XLOC_001764 (gene) - C. hemisphaerica

Overview
NameXLOC_001764
Unique NameXLOC_001764
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:601986..611105-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001764 ID=XLOC_001764|Name=XLOC_001764|organism=Clytia hemisphaerica|type=gene|length=9120bp|location=Sequence derived from alignment at sc0000025:601986..611105- (Clytia hemisphaerica)
CGGCTTGTTTCACGAGCGTGATGGAAGGCGGTCGTTTCAGTGTGGTTTAC ATCCACACTGTGACCTAGTTCATATGATATTTTGGTGCTGTGGGTACAAA ACTTCGTGGAAGATTACACAACTTTTCTCTTAACAAAATAGCGTACCTCA AAAGCACAGACAGCTTTTTTAAAAGATTTTACCATCAGATGATTGGCTTG AAGTCTACCATCTTGTACTTTCGAGGAATGTTTTCCTATTAGGAAATTAG AACTGAAAATAGGACAGAAGATAAGACCAACTGCTGAAGGAAAGTGTCCA ACCTGTCCAAAATCCCAACGAAGATGCTTTCCACACGAAGTTTATCACAG GGATTCGCCAAATATATTTCACCAAAGGTTGTTGCAGTATCATGTCAAAG AACGGTTCTCCCACCCGTCTTAGAAGAGGCTACAGGAGATCCATTACCAA CTTCACCATACAAATTTTCACAAAATAGTCGTGCTCCAAAAACTCAAACA GTTTTGGTCAACTCACTACTTGGTGAGTCAAATTTCATTTAATTTTTCCA TATATAATCCCTCATTTTAGTATCTTAACATAAGTGTCATTCTATAAAAA GGAAGGAGACTGCCTGTCAGTGAAGTACCGGGTCAACTGCTCTAACTTTT GGGACGATTGGCGGTCGAATGGGCTCTTCCAGTTAAAGTCTGTTACATGG GGGTGGACGACGGCAGAATTCCAAGGCAAAATGTTTTTTTGGAAACCTTT GGGAGCTTGTTCACGCGTGTCTAATTTGGAAATGCGTGTGTCAATGTTCG ATCATCGGAGATATAAGGGGAGCCGTCCATATTCATTTGACAACGCAAAA CGTCAAATTGACGTTATGATAGCGACTCCAGAAGTCATGCAACTTTCGTT GACGTCAAACCAAATGTTTCATTTTTCCGTGAACTTTGAACCCCTCAAAC TTTTTTTCTATGCATGCTAAAGCGTCCGGATTTTACTAAATGAAAGCCTG TGATCTGAGCTTTCCAGCGGTATGTAACACTGTGGACACGGGCTACAGTA GACAGCAAATTGGTAAAATGCCGAACGTTTTGCAACATTTTGAAAATTGT TTGCCGACGGGAGAAAAACATTTTGCAACTGTCGATGAACGAATGTGTCT GGAAATTGGAGGAAATTGTATTTGAAGGCTGAAACTTTGTATGTTTATCA GAAAAAGGGTGAGGAATTCAAAAATCACATTCGCTAAATTTAGTTCTTTC ATTTTCATGTAGTTTTTTTCACTTTTTTTCTTCTTTTGCATGGGAATGTC CCAAAAAAAAGTTTTTATTTCTGCCGAAATATGGATTTTCTTTTCATTTG GCTATTTGGGGTTTCTCCTTTCAGAAAAACTTATTCTTTACTCATAAGTT TTTGTTCCTCCATTTCCAGAGGCCCTTTGAAAATGGGTCCTACCACCTTT TTTGACTCATTTCAACCTTTTCCAAGCTACTTTTCTTCAAAAACAAAAAT AAAACAATGCAATGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTACAAATATTTTTATATAATAATATTCTAACACCATCA AAGAATTCTCCCTCCAAATTTCAGGTCTCTAGCTACACTAGAAAAAGAGA TATGCAAAATTGAAGAAGTATGAATGGAAAATTTCTTTTTTTTCTTTTTT GACACATTTTTCGAATATTTTTTCCAAGCTATTTTCCTAACCTTTTTTTG ACATTTTTAGTCAAATTTTTGACACTAAAATTTGAATATCTTTACAACCA CTTATCCTCTGGAGGCCTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NGAGGCCTATGACCCCTCATTTTCTTTCTTTTTCAAAGCTCTACAAGATA GGATAGATTTTGAAAAAAAAATTAAAATTTGAAAAATCTTCTGGAGTTGC TAGTTATGAGGGGGTGGGGGTTAGGTTTGACCTTATAAGAAATCAAAGGT ATACCTTTTTGTGAAAATCCCGGATATTTGTAACCACCAACCACACTATA CTTTTTAAGCTTTCAAAAACATATTCGTGTATGAAGTACGTGAAAATTTG CTGCTCGCATAATCCCATTGGTTCGCGCTATGATATCATTACATCATATT TTCATTGTTTGCGCGATCGAGCGAACCACATCGCACAAGTGGGCAAAGAA GGTGGTACGCCTAAAGCACGGCATGGACCTAGCGCCAAGTGGAGCTTTTG ATTTCTTTTTAAATAAAGGTCATTAGCTAAAAGAACACATACACGCACGG GTACAACAAGTCAGGTTTTTGCGGCGGAACGAGAAAACTTTGATGAAAAA TGGCTACAACTTTTGGTATACATCAGTACATCGCTTGACGTTATCTGTGG GGGGTGGGGGGTTCAGAGGATAACGTCAATTTGACGTTTTGCGTTGTCAA ATGAATATGGACGGGTCCCCTAAGTTTTACCAATGTCTAAACTGTTGACT ATATCTAAAGAATACACCTCATTGGAAATTCCACCTCCTCGCGTTGTTGC TACGCAACATTTTTTGGGAGGTAAACAAAGCGCGATATTGCGGTTTGCAG ACAAAAAGCCTTACAAAACACCCGAAATATTGATGCCAAAAGAGCCTCCA TGACTGAAGAACCACCGAAGTTGTTGTTTTTCTCTTTCTTATAGCTTCTG CTAGCATCTTGAAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATA TACTAAAAAGGGGGGTTTTTTTAAAAAAAACCCCCCCTTGAAAATAATTT GAAAAAAAAAAAAAACTTTTAAAATTTTAAAAGTTTTTTTTTTTTTTTTT TTTTTTTTTTTCAAATTCACTGAAATGAGGTGTATTTTTAGGAACATATA AACAAGCCAGACATAAGCAAATGAGTTCTTGTTTTACGCGGGAACTACTC GCGCTACCATTTATGTTTACCTCCCAATTTTTTTTGTGGAATTTCCAATG AGGTGTATTTGTAAACCTTTTTAAGATCTGTAAAAAGCTCCCTACAGTAC TCCCAAATACCGTGAGTGGTCCTAAATCCGACAGCGCTGCCTAATTCCGA CCCTCCAAATCAGTGTAGACCTAACTCTTCACACACAAATTACGGGAAAC GCATGTTTGGACTTTGTACCCTATGCTGCACTCAAGCACTTAAGCCAAAG TCCTGCAAAGGCGGAACAAAGATCAGTTTTTTGAAGTTTGCAAAAAAACG CCACATAGAAAATCTTTCAAATTCAGTATGTGAATAGAGCAGTAAAAAAT ACAACTTTTCTATTTTTCATTTTCTTTGCAAAAGTTCTAGGAATGAAAAT AAAGGGATAATGACAATTGAATACTATCCATTGATGACCCGCGGCACTAT CGTAAAGCTAGAATCGCTTCGCGTACTCTTCGCTTGAGAAAATGATTGAC AGATTGAAGTTTTTCACCCGCGCAGGAGTTCGCTCAATCCTCGGAGGATG GTTTTGGAGTGAAATTTTTAAACACGGAATTTTGAGTGGGGCTGAAATTC AAGGGCATTTTACCACCATGGACAAAATTTTTGCTTAATTTGTGACACAG GGGTGTTTAAATCTTATTAATTTTGCCTAAAATGCTCGGTCAATAGTTTC ATTTCCTAAAATTTGGTGATTTTTAGTACTCATGTACTAAAATTTTTCTT AAATTTCTGGAAGACCCCACCTAATTTGGGATTTTAGTACACATGGTACT AAAATGCTTTATAGTACGGTCTAGTTGTGCAAATATTGTGCACAAAGGCG TAAAAGCACGAAACTTTGCACAATGGTAGTTTAGGGGTCAAAAATTGATT TAAATCTCAGACCCAAAAAATTGACACCTGTTTGTGTATTTTACAGACCA GAATAGGTTTCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGCAAAAT