XLOC_002185 (gene) - C. hemisphaerica

Overview
NameXLOC_002185
Unique NameXLOC_002185
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000038:479128..485797+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002185 ID=XLOC_002185|Name=XLOC_002185|organism=Clytia hemisphaerica|type=gene|length=6670bp|location=Sequence derived from alignment at sc0000038:479128..485797+ (Clytia hemisphaerica)
GTTGCTTTACACTTTTAGATGCAAATAAACAAATgacaaagctttaaaat tatacaaggaaaaatacaaaatgtTTGTTTTCATTATACCTTTCATTGTC ATAAGAATCTTGTACTCTTTGTATCGAAAGTTCATATTGACCGCAGTTCC AGTGAAAGATAAAATTGTTCTGGTCACCGGTGCATCTTCTGGGTTAGGCG AAGGTAGGTGAtaatattttttcctcttttctagGAGCTCAAGTTTAGGA TCGAGCTCAAGAGAAGAATAAGTTAAGGGGGTGATGTTTTcactaaaaac aaatttgagcTTTAATGACCAAATACATATTATTTAGCAATGAAATGATC AATTCTCGTCCATCTCTACTTTTGTTGTAGTTAAATCTATATCATGATCT TTTTAAAAGATATCTTCTGGACACTATTGAGGCTCCTTGTATTAttagaa aagtttgaaataatGGTTGGTCGGGCCCTAGTTGAAAGTGCCTAGAAAAG GTCTTATGAAATTGGTTTTGACTTAGTATAATGTATGATGTTAAAAATTT ACGAAATTTGTTCTGACTTAGTATTAtgttaaaaatttccattttaatta tTACTATGTTACTCCTCTCTGCCCTTTTCTTctgaattttgtatttttac caACTTTTCTTATAGCGTGTGCAAAGAAATTTGCAGAGGAAGGTGCAAAA GTGATTTTGTGTGCACGAAACGTGGTCGAATTGAAACGTGTCAAGAAAGA AATCTCTGGAGATGAGGTGATACTTTTTTTATTATGTATTCTTGATTTTA AATTGCAGACCATATCATAACCGGACAGAAAATTGGTGTAATCCAAAGCA AGATGTGTGCAGTGCATGTGTTAGCAATAGGTTTCTCTTTTGCAGACCCT CATCAAAATCCTCTTTCTAAGAGTTGCACACAAAGCTATAGGGTCGTTTA AATGTTCATAATAAAGGAATCCTAAATCATTTGAAGGGTTAGAAACTCTT AAAACTTTATACCTAAAGTAGGAAGTCTAAATAAGAAAGatacatacact tttttttataagaaaatttttgctgaggctcggctgttcttatttttttg gcactttgagccttgtattgttcttattttttcttattttttctaaggta aaaaacaagttttggttatttactttactatttagaggattttagaaacc agtgattctttttgctataactctctaactCAGCCTCTCaactgttctta aatttttcttattttttctaaggtaaaaaacaagttttggttatttactt tactatttagaggattttagaaaccagtgattctttttgctataactctc taactCAGCCTCTcaactgttcttaaattgttcttattttttggcatttt tgagcctcattgttcttataaaattgttcttataaaaaagaaagtgtaTT ACAACTTAATAGGTATTTTACAAAGTCTCATTAGAATGAATTCTCACACG AACGATTTTGCAATTATCATATATACTTTTTCTTCCACAAAATAGAATTC AAAATGGCCGGTAGTTTATTCGATGGACATCACACAGAAGAAGGACATTG ACAACTGTATCCAAGAAATCGAATCCAACCATTGTTTTGTTGACATTCTG ATCAGCAATGCAGGTGTAAGTCTTCGTGGTACTGTCATTGATACTGATAT TGAGGTTCACCGGAAGATGATGGAAGTCAATTATTTTGGACCTGTCAACC TTGTCAAAGGTAATAGCTAAACAAATAGTAGAAAAGCAACTCCAAAAATA TGCATCTTGTAAGGCTTGAAATTCAATACATAAACAAGAATAACACAAGT GATGTAAAAACGTCAAATTTTCGATTCTTTGCAAAATCGTCATcatgaca aataaaaaaaaattttcccaaggGTTTTCGGAGTTGCTTTTCTACTTTTT GTATTGAAAATTTCGGCTGGTAAAGGATTCTGGTAAGACCTATAATATAC TATTTTATATTCAATGATTAAACACTCGGCAAACAATGTCCTCTATGAAA TATTATCCTCTATGAAATATTATCTTGTGTACACAGCAATGACAATGCTC GGATAGGCCTTGGTGAACCTAGAATTTTCTACCCTAAGGTCTAAAAGTGT TGCAACTTTTCCTTCTTTGGACAGATTTCCATTCAGGTGGTTTGGGATAT