XLOC_001740 (gene) - C. hemisphaerica

Overview
NameXLOC_001740
Unique NameXLOC_001740
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:52120..54649-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001740 ID=XLOC_001740|Name=XLOC_001740|organism=Clytia hemisphaerica|type=gene|length=2530bp|location=Sequence derived from alignment at sc0000025:52120..54649- (Clytia hemisphaerica)
AGCGCGAAAAGTTTTGATTGATTACCATATCAATATTATACACAAAGAAT
AATACTATTTACAAAGCCTTATTTATCATTCAAAATTTCTATTACACTGT
TTTTTCGGAAAACCAAGACTAGCCTGTATTAGCCAAACTCTTCGTTGTTG
AAAAGATAACTCAAAATACAGTTTGTTAAGGTTAGATTTCTTTCCGTATG
TGAAGTATTTTTGCAAATTTCTAAATACCTGCAAGAATATTCATACAAAA
AATGATTACTTCAAGTTAACCCAAATTTTAGAGTTCACCGTGTTCAAAAA
ATAATTTAGTTTTTTTTCCACGGGATATTAGATATTCCTGCGTGGGAGTA
GGTCTCCTTCTCAGAAGTTGCAAATTACTGAAACATCTTGGTAACTGGCA
ACAAGTGTAGTATAATTTTGAAAAAGAAACCAAAAAATTATTTAAAATAA
AAAAAATAAAACTTTCTACACCTCTGTTTCTCATTATAAATGTTATTTAC
AACAATATTAAATTTGGAATATCACCTCTTTTTTTCTTCGAAAAGGGAAA
TATTAAGGGTTTTAGGGCAAGATTCCCCGCGAGAAAAACTTCAAAATACC
ATCTTTGATATTTTCATCTGCAAAAAACTTTCGTTTAGTACGATTAGAAT
CTTTATAAATTTGAAATATTGAACAAGAAATTTTTTTTATATCCCTATCT
ACTTCAACGAAACATTTTAGATGAGAAACTCGAAAAACAAATTATGATAT
GGTAATATACCAAAAAAGCCAAATTGCGATAAAAATGTCTCAACACTTTC
CAAGTGAGTCCATATTTATTCAACCAAGGATTCAATTTCAAAAAATTATT
AGGATTGAAATTCTTTTACAGCCTTTCTGTTAGATTGAAAAAAAGCTTTT
TAAGTTTGTTTCCAAAGCCGAAAAAGAAAGTAGAAGGCCTGTCAGGGACA
GTTTTTTTTTCGACCAGAAGTTTGATTTTGATTCTAATAATTTTCTCCAA
TCCACCATCCATCACTCACATTATCCTTTCTACACTCCCAGAAATCGTTT
ATAAATTCTCTAGCTGACAAACAAACCAAATACATTCATTTATGTCCATT
GAAAGAATAAAACATACCAGCCGGTAATATTTCCTATTCTAAGCCGTACA
ATTCTATCTAGATAAAACGACCAACCATCATGATATTTGATTCTTCATCG
GAGAGATGCTTTTAAACAGCGACGCCCATCTTACTTTCTGACGGGCGGTT
TATATCTCATCAAGGGTGGACGGGCGGGCATTTTTTATCGATAAGGTCGG
AATTCAAGACATTTGCTGTAAACAAATATAATCATCATCTTCTTGATTAT
CCATTAGATGGGCGGTGTCCGTCGTCTCTATTGTATCTACTAGTTCATCT
AACGCCCCTTGCCGACTGCTCGACGCCCCTTGCCCATTACTGTCTCTTTC
TGCATGAAAACTCTGATCATACGTAGGGGGCGGGCAGTCTGTTTTATAAG
GATCATCATGCTGATAACCGGGTAGTGATTCTATTAATACGGCATGTCTT
AAATCGTCCGGTGATAGTCCACTAAAAACGTACGCCGGTTGAGGCACGGC
AGGAACTTCTTCGTAACATGTTTCGACTGCTGAGCTCTATAAAAGAAAGG
GAAAAATAAAAAAAAACTAAGACCAATATGAAAATTTGGAAAATATTTCC
TTGAAAATTAATAAACAGCGGAGGTAATAAGCGTGTCCTGGGAGAAATAT
TTTCAAAAAATAGTTGCCATGTTTTGATCTAAGGCCCGTAGAGAAAAATT
ATTAACAACTTCCTCCTTTTGAGAATTATTGGTAAACTTACGCTAGAACT
GTCACGTTGTCGTTGCAATCGCCTCCTTCTTATACAGACGTAGATGGTCC
AGAACAAGACCTTCACTATCAAAACGACAATGATGATGCTAGAGGTGGAA
AAGAAATATAATATAAATATATATAAATCAGTAAAATTTCCTCAGTTTGG
ACAGATCTTATAGAAAGAAAAATCATGAAATTTCTTTCACTTTCTTCTCC
CTATCAACTTCACATAAATTTCTTTTAACCATATTGAAAAATTGATAAAA
ATTGTCAAATTAATGAACAATGTAATAGGTTCTAATAAAGAAAGTCGCGG
AAAAAACTTGAGCAGGTAGAATTTGGCAATAGCTTGGTGGTTGAAATTTA
GCAATTACTTACATATAAAATAGAATTTGCATTTTTGCTTCACACTAATC
CTCCTAAAATATTAAAATGTAAATAACACGTTAACAGCGAGAGAAAAATA
TCATTTTAAGGCCAGCAAATTATTTTACAAAAAACTAGATATACCAAGAG
TAAAAGAAAAACAAAGCGATATAAATAGTAAGAGTAGCGTGGGCTTTGTG
TAGAGTACAAAATGGTTTCTATTTCTGGATACAGAGAAGATTTTCAAAAT
ATTTTCCCTAACTGATATTTCGAATGATGGAATTAACCACTCTCTCCCTA
TGAAAACAAAGATAAATTCGGACATCTGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003141TCONS_00003141Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:52120..54649 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08	0	0	0.17	0.36	0.28	0.22	0	0.27	0.13	0	0.13	0.35	0	0.07	0.12	0.05	0.15	0	0.14	0.22	0.54	0	0.15	0	0	0.3	0.66	0.63	1.21