XLOC_001842 (gene) - C. hemisphaerica

Overview
NameXLOC_001842
Unique NameXLOC_001842
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000026:257107..264581-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001842 ID=XLOC_001842|Name=XLOC_001842|organism=Clytia hemisphaerica|type=gene|length=7475bp|location=Sequence derived from alignment at sc0000026:257107..264581- (Clytia hemisphaerica)
GTTAGCAGACGATATCATCCACCAGGATGCAAGTTGCGGGAATGGTGTTT CGTGACGTCATAGCCCCCTTTAGTCGGCGCCGTAAGTCTAGAAAACATAT TTTTTGGCGGGTANTGTTTCGTGACGTCATAGCCCCCTTTAGTCGGCGCC GTAAGTCTAGAAAATATATTTTTTGGCGGGTAAATAATTGCGCGGGAAGA AATAAAAATAAAACTTGGCCAGGGGCAAGCAACATGGATGAAAGTGAAAG TGAAGGACTACTTGGTAAAGATGATGATTATTACTTTGGAGATGATTATT CTTTTTCCGAATCAGAAGAAAGTGTGTCCTCTAGTAGTGATGATGAGGAA AAACGTGATCCAAACGATGCAGTCGAGGGTACTGATGATGTTAGGCAAGA GGAAATCAAAGTCAAAAAAGACCAAGAAGAAGCCGAATATAATGGTCGTG ATTCTCTTGAAGACAGTGCATATAATGCAGGTATTTCATCTTCAATTATG TAGATACTCCCTCCTTTGATTGTTTGTTATGTTTGCTTGGGGGGCTTGAT ATTAAACAATGCCTATTTTTTGACTATTTTTGTGGAATTAGGTAGATGTT TTAATCGTGATAAATTAAAATGTTTTAAAATCCGAAAAATCACAAGATAT ACTGTTTTTGAATCTTTCAAAAATGAGAATGATTTTTTAAGGGGGGGTTA AAATATTACTAGGGAGTCGAACCTGGGCCGCCCAATTGTCAGACAGTCGA CCTAACCATTATACCGACTACCATTAGTATTTAATGATATTTTATTAATA AACTTATTCCAAATTTAGTGAACAACAAGATACATTATTTGTGCAAAGAT GTCCAAGAAGCATTGACGCGATTGAGAGAATATGAATTACGCACAATCAC ACGCTTTTCATCATTCAAGTCAACTAAAAACTTCGGCAATACAGGTAGCT TTATAAGTATTGAAATAATAGTTTGAATTTGATTGACAGATTTTCTTTAT GATTGACAGGTCCCTGATTTTTTATGGATACGAACTCAAATAAAAACCAA ATAAAAATGTCCTTTAAAATTAAAAACATTTCTTTTTGAAGGGAAAAATT GTTATTGGAAAAATAATTTTGAGTTGATTGAAGCCTCAAGAAGTTTCTAA ACATTTGAGCGAGATTCGCTCATTTTTCTTATAATTTTTTTTTTATGAAA AAAGTGTGTATTTTCAGCATTTTATCTACAACTTTTTTTAAGTAGTAAAA TTTCATTAAAAAAATTCTTTTGTCATGTAATAGATCTCTTTGCTAAGAAT CACAAAGTGTACTGGGAGGCTGAAGGGATTTCAAACAATGGAAAACCATT CGTAATCTTGTCGTCTAAGAGCATGGATTGCCACCACGGACCAGATAGAA ACGTCAAACACAAACAAACATACAAAGAAAAAAAGAAAGAGCGTTTGTCA ACAGTGAGAATTTTAATTGCCCTTAACGTTCAATAATTTATGTATAACAC AACAAGGTTGTGTTCCCTGGGTACATGTTTTTTATAAAAACAGACAATAT AAGAACATATAAGGGTTCGATGGTCAAAATGTTAAGAACAAGTTAAGAAC GTTTTAAGGCTTTGAGGACTCTAGAACACCGAATTTCATAGGAAAATTGA CAAAAATACTCAAAAAATGGCTAAAAGGAGAACATGTTAAGAAAATCCCA