TTGTCAACCTAACAATACTAAAAAAAACTATTGTAAAATAAGCTTGCAGC TGATCTAACCAATAGTATTTAGTACCTGAGAGGTACTCTATTGAATCTAC AAAAATAAACACGTTTGGGTGGTCCTGGAATTTTTGCTGACATCAGTAAT TACGTCATTTTCGGTCATTTTTTAAACAACCTTCCCCAATAACTTTTATT GGCTTCATTTTAAGATATGGGTTGTAATGTTTTTCTGAACGGGCATGAAA CATGCTTTCCAACGGTATGTAACATGACATACTTTGGAGAAAAAGATTTT CATTTTAGCCTGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATT TAAATCCATTTTTGACCCCTAAACTACCATTGTGCAAAGTTTCATGCTTT TACGCCCTTGTGCACAATGTTTATGACTTTTGGCACATTTAGACTGCACT ATTAAGGCTTTTTTTGTAATACCACCACGTCACTAAAAGTCATGATGTCT GAAATTTTAGTATCGACCCCCCCCTGTATCATCTATTGCTCAAATTTTCA TTAAAAAGCGCCGGGTTATTTTTTTCATGAATCCCTGTAGAAGTTTTGCG GTGCATTTTTTTGCTTGAGAGTCAGGTAAACGATAGAGCGCTTTTGCAGC ATTAATCTTTGATACGCATTTTGGCGGGACGCTAGTGTGACTAACTGTGA GTTAATGAACCGCGTATTAAAAGATACACGATTTCTCTTTCGCACCCAGT AGGCTTTTAAATCGAAATATGAGAAAAATCCGTAGTGGAGCGCACGCGAA TGTCTGGAACAAAGAAGAACAAATTAGTGCCAAAACGAAATGAAAGATCG AAAGTTGTTTCGAGTTGTGACGTCACACAGCGTCACATTCTATTGCTTTT GTAAACAAAAAAATCTAAATTGATTTCAAACAAATTTACAATTGAAAGTC CGATTTCAAAAAATTTGGACTGACAGGATGGTTATTTACAATGATATGAA CAAAATATAATCTAAAAGTTGGCAAAACCTAAGGATAACTCACAACTCGT ACATTTGATTAGTTATCAATTCACAATTGAATCTGATAACTTGATTGGGT ATAAGTTGCATCTGACGCCTATTTTGGAAATCGAAATCCGTGCTGAGGTG CAATATTTCAAGCAAGACTCCATATTTTTTATATTATTTGGTGACTTAGA AACTGTCATTTTTGGCAAAAATTGTTTTTTTCTTACTAAAAAGAGAGTTA TGAAGACGCTATTATGAATTAAGCGAATGACGAAAAACTGACGTTTTATT TTGCTCAAGTACCTCATTGGAGACTTCCATCTCTAAAGGCTTCAGACATC ATATTACCTTATCGGCCCTTTTTACGCCAAAGGCCCAAAATTAACGCCAA TAAGGGTCGGCGTAAAAAAGGCCGATAAGGTAGTTTGAAAGCTACGGACT TGANTAATAAGGGCCGGCGTAAAAGGGCCGATAAGGTAGTTTGAAAGCTA CGGACTTGATGTATTTTAATCGGCCTTTTGCTACCCAAAATTGGCTTGTT TAGGGCTCGAATCAGGGGGGGTACCAAGTCGTGGTACTGGACCAGTGCCG AAAAGTTGTACTTTCTTGTTTTTTGAAATTTATCTGAGACCACCATCACT TAGTACCCTGGTACTAAGTTGAATTTACCACTTAAAGTAGGTATACCACC CCTTAATACCCGGTACAGTCTTGATATCACCATTGAGAAACGACACACCA CCGTTAAGTACCCTGTACTAAGTTGATTTTCCCCCTCAAAATAGGTATAC CGGGTGGTTTAGTTCTTAGTAATTTACTTTTTGGTCTTTGATTTCTGGTA CTTTGTGGTACATCTCCTTTAAATTTTCTAAAAAACTTTACAACATTAAA AAACATACCACACCACTCTGTACCCACCCTTAATATCTCAGGAAAAATTC CTGTCAAGTTAGGTAAAGTCAAATATCATTTTCAAGTCAATTTTTTTAAA TCCAAAGAAATCAGTTTCAAATAAAAACATTTGTATAACGAGCTTGTCAA AGAAATCAAAAGAACTACAATAAACTAGTCTCGAAAAAAATGAGAAATAA GAATAGCTAAAAATAGTTTTGAAACTGCTCATTCAAAGGCAAAAATGTAA CAACCATCTCAAGAAAATCCTAAGAACTTATAAAGTATACTATTGAATTA