XLOC_001739 (gene) - C. hemisphaerica

Overview
NameXLOC_001739
Unique NameXLOC_001739
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:987407..990916+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001739 ID=XLOC_001739|Name=XLOC_001739|organism=Clytia hemisphaerica|type=gene|length=3510bp|location=Sequence derived from alignment at sc0000025:987407..990916+ (Clytia hemisphaerica)
GAGCAAATCAATAAACAAATCAATTACGTCAATATTTTTATCAAAATATT
TGACGTCAAATTATTCTTAAAGAACAACAGTGTTTGAAAAAAAAATTGTC
ATTTCTATATTGTAAGTAGTCTAGGCAAGCCAGACATTTTTGGTAGAAGA
AATTTTATATTATGACTTTGGATAACGACATTATGGGTTCAATGGATGTT
TCAATAAAGATGGTGTCAAAGCATGATTTGGATTTTAATGAACGACATCA
AAATTCAGTTCCAAAATACGAAGAAGCTATTATAAAGAAAGGTCAAATAG
AAGCCGTTATCGAGGAAGCTTTTGAACCGAGAAATACTGGTGACAAAGAA
TCAACTAAAGATCCAATAGATACTGTTCAGTACGCTTTGAACGTGGCCAG
CAAGGTGAATCAACAAATTCTAGAACTTGGAACTGTGAAAGAAAAACGTG
AAAAACTAGTCCAAAAATTTGAAGAGGCGCTTCAGAAGAAAAAAGAGGAG
AATATTTTTGTGAAGCCGGTTGATAAGTTGAAAATAACCGCTGGGAAACC
GATGGATTTTGACGATGCTTTGGAAACGGAGATGAGGCAGAAGACGAAAG
ATTTTAACAACAAATTGGACAAAATAGAGGGCCAATGGACCAGAAAAATC
GAGATGCTTGAAAATAAAGCAAAAGAAGCACTAGACAAGAAGTTTTATGT
CGAACAAAATCTAAATACTGTGCTTTTAAAAATGAACTTGATGGAATTTG
AATCATCAAAAAATCAAGAAATTATCACAGCTTTAAGAGTAGAAAATGCA
AAATTAAAGACTGAAAATGATGATTTGAAACTCAAATTGGTTGTCAAATC
TCAAGAAAAAGAAGCACAAGATGTTACGAAAGCTAAGCATGAAACGGCTG
AAGTAATTGAAAGCAGTGGCTCTGGTAGCGACCAGATTGAGACTAGATTA
CCAAATCAATCATTATTGGACACCGCCAAAGCTGAACAAAAAACAGTTCC
GAATACTAATGTTCGATTTTCAATTCCAGATGAGTCGCCTTGCAAACGAT
TGGAAACAAGAGTTGGACGCCCAATGAAAAAAGTGGACCAAAAAGATAGA
GAAGCAAATGCATGGAAGAGGGATTCTTCAAATAAAACTGCCTCTAAGCC
AAAAGCAGACAAAAAGGTACAAGAATGAAAAATTTCATCGAATTGTTTTA
TTTAATCTTTCAATAATTCTATACTCCCTTGAAGACCAGGAAAAAATAGC
ATTAGAAAGGTTATGCATGGATAAGTTTAAGTAATATTACTTTCTCTTTG
ATCTTTTAACATGACAACACGCGAGGTGAAACTCGAGGTGGTCCAAAAAA
AACAAAAAAAAACGCCAATTTTGGTGCAATTTGGCAGAATTTATTTTGGC
GATTTAATAAAATTTCTAAATTTAGCGAGAATTAATTTTGGCGAACGACA
CTTTTTTGTTCAATATTTTAGCTGAAAACGAGGGGGAAAAAGGGTTTTTA
GGAGAAATAGAGAGTAAATTGAAAGAAAATTAAATTTGGCGAGAATTTAT
TTTGGCGAATGAAATATGAATTTCTTTCCGCCAAAATTTCTTCCCTTATG
GTATTAGCCAAAAGCTTTTTGGGTTTTGGGATTCTGCAGGAATGTGGATC
TCTACTAGGAGCCCTTTTCAGCTTGTACATTATTCAATCTCATAAAAAAA
GTTTTCCTCCAATCTTAGGGAAGAAAGCAGACCAACGCCAAATTGCAAAT
TGATAAATACAAAAAGATAAGCAACAAGACTGTCGACCAATCGAAATACG
