGCAAAGAGCTCATTCAGTTGGAGAAAATTCGTATCACCTGTTCCTTCA AAACCTGATGTCAAAAACCCCAGATTTATTCGAACCGATACAGAAGAACA ACCTGAAAACGTTTCTCGTCAAGGAGAAAAGAACGAGAGACTTGCTTGGT CGTCTCTTATTATTATCCAACACAAGAGAAGTAGATCTGACAAGTCTTCT TAACAATAGTTTATCATCACTGCCTTTATCACTTGGTAAGCTTTCACCCG TTTTTATTTCGCTTTTTTTGTGAAATGGTTTTGGATACGTCTTGCAGTAC TTTGCCTTTATTTTCAAAAACCAAAAAGATTCTTTTTGTCTAAATTGGAC AATCTCTCCACCAATTTCGTTGATTTTCCTTTACGGGCTTCTTGCTTTGT ACACTCCCTAACAAATTAGGCACAAAATGGCCTACTAACCTTTCCTAATT ATCTTTTATACTAGCAAACTCTACTGGAAAAATGAGAAAGACAGTCAAGT CCAAGGTTATGGACATGCTTGAAGATTCATCTGACAAATCTAACCCTGAA TCCATCACAAGCGAAGTCCTGCTCATTGACGCTATGGCAATAATCCAAGC ATTGAAAAATCCATCCAAAACGTTTGGAAAATTGGCAACACAAATTTTCA ACACTATCATGACCATTGCAACCAAATTCAAATCAACGAGAGTTGACTTC ATTGGAGATCGCTATCCGGATATTAGTATCAAGGGGGCTGAGAGAGAAAA GAGAGCTGTTGGTGATGGCCAAGTCTTTGCAATCGTTACAGAAAACCAGA AAGTTCCTTGCGACTGGAAGAAATTTCTTTCAGTTGGCAAAAACAAGGAA AACCTGTTGTCATTTCTGTCAAAACAATGGAGAAGTATGAAGCCTGATGA CTTCCCTGATGACATTAAGTTTTTCATCTCGGAATCGTCCACCTGTTTCT CAGTCATGAAAGTCGATGCCGAAATCTCAATCGAAAACATCGAAGCTCTT AGCTGTGACCATGAAGAAGCCGATACACGTCTTTTGTTACATGCGAAACA TGCCGCCGATGAGGGGCACACAAATGCCCTTATCAGAACACCGGATACTG ACGTTGTCGTCATGTTGGTTGGCCTGGAGAACCAAATTGCAAATCACTTG TTCGTCGAGACAGGAAATGGGAATCGGCGGCGGATTGTTGATATCAACGA AGTGGCATCATCGTTACCACCCGGTGCCTCCCAAGCTCTTATTGGTTTCC ACGCTTTGACAGGTAAGAAATTATTTTATTACTTAATTGGAATACTTGGA AGTGCTAGGTGAACAATCCAATTCATTCTTTTTTCATTATGTTCTAAGAT TATCGTAAAAATAATTTTGATAATGTATTATTGCCTCTACAGGATGCGAC ACCACAAGCTCATTCTTTGGGAAGGGTAAATCGAAGTGTTGGAATCTAAT GGTGAATAACGTTCAGTTCGTCGACGCGATATCAAAGATCGGAGATTCGT GGGATATCCCAGATAATGTCGCGCATGTAATTGAGCATTACGTGTGCAAG CTGTTCGGTTCAAGTGCAACAAACGTCGTCGATGCACGCGTGGAATTGTT CAAGCTCGGAAAATTCTCAGAAGAATTTCTGCCGCCTACACCAGGTGCAC TTCGTCATCATCTCCTTCGAGCAAACTACCAATCGATGATTTGGAAGAGT GCTCTAAAATCAACCATCAATGCCCCCTCCCCTGATGGCCATGGTTGGAG ATTGGACGGTGGTAAATTGAGCATCGACTGGAATGTCACATCGATTTCTG ATGTGACGTCTATCACTTCTTGCGGTTGTAAAAGTGGCTGCATAACAAAT ATCTGCAAATGTAAGAAAAACGGTTTGCAGTGCACCAACGCCTGCAAGTG CATAAGTTGTGAGAATGCACCAGAAGAGGCAGTCGATAAGGCAGAAGAAG AATCAGATGACGAAAGTTATGATGACGCGTTGAACGACGTAGACTGGGAT GATGAAAGTGACATCGACTTTACGTTGAATTTATAATAATGCTTTTACTT TGTACGAGTAATATGTTAGTTTATATTTTTCATTTCCTGCACGTTTTTTT TGGATAAATGACTGCATTATATTTTAAGAGACCTATTATACTACAGATTT CAAAATTAGCGTACTCATCGATTGTTTTAACTTTTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003026TCONS_00003026Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003026-proteinTCONS_00003026-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:1008153..1014989 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.28 0.21 0.19 0.06 0.16 0.14 0.18 0.22 0.17 0.14 0.22 0.19 0.26 0.33 0.45 0.28 0.23 0.61 0.66 0.83 0.8 1 0.09 1.15 0.42 0.37 0.18 0.22 0.03 0.08