AGGCTTCAAAAATTTTGGATGTTCTTATAAAAAAACGTGTATGTGCTGCT GGTTCATTTTTTTAAGTTTAATTTCCNTCTTATAAAAAAACGTGTAGGTG CTGCTGGTTCATTTTTTTTAAGTTTAATTTCTTTTTACAGAATTCAGATC ATTACAAAGGGAAAAGTTATCTAATTGTACAAGATACAAAGAAGTTCGAT TGCCCAGCAAAGGTTACAATGCAAGAAATTGTTCAATTTCCAGAGTACAA CAAGGTAAAAAATTTGGTTTAATTACTCTGTTAAATCTGGATGATACCCT TGCCTCTACAGAAGCGAAATTTTTAAATTAGAAAACTCAGTTTTCAGTGT CTTTTTGTCAAATCGTCCGAGTAGTTTAGTAGTTATTCAAAGGAGCGCTC TTAACTTGTTTTAAAAATTAAACTATTCTTAGGCAAAATCACCACCATCG ATTAAATTAGAAACATTCAAACGAAATTCTTCCAAGACTCTTAAGGAGAA GCTGGCAGATAAGAGTCTTGCGAATTACGAACGAAGGATTTTATTGTCTA TTGATGACGTTGGTTGTCATAAGTATCATCCGATGGGAAAGGTATATATT TAATCAACTTGAGACTTAGACTTCTGAAATCTCTAAAAGAACATTGAAAA AGAAATGAACTACCCTGTTGTAATTCAATTTTCGTTATAGACACAAAACA TATCTCAAAGTATGGACCCAGAAATTTCATCCAAAATCGACATGTTCGTA AAAGAGGGTATAACAAGTGTGCGGGAAATGAAAAGGCTGATCAAACTAGT TGTGGCTGATATGTTTGGGAAAGAAAACTTGCCACCATCAAACAGCAGAC GTTTTTATCCTTCCATCCCTATCATACGTTCAAAAATGGATAAATCAAAA CAAAAGTTAAGGTGAATGAATAAGATATCTTAAGTACGAGATAATAGTTT ACAAAAACTAATTCTAATTATTCAAAATATACTTGTATTAATGAATTAGA AAATAAGCCTGCATCTGGTATGGTTTGGTATATTTCTGAGAGTTATTTCC GTAACATTTTTTCAATATTCTTAAAAAAAGGTTTAGCATTCCAATATTTG TATTAACCTCTAACCATTCAAACTTTTCATTGAAATTTATCATTGAAAAT ATAAACACATTCTATCCACTTGCATTTTTCTCGCTTTTAAGATATTCCAT GATCGATCAAGAGTGCTTACAACAGAAGATTGACGAGTGGAAGAAGGCTA ATCCGTCTTTAAACACGTTTTATCGACCAAAGGAGGACACAGGTGATGGT AAATGCCAGTCATTTTTGTTTGTGCACCAGGAAAAGTGGCAAAGAGATCT GCTGCAACGATATGGGGATGAAATTCTCCTTCTTGATGCTACACATAAAA CGACAAGATATGCAATACCGTTATTCTTTCTGGTTGTTCCAACGAATCTT GATTATCAAATTGTTGCAACATTTGTGACTGAAAATGAATCCTTCGAATC CATTTTAGAAGCTTTAAAGGTAGTTAAATCATGGAATCCGTCCTTGAAAC CGCTGTTCGCAATGACTGATTATTGCAAGGAGGAGATCAATTCTTTAGAA TGTGTGTTTCCAGGTAAATTTCTTTCTCTTTTTTAAAAAGATCTGTAAAT AAAATAGAAAAGTAATAAATAAAATTTCGTTAGATTGTGAAAAACTCGTA CTATCATTCTTTATCTCATTCACCTACTCCTTCTGCACTTAAAAAACGTG TCTTTAAATTCATTCTTGTATTTTTAGGTTGCGAGGTGCTGATTTGTGAC TTTCATCGCGAACAGGCTTGGGGACGATGGCTTAAGGCAACAAAAAATGG ATGCAGCGGGAGAAAGGACGACATCCTACCCCGATTGCGAAGAATTGCTA GATCGAAAACAATAGAGGAAATGAATGAAGCCTTAATATCATTGAGAAGT AGTGAATTTTGGGAAGAAGACAAATATAACAATTTGCGTGAATATATTGA AAATTACTGGCTTCAAATTAAAGAAGTAAGTTTATTTCAAATTCTCGACT GATCAGGATGAGGATTGAGAGATCTCTGTATTTTCAGAGGAAAATGAGCA