TTGGCATATGGAAAAATTCCattgtcctgagcaaaatctcaaaatatttt tgcctgaATATTTCCCAAAGTCGAGATAattaagttacaagtttttgacc ataaaaaagcAATataatttcaacgtaagaaccgtgtgagaacccatttt cagaaattttaaagtttattATCTCGGCTTTAGAATAAAGTTAGACAAAA ATACTTGGCGATTTTACTCAAAACCACAGAGGGTTTCTCGAggcaaaaaa tctcaaaccatctaATTATCCCTTTTAAAGTAATAAAGTCTAAGTCTATA CGTTTTGTCCAGATTCTCCAAAGTCGATTGCAACCCTAAGCATGTGATac tgttagtttttttttcagttcatCGATTAATCGACTCGATATATGTGAAA AGAAGAATTTTCTATGCCTTTATCGATATTCATATAATCGATACACGATT CTTTCATTAATCTTTCCAGCTGTTTTACCATCCATGCTATCAAGGAGGAC TGGACACATTGTCAGCATTGGTAGTTTACAAGCTGTTGTTGCTATCCCTT ACAGATGTGCTTGTAAGTAATAATATTTATATTAGGAGACGCGTAATTAA CacgaatggaaaattttcgtgttaataaaaaccccgtTAATTTTTGACTC GTTGCAAATTTACCCTTCATTTATTAAGGGATATGTTAAAAAACGTCTCT TGATTATTTCTAGtgttaattttcaaaatccccCTCAGATTGAATCAGAA ATAATATTTGATACCAAATTCAGAATTATCTTTCGTGGGCTGGGTGGCTT TTTTGTTAGAGCAATGGAGACGATAATATTGTATTTGATAGGCGCTCACT CTTCCTCTTTCTCATTGACGCATCATCACAagcattttttgttgaaaaac ccTTCTaaacaagttaaaaaaaatccaCAAGGACCCTTTTTTGTATGAAA TCATAAGAGATTATAGTTGGTAGACCCACTGACTTGAGATATCACCCTTA TCTTTCCCATAGACGCATCTTCTAAGCATGCATCACAAGCGTTTTTCGAT TCACTCCGCGCAGAAGTATGTGGTGAAGGAATCAACATTTCAACCATTAA CCCTGGTTACATCCGGACAAATCTCTCCAAGAATGCATTCACTCCGGACG GTGAAAAACATGGAGgtacaattttaaaatcttttgctTGACACCAAAAC ACAGTTTCCTCAGATAGgacaaaaaaagttttacaaTCGTCTCtctgtaa tttaaaaaaattctcaataaGTTCAACGAAGAGCCTCAGTCAAGTAAAGA TCAAATAAGAGACAATCGACAGAACTTTTGAGCAAACACTTAATTTGACA CACTTTATGGGAACATTTCCTTTTGATGAtaaggaaaaaacatttttagt ttataaaaacgggggggggggctaataaGGCCCGGGGGaagttggaaaaa atttgaaaggcGGCGTTTATTGGGCACCTGGGAGTAAAGAGCGGGGCTTA TATAATTTCATACGCTTACTAACCATAATTGGACCCTAAAATAGTTGCTC GACCCATTTGCAATAAGGAAAAATTTGAGGAAATAcagttactcttaggt tccaaataaacgggggggggggggggctaataaGGCCCGGGGGaagttgg aaaaaatttgaaaggcGGCGTTTATTGGGCACCTGGGAGTAAAGAGCGGG GCTTATATAATTTCATACGCTTACTAACCATAATTGGACCCTAAAATAGT TGCTCGACCCATTTGCAATAAGGAAAAATTTGAGGAAATAcagttactct taggttccaaataaacgggggggggggggggctaataaGGCCCGGGGGaa gttggaaaaaatttgaaaggcGGCGTTTATTGGGCACCTGGGAGTAAAGA GCGGGGCTTATATAATTTCATACGCTTACTAACCATAATTGGACCCTAAA ATAGTTGCTCGACCCATTTGCAATAAGGAAAAATTTGAGGAAATAcagtt actcttaggttccaaataaacgggggggggggggggctaataaggtccgg ggggttggaaaatttttaaaaaaaaaattttttgaattaaaaaagggggg gggggggggctaataaggtccggggggttggaaaaatttcaaaaaatcaa caagCGGCATTTCGTTTTTGACACACCCTGATTAGGAAATATTGGTTGCC TACTCTTTCGTCTTATATTTAACCTTTGCATTATAATTATAAGCGTTAAA AACGCTTTCATGTTGAAGACCGGGTGCTGACTTCAAAGAACAAGACTTTC TTCCAGTAGcaagttttacaaaaatcaTTTCAAGGAAGAACTTCCCTGCT AAAAGTAAAGAACATTAATTTGTAAGCAACTCCTTACCAAAGGAATGTaa aaagatggaaaaacagcttttctgattactcaaagttcaacgatcacttc tattgaaaattctattgtaaaaacgttgattaggtcattaaatgaaagtc cagaaaagacggcccgccatacaaatcggacggtttctacatgatttgac gataaaaatgaaaattagtttttcctttttcgccGATTACTAGTTGAATT TTTAGGAGTAAGGAGCAATTTTTTTACagtