XLOC_001846 (gene) - C. hemisphaerica

Overview
NameXLOC_001846
Unique NameXLOC_001846
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000026:345546..351788-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001846 ID=XLOC_001846|Name=XLOC_001846|organism=Clytia hemisphaerica|type=gene|length=6243bp|location=Sequence derived from alignment at sc0000026:345546..351788- (Clytia hemisphaerica)
TTTGAGACTTATGACGTCACATTCGTCGTAACTCGGGTTTTTGTAACTCG GGTTTTTGTAACTCGAGTTTTTGTAACTCGGATTTTCCGGGCCTCGAAAG TAACGGTCTGCAAAATCTGCGGTTTTTCAGTTGCAGTTCTGTGAGTTTTT TTGTCCTGCTTGTGAAATTTTCAGGAATTTGGAGCCTTTGGCTGAACGAG GTATAAATCATTTGTATCAATGACAGGTCGTTAAGTTTACAAAATATATC GGAGTTTTAGTTTCACTGCTCTGTCAAAGTTCTCTGCATCTCAGAAAATG TGAAGCCTCAAAGGATCGGTGGATTGAATCTAGCGCCCTCTTTCTTTTCA CGCGGTATATTTTTCGGAATTTTATGTGAAAACCCTTTCTAACTTCTTCG AGGCTTTAAAATCAATAAAAATAACCTTAGAATATTCTATAAATAAGCCG ACTTATTCATTCGTTAAAATAAGCCGACTCCTTCATTCGTTAAAGTAACC TTATTCCTCTTCTCTTTAGGTAAAGTATACTTTTGATATTATCGGCAAGG TAGCACTGGTTGCTAACCAACAAAACCAACAAAAGATATCAAGATGTTTG CCAAAGACTTGATCTCCTTGTTGTCGATCAATATAAAAAGTCGCACCGAT AATTACTCTGATCAATACAATCGAATTCTGGTCGTTAAAATTTTAATGGT ATGTTCGGTGATTATGAGTGTCAATTGGTTCAAGGTGAGTTTTTATTCAT TTTAAATACCACATACCACCACACAAATCACTATCTAAGAAATATCATGT TAGGGAGGTCTCATGTCCCTGGAAAATGGGTTACCTTATCGGCCCTTTTT ACGCCAACCCTAATTTTACGCCACGAGCCCAAAAATAAGGCCAATAAGGG CCGATAAAGTAGATCTTTTTTCATTGCCGATCAAACAAATATTTCAGGCC TGGGGAAAAATAACGGAGTTCAATCAACGATGGCATCATATTGAATCTTG AATTCGGATTCTAATGAATTCTCTTTCCATGTCAACCTTAGGATACGATT AATTGTATCAACGACGGTGGCTTAGATGGAAATTTTGTTTCACAAACGTG TTGGATTCAAGGTGTTTACATTTACGAAGAGTTGAAGGAACGCGTCGATG ATGTTGCATATTATGGTAAGATTAGATTTTACGTGTCAGTTTTGCCGGAT TTATAAGATATATCCATATCCAGCCTTAACTGTGGGATATCAGTGGTGGA TTTTGTTACTAAATGAGAAACACAACAAAGCTCTCTCTAATTCGAACCTC TACTATTCGAATCTTTCTTTAATTCAGTTTGTTAGTAAGGTCTTTCAATC ACGTCATTCATACGATATAGTTTTAACTTTATGTTGTTATTTGTACACAG GAATTTCCGAGAAACTTTTTTCGTTAGATGATAAGCAGAAGCCTACTAGA CAGAAAACCTTTTTTTACCACCGTAAGTGAGATTTTGGAAAACGTAAAAA AATCGGTAGTTGGCAAGTCCCAGAAACTCCATCATCCATTTTCTTAATCG TTACATCATTTCTGATATCATTTTCATACCTTAGGAATTCCCAAGGACAT GTCGCACGATGGTATGCTCAAAAACGGCGAGTTATGTCCTACTGAACGAA AAGGTGTTTATGGTAAAAAGGAACGGGATTCAAAATGTAAACCTCTAACA AAGACTTTTTTTTTACAGGTAAGATTATATTCAATGGCGGTCATCCTGCA TGTAGTAAAAATATTGGACATCCCCTCCCCCTTGACGTAGGCTTTTGCTT AACCCTCTCTCCGCCCTTCACGGTGTAAATATTATATGGATGGTACGTAG GCTTTTGCTTAACCCTCTCTCCGCCCTTCACGGTGTAAATATTATATGGA TGGTACCATATTGGATTAATCGTCTAACGTTATTTGGGTGTTAAGTGAGC TAGAAAGACGTTGTTTTGACGCTTGGACCATTCTCTTAGATGATGGACTG TTTAACCTTCTTCATAAGGGATGGGCAATGAGTGAGAAATTTACAAATTT TTGGAGGATTATCAAAACTTGTACCTGCTAAAAAGACCCCTTTTTCAAAA CAGATGCCCTAAACAGAAACTCGATGAGCGATATAACTAACGCCTTCAAA AACGAAAACTATCTTTGTTTTAAAACACTGTCTTGTTTCATGAATTTTAT CACAACTACGAATTAAAAGATTTATAACTGTTACATAAAAGAAAGAGATT TTATTTTATCAAAAATTTATGTTTTTTAAACCACGAAAATTTTTGTATTA TCATAAAACATTATAAATATTGGGACTAAAATCAAGACGTGGCCTTTTGT TGTACTCCCTTTGAAGCTATGCAAGCCAGGTGCCAAAAGCTTTTCAGTTT CCTAAAACTTTATTTTCTGTTTTTATACTTATAAAATATGTTGGAAGAAA TTAACACTTATATATTGATTTCTTCGTAATCAAATAAAATTCTAATTTAA GACCTTTTCATCCGCAAATATTAATGAAATCCAACGCAAATTTTACCCGG TAGACCCCCCTTCTTAATTTAATTTATAGAAGTGTATTTCTCAGGTCTAT TGACCTCTATGAAACAATCTTACATCTTTACAATTTATGGATCTTATCAT TCCATTAGTTTGTCAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTGTTAAACA GTTATTGGGTGTGCAATATCCATAATTTTGTTGAATTTCCTTGTTAGAAT TTTCGTTGATTTCCGCCATATTGTTGCATTTTCAGGATCTTACACACCAC ATTCGTACTCCCTCGTGAAAGAAGTCATCCCTGTCTCCATTTTAACTCCA TATTTTTATTTCCTTCATTAACAGAGTCACGCCTGTCCCAATTCGAGCTT CTCTCTATTATACCACCCTCTCACCCACCCTCGTTACTACAAGTTACCCA TGTCTCTGTTAAAGCCTGAATAAGAAAAAAATTGTATACCGAGTAATTTT ATTCTTGTGAATCCAGGCTGAATATCAGTGATAATTTCGTGAGTGTTATT AGAATCATAAAAACAGTTGCATGGCTTTAATTTGGATGTTTTGAGTTTTT AAATCCTAAATTGTTGAAATTTACTGGGAAAAATTTCCCTTGGGGAAAAA TTGTTCGGTCCGCCATCCTTTAAAAATCTCCACATCCCGAACATTTTTTA TCTCCTTAGTATCAATGGTTCCCGTTCTACCTTGCTGCCTTGGCCATCGT CTATTACCTCCCTTATGTCTTGCACATGTACGGAAACAGTGACATCATCA GTTTAAAGAAATCCGTCAAAAAGGGAGAAGCGACACCGGAAACCATCGTT CGGACGTATTTCGACCGGAAAACGAACCCGGTGCGTTACCATTGGTTCCG AGTGTTGTTTAATTACTTGATCAAGGTCCTCTACATGGTGGTCAATCTTG TGGCTTTTTATGGAACCAATGCTTTGTTGTATGGCAAATTCACATCATAT GGTATGTATGGTTAACAACCTTTATTTGAAATTGCTTTCTCAGTTTTGTG TGTAGATCTTCATCTCCTACGTCACTACTTCACGTTTTTTTATAAGAACA AACTATAGAGTTTGTATCAATTTCTTTAAAAGATCTTTTAATTTTGATGA