GGATAAGTTAGTTGGAAAATATTTTCCTTAGAAAATGATGGGTATAAGGT AGATATTTTTTGTATTTTCCAAGGAAAATTATTGGTTTAAGTACCTAGAT ATATACTGATATATATTGTATTTCCTGATGGGTATAGGACACATAGGTAG ATTTACTTTGTATTTTCAAAGGAAAATTATTGGGATAAGGTAGTATATTG TATTTTGAGAGGAAAATGACGAGGATAAGGTATATATACTTTTTCTAATT TACAATCACAACTTGTTTTGTTATAGAGATGGGTTTGGGCCTATAGAAAA GATCGTTTCATGGTCAACATCAATACCAACAATGGAGTAGAGAGACAGAA TGAATCTTTCAAATACTCGTATCTGCAAAGATTTAAAAATTCCTCTCTCA CTGGGATGCTGACAAAGTTGATTGAGAATTTTTTACCTGATAAATATACC AAGTAAGTAATTTATTTTTCAATTAGGTTTCAACTTTTCTTCACTAGATT CTAAATATAGAGAATCAAAAAATTTTGAAAATGAACTTTTTAACTGTTGT TTCTAACATTTTATGACATATAACGTTGTGTTTCTCCCTAAAGGAATGTA ATTCTGATTTAGATACACTGAAGAAAACTACAAAATGGATTCCCGCTACC GAAAGTATAATTCTTCAATTCCACTCTACCTATTAAACAGACCACATCAT TTTGTTAAACATTGTATGGAGAAGATAGCACTGGCAAAATATGTTGACTT GAGTGGTATTGTGATCAAAGGTCAAGGAGAGTTTGTTGTACATAGTTTTG AAAATATTCACAACCACTACATTGTGAAATTTGGCGATGAAGAAACTATG CCAAGTTGCACGTGTCCAAGCTGGAAACACTCGAGATACCTGTGCAAACA CTTCTTTGCCATATTTAGGAAATACCCTGAAGTCTGGTCTTGGAATGCCC TTTCAAACCTCTACAAGAAGTCTCCATTCTTGACTTTGGATAATTCTGGA GAAGAAGAACCAAGTATCTCAGATTACCTTAAAGATACACCAATTGAAGA AGATGAAAAGCCATTTGAAGAGAAGGATAATGAAATGGATACTGATAATA CAGGTGACCTGCATGGGGATGAAAACAAGGTTGAATATCAAGCTACAGGC TTGAAATATGGCACCATGGCCCGTGACTTGCTTACTCAGTTGAGGAACAT TTCATACGAGTTTGATGATGCAAGTGAAAATAACAAAGAGCTTTTTGAAG CCCTGTCTCCAATCCTACAAGCGGCAGAGCTGAAACGAAAAAGGGAGAGT AACCTTCCTCTCCTCCCTCCATTAAAGAAGAAAAGCACGCAAGGTACAAA ATACCTTTCTTTGAGCCTACACAAGAAGAAAAATTCAAACAAACGTGTTG GCGAAAAAGCAGATCAAGAAAAGAAATCAAAATTGATCAAGATTGAGGAA AATGAAGTAAAAAGAGAAAAGAAAACAATTCAGCTTATTGAAGAAGAGGT GCCAATGGAAAATGTTGTGACTTATGGAAATGGAGACCAATTTGAAGCCA AAGAAATCATTTTTGTTGAATCTGACGAGGAAGTAGATGACGGTAATGAC AAAAATTATCAAGTGCTTTACCCACGATGGAACCTCAGAATTCAAGACAT GGAGCTAATATCCAATGGTCGAATGCTTAATGATAAAGTTATAATGGCAT TACAATCCATTCTCCATAAAACATATCCTAACACCTATGGTCTCCAAGAC ACAGTCCTTGGTCAAACCTTTGCATTTCTTCATGTAAAAGAACCTTTCCT ACAAGTATGCATTTTATTATTACAAAATCAACACAAAGTCTTCACTAATA TTTTCTTTTTACATTTCTGTATGACAATGTTGAAATGTCCTCTAATGGTA CAGTTTTCTTAATATCAATTTTGCTTTCCCTCCCATTCTAACAGGAAACT TATTAAAATATTTTACTCAAGTGGTAATAAATATTGAAGTCATGGCTTCA GGCCAATATAATCTCAAATTATGTTTTTATCTTTTCTAAAGCAATACAAT