XLOC_001822 (gene) - C. hemisphaerica

Overview
NameXLOC_001822
Unique NameXLOC_001822
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000026:444953..448921+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001822 ID=XLOC_001822|Name=XLOC_001822|organism=Clytia hemisphaerica|type=gene|length=3969bp|location=Sequence derived from alignment at sc0000026:444953..448921+ (Clytia hemisphaerica)
GTGAAAGTAAAAGAAGGATAACCATCCATGTCTGTTGCAAGTGAATATTA
AAGATTGAacgataaaaaaaagaaataaaaatgggAGCAGATGATCCGTT
AGAACCCTTTGTTGATATTATTCGAACACAAGATACGCAGAAGCGGATCA
AGTTAGCAGCACAGATCAAACCAGTTTTAACATCTTTACACAATTATAAA
GGTATTGCAGGAAACTACATTATTGATGGTTTGGTGGCTTGGATCAGTTC
TGGAAACTTCaaggtatatttatttttctctttaaagCCTTATTAAGAGT
CAAAAGCAACTAAGTATGATTTTGAATTATGATACaaatatagcttttct
ttaAATCTACTTGTGTGAAAGGGACGCATACCCATTCGCATTGCAATCGA
AATTCTATCAGATTTGACTTTCTTATCATTATCATCTGTCATTTCATAGG
TTTCACAAATGGGTTTGGAGCTTGTTGGTATTTTAGCATACAACATGAAC
GTTAATTTTAAACCACAAGTACCCTCAGGTAAtatatttgaacatttttt
gtaGATTCgattttctttaactttgaaTGTAGGTTTTGCGTTCGAAGAac
aatgaaaaactttttcttgtGTGATTTTGCAACAAATTGCAAGTGTACTG
CGATTGAATGGCCAAGCTCTTCAATTTTTTACTgcttttctttcattgaa
attactTTTGAATTTCAGTCATACCTCCAGTAGTCGATCGTCTTGGTGAT
GCCAAAAAGATTGTAAGTTTTTTATTGGATGTCAACCTTTATAATTTCTC
AGATCTTCCTCATCCTAATAAACTAATAAAGCTTTAGACCACGTTCATCA
CACGCTACAGTTCTATtttcattctattggttaaattcaatttttacgtc
acttctaaccaatagaatggtttcatttcgtttcggagcaaaAAAGAATT
GTTATGTGCGAGCATGGTCTTAAAATATAcacattttagtttaattttaa
atttggcatATAATTATGATGATCATGATTGACTTGTTTTTTTGTAGGTT
CGTGAGCAAGCCCTTGAATTATTGAGTATTTTGATGGACCCTGTCTCAAG
CCCTCAGGTATCAACTTTATTTTCGTTAATACATTAAAGTAGGGTGTAAA
CTGGAaccatgaaaaaatactttttttggattttcaaaattgtcacaatt
ttttatcaaaatttatcatattgttAGACTTCTTGCGNNNNNNNNNNNNN
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NNCCTttaatagtcttaaaatggacaaaaaatgccatttttgccgttttt
tgctACTACCGCGAATCAGATACCCCTGGGGCAAACAGTGGATTTTTGAC
TTATTGACCTCAGAATTGCGCAAAAAGTCTTAcaatataataaattttga
taaataattgtgacaattttgaaactctaaaattcaaaattcagttTACA
CCCTACAAAGGTCGTTCATTCTTTGACCTTCCATGGTTTTCAATGTAATT
AAATAGTCTGCAATTATGTGCAACTAGTTCccaattactttttaaaagac
tttttttAGGCAGACTACCATCTAACTACGATCTTTAGTGTATTCACATT
ATTAAtcttttcatattttgtttCAGTTTGTGTTTGACAATTTGAATCAA
TATTACAACCACAAAAATTGGAGAGTACGAGAAGTGCTCATGATCTGTTT
AGCATCCACCATTCAAAGGTACACAGAACCAGATGAAATTAATCGAATCA
TANAGTGCTCATGATCTGTTTAGCATCCACCATTCAAAGGTACACAGAAC
CAGATGAAATTAATCGACTCATAATAAATACTGATGATTTAGCAGTCAAG
CTTTAAAGGGGAATGGTAATATCTGAAAATCCAAGGAGAAGGGTCAGAAA
TATTCCTCAAAAAGGAACCCTGTTTAGTTTAAGAATGTATACTTATCCAT
TTTTTTGTACtttcaaaaggaaaatttgCCTGCTATGTAACCCATTCCTA
TTTTTGAGGCAGTTTAGCGCAGTATGTTTAATTACATTATTCTATAATCT
TTACATTCCACTCGCCTTAACTTTGCCACCATTGCATTAGTAATGAAATA
CTGAATTCTGCAACGCAATATTTCATGTCACTCACTCCAGTAACTCGAAT
CTCCTTTCTTTAGATTCAGTGCAACAAGTCTACAGATCAGCAAAATCACA
CCTGAGCTAGTGAAATTATTACAGGATCCAACGGGTCAGGTTCGAGATAC
AGCCTTTACAACGGTCATCGAGATTTACAAACATGTGGGTGATCGATTTC
GTCACGATCTTGCAAGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003271TCONS_00003271Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003271-proteinTCONS_00003271-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:444953..448921 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.66	6.21	3.73	3.48	52.48	40.3	33.39	34.87	17.38	23.82	14.9	15.54	13.52	12.28	12.96	14.44	17.57	18.91	11.74	20.34	12.52	10.87	13.42	16.39	18.61	14.93	7.22	5.99	12.67	13.07