TTCACTTTTTCAATCAATGGTGTAGGTAACAAGTGGATCGAATGGAACCG TCTTGAAAACCATATCCAGTATGATTACATGGGTATGCGTGATCACCCGA GGCCTGGACACGAAGTTCTGCCTCCATTTGGGTATTGTGAAGTCTACTCC TCGTCGTCTGACGTCCTCCGCGACCACGCCAACAAACATAAATTTGTGTG CGAAATGTCACAGAATGTGTTGACACAGTACGCTCTCATCATCTTATGGT TCACGCTTATCATTGGTATTGTTGTATCGATCGGTGGGTTTGTTATTCTT CTCATCGATCATTTGATCACTTTCGCTTTCATGGTGAAGCACGGCAACAT GGCGAGACGTATCTACGGCCGATTGACCATGCGGGAATGTGAGTATCTGG AGTTTATACGCAAACGAGATATCCCATTTTACGCTGACGTTTTACAGCGG TTGAAAGAAGTCCGCCTCGGATGTCGAATAGAATCAGGTTTGAAGTCAGG TAGTCTACCCACTGATTCTCCACCTCCAGGCTTCGAAGAATCGATGATGA AAATGATCTAAATTGGAAAAAGCCTCGATGTGACGAAAACATCGACTTAT ATTTTTATGGTCTAGAGATTTATTTGAGTCAAGACATCCTTCATTAGGGA AGGTAAAAAAACAAAAAGTTTTCTTGAAGAAGGGGATGGGATTTGCTATG ATTTTTAATCTACATACTACTACTAGTTCGGTCAATACCGTAAAATATCG ACATCTGTCAAACGTAATTTAACGGCATGACGGAACTTTTCTACGATGAA GACGGATTACACTTTTAGTATGAAACGTATGGATTTTTTGACGTGAATAA TTTTTATGGGACGTTTTTAGAAGAAGAGTATTTATATGACGCAGAAATTT CAGATGAACTTTTTAGAGAATTGGTAACTTTTTATCAGAAACAACTGAAC GCGGCGCTCAAACGCTTGTGGTGTTGGAACTTTTTGGATTTTATGAAGCA CAATCTCAATGGATACATTTGTGTTATTTTTATCGTTGCTATTCGCATTT ATTGGAAAAAAACTTTATTTTTTTTGAATTTTTATCTTTGATTAAAAGTA TATGGTAGTTAGACACATTTTATCGATAGAATTATTTTGTAAATACATTT TTCATGGTAGCAAATCATCTCACCGCCCGGGCGGTTTATGTTCGAATTTT GGTAAAAAAACATTTCATGGACAAGGCCTTGACAATTTTCAGATTACGAG ACCTTAGCGAAATTAAAATCAATGTCAATTTTTAAACAAATCAATTTTCA TTCTATCATTTAGATTTTTATTAGAGAATATATTATAGATAGTTTATGCA TTTTCAGTTGATTTTTACAATAAGAAAGTGGCGTTTTTAGGTGCTAGAAT TTACCAGCATCCTTTTTATCATCAGCATTTAATTTTGAACATTTTTCAAA CATAAATATCCTACATATACACAAAAGTTTTGTTAGATTTTGTTTCCCAG CTATAGTACGCATCAGAGCGACTTACGCATCCCCTCTTATATGGTTTGAT ATAGGGGATGCGTATCGTGTATGAAATTCCCGTTCGAGAGTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003336TCONS_00003336Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003336-proteinTCONS_00003336-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:345546..351788 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.24 1.89 0.48 0.33 4.26 4.74 70.4 70.33 43.13 27.09 45.79 51.08 53.31 49.41 59.41 80.4 33.03 34.66 2.18 2.89 22.12 21.27 14.73 16.62 19.69 24.95 12.71 13.51 2.87 3.09