TTATTCTCTTATTTCTCTAGGTTTTGCATACTGGAGGTGCCCACTGGCTA GCTATCAGCACAATTGGGTGCGAAAAAGATGAGGTCAATCTCCTTGACAG CTCCTTTAATCGGAGTATGACCTTGCATACCAAACGCCAGATCTGTTGCC TTTTGAAAACCCCTGCATCCAAGTTGACGATCAGATCTGTTCCTGTGCAA CAGCAGACAGGGGGGGTTGATTGTGGCCTCTTTGCCATTTCGTTCATCCA ACACTTGGCACAAACAAAGATGAATCCAACTGAGGTATGGTTTGACCAAG GGAAAATGAGGAATCACGCCCTTAAATGTTTGAGGGATAACATTCTTCAC CCTTTTCCAACAAAGGAACCCGGAAAAAGGAGAAGGCGAGCAGCAGTACG AGAATTTAAATTAGACATCTTTTGTGTATGTAGAACAATTTGGTCACCTT CTGATGCAAGAACAAAAGGAAAGTGAGTAAAAGATTAGTTTTTTCCCTAT AAGAAGTGACCTTTTTTCTAAAGACAATATCACGTGGAATAACTTTTTTT GATACACCTTTAGGGGAAACTGAATGGTACAAATTACCACTACCATTTTA ATTGATGTTTACTTCAGTGTGTATTCTGTCGTGTAGCCATGGAGAAATGG AAAGAAAAAAACACTTGGAGTAAAAGTCAAACAAAAGTGGAATATTTCTA TACATTTATTTGCATAAGCCTAAAAAATAACATCATAGTTGTGTAAGTCT ACTGTGTTTTAATTTTACTAATTTCATATTTTATAGAGAAATGGTTGAAT GTGATGAATGTGGTAAATGGTTTCACAGGATGTGCCTTAACATTCCTGAG TTTGAAGGTGACACTATAGAATGGGAATGTCCNTCACAGGATGTGCCTTA ACATTCCTGAGTTTGAAGGTGACACTGTAGAATGGGAATGTCCTGAATGC ATAAAAAACAATCGTTGAAGCTATTGATATTTTTTATTTTGTGATACGTG TTGTAGCTAATAACTTTATCATTTTGTGATTAGGCGCCAATCAAAAATAT GTTCCATTCAGGTCCTAAAACATCTTCAAATCCAGTCGGTTGATCGATCG GTAGTAAATTTTGTCGGATTTTTAAGATCTAGTAAATTCCCCGATGAATC AAGCCTTAGTAGCTAATAATTTTATAATTTTTAGTCATTACGTTTTATCT TTTAAGTTATGTTTTTACATCTAATCTAACAAATAATGACCGTTAAGTCT GGTAACTTGCATCAGTAGAGGGAAACATGCATAGCCATCAAATGACTGAC CAATCATACCAGCAAAATTTCAAACCAAAAGAACTACACAGCTTCACTCG CAGCTCTTTTCTTACCATTTTTGTTTTGATTTAACTTTCTATTTTAATGA CCACCCAGGTTATTAATTTGAGGGCTATGCATATTGTTAACCATGCATAT TTTAGCCTCCACTGATGCAAGTTACCCAATCTCACGGTATCATTTTTAGT CATTACGTTTTATCTTTTTTAAGTTATGTTTTTCTCTTGTCAAACATACA TCTACCATAGATATAAATAAGATATAAATATTGCATTTAGATATTTTTAT AGACACTTTTACCACTATAAAACTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003313TCONS_00003313Clytia hemisphaericatranscript
TCONS_00003312TCONS_00003312Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003313-proteinTCONS_00003313-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:257107..264581 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.76 3.16 2.12 1.38 2.89 2.3 2.59 2.93 1.87 2.59 3.96 2.24 2.75 1.66 2.59 2.85 3.11 3.42 2.72 6.24 4.56 4.81 2.55 2.83 0.79 0.9 21.6 22.38 12.06 7.12