AAATCACTTCTGGCTCTGCTGGAAGTTTCAAATTTGATTGAAAAGCTTTC TTTTCAACNAGTACCGACCCCCTGGGGGGTACGGGGCCCCCTGCTCGAAT GGGCAGGAATGGGTATAGTTTTATTATTTTTGAAATTTAGTACAACAAAT GAAAAATAAGATTTGCTAATACTTTGAAATATGCACAAGCCAAATACCGT TTTTCTAATTTTCTAAAAGAAACAGCACATTTTTAATTTTCTGACTTCAC CCTAAAAATGGCTGTTGACCCCATTGAAGTATAAGCCCGAAGGGCTAGAA TCGAATCTCTAACCTTTCTCAGGCAAGAACAAGTGAAGCCTTAAAACATG CGTCGTATTTTGACGACGGATTCGATCTAGCAATTCTTTTGTTTTCATGT GATATTTTTGAAATTTAGCAGTAAATTTTAGTTCCAATCTGCCATTTGTG TAAAAACTAGGCGGACCGTGTTAGGCCGTGCAACTTTGGTAGGATTTGTT GGCTTCAAATCCTACCAAGGAGATTCGATTCTAGCCCTTCGGGCTTATAC TTCATTGGTTGACCCTACCCTATTCCTGAAAAATCTNTTAGGCGGACCGT GTTAGGCCGTTCAACTTTGGTAGGATTTGTTGGCTTCATTGGTTGACCCT ACCCTATTCCTGAAAAATCTTTGAAAAAACAAACATTTTCATTTATCTAT ATTCCAGTTTTGAACAATTTTGTCTTCATGTTTTTTTAGGAAAACAACAA CAGCGATTCAGTCACACCGACGTAAACGTACCCAGTTTCGATGAGTACCG ACGTGATTCATGCAAAGATGCTGAAACACGTAGCTCAGAAACCGATCTCT CTCGACGTGCTTTCACATACTTGATGTGTGCCGGTCTTGGTGTTGCAGCT ACACACGCTGGCAAAAATGCTGCCTTAGATTTCTTATCAACCATGAGCGC TTCTGCTGATGTTTTGGCTATTGCCAAAGTTGAAGTGGACCTTTCCGTTA TCCCACCAGGTAAGAATGCCACCATTAAGTGGAGAGGAAAACCACTCTTT GTTCGTCATCGTACTCAAGACGAAATTGACCAAGTCCGTGCTGTTGCAAC TGACAGTTTACGTGACCCAGAAGCTGATGAAGACCGCGTCACCCATCCCA ATTATCTTGTTCTTTTGGGTGTATGCACACATTTAGGGTGTGTCCCAATT GCTAATGCTGGTGACTTTGGAGGATATTACTGCCCTTGCCACGGATCCCA TTATGACGCTTCAGGACGCATCCGAAAAGGTCCAGCACCACTTAACCTTG AAGTACCACCCTATCAATTTTCAACTGAAACAACTTTGATTGTGGGTTAA TAAAGATTGGTGAGAATTTTTGTGGAAAGCAACAGAAAAATGTTAATAAA ACAGTATTTTTAAATTTGTAAACTAAAGATTCTGTCTGGAAAAAATAAAT GTGAAGTTAATTATTGTAAACATAAGTGTGAATATGTCTGTGTCTGAGAC TATATTACTACTAAAGATATTTTAAAGTTTGCTTTTTTGTTGATTTTACA CATGAAACATGGATGAGTCGAAAATCGAAAAAACTGATGTTTCACTTTTT TAGTGTGTTCTTATTTTGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003198TCONS_00003198Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003198-proteinTCONS_00003198-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:601986..611105 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UQCRFS1cytochrome b-c1 complex subunit Rieske, mitochondrial Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
333.03 335.7 413.23 409.51 319.44 266.48 302.17 321.69 418.57 401.7 525.58 535.66 444.68 461.63 443.6 436.75 581.04 630.28 325.97 287.92 727.46 746.18 354.01 404.6 528.39 506.71 575.32 664.27 402.49 383.02