GACAAAACAAGCCAAAACAAGAAGGAACAAAAGTGATTTCGCAAAAAGAA
GTTAGAACAGCATCAGCAACTTTAAACAAAAAGTGTGATCTAAAATGCAA
AAACACTACGTTCAAGGTAAGCCTTTTGGAGCGGTTTCTACTGTATTTCT
ATTTGGTTGCAGGATGCTCTTGAGGCCCATTTTCGCAACTATAAATGCTT
TTAGCGAGCACCCCGTCAGCACCTTGGACTGACTGCCTAATttccctcac
atggtatgggttcacccgggcgaaggttcattcacttgacTAGTGAACTG
CTGCGattgggaatcgaacctcagttcGTGCAGCAACCAAGATCAATGGC
CACTATACCAAAGTGCCTAACAGCAGTAAACCACCGGAAATGTCAATTAC
CTCTAATGAATCAACCCCACTTTCAAACCAATGAAAAAGGCTTCAAGACA
TCTGAGTCCGAATCAGTAACGTCtcaaaatttaaaggttttgtttttttt
ataagagtgatatcgtttgcttgtactcatcaattttaattcacaagctt
tttcatattgaattgacacgaatgtgttaacatttgtttgcttatataag
cataatataacaataggcagacactgtcctgatatgaaatatgtgcctga
tatgaaGCGGGAactattatataaaaataaagcctttaacccttttttat
tgatttcaaGGAGTCGGCAGTTTTACAAAGAGACGTCAGATTCAGTGAAC
CAAAGAAATCTCAAGATTTTCGCAACGGATCTATGACACTTACCAGCATC
TTCATAAAAGACGGAATAAAACAAATTAAGACACAGGTCCCAACTGTTAA
GAAGTAAGTAAAATTTCACATAGGTTTACACTTTCACAATTATTGCAATT
TTAGACTCTTTTCACCAAATTTTCTGCAAAGTAGGAAAATAAAAACCTCT
TTTTATAAATTTTGTTCCATAAAATGAATTGTTTTTTTGTAGAATTTGCC
AGTCTAAAAAATTAAACTCTTCTACTATCTTTATATTTGTGATAATTCAA
AATAATCAACTATCTATCTCCATCGAAAAACCCTCAAAAAAGCTTTGTTC
CCGTTCGAGTTCAAATTAGTGAGATTCGACGGTGAATAATTCTTTTTTTT
TGCGTTTTCAGACCACAAGTTCAATGTGATGCAAAACCAGCCAATAAAAC
CATCCAAGAACAATCTAAACAAGCCAAGAAACTAGCTGTCTTCAAATACA
ACAAAAATCCGAAGAAGCCGATAAAAAAATTCGCCAACGGACACCATTTT
GAATCCAAGGAATGCTGGGATTAATTCTTAATTCAGTTTTTTAATTTTTA
ATCTTTTTTTCTCTTCTATTTCTATTTCTTTCTTTTATAATAATCATTTT
TTAAATAAATTCCAAAAACATAATCTTTATTTCAAATGTTTAATGATTGA
TCTAAATTAGCGGGACCTGGGTGAATCCTTTTCAACTGATGGTGAAAAGG
AAGGATAGTATCTTACTCCTCATACAAAATTACACAAATATTTATTGATC
GATTGTCGTTTGACGCTATGGAATTCTCAAAAATCATTTACACGAGAATG
GTGTAAAGCTAACTTATCAAACCTTTACATGAACGTACATACTTGCACTC
ATTTGCGAATCTCCTGGCTTGTGATTATCACATTTTGCCCTTAGTAAGTT
TTTATCTATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003138TCONS_00003138Clytia hemisphaericatranscript
TCONS_00003139TCONS_00003139Clytia hemisphaericatranscript
TCONS_00003140TCONS_00003140Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003138-proteinTCONS_00003138-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:987407..990916 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.25	0.37	2.14	2.48	0	0.18	0.06	0.29	0.02	0.08	0.34	0.34	0.21	0.41	0.35	0.36	0.07	0.29	0.02	0.06	0.33	0.49	0.09	0.36	0.02	0.24	0.1	0.25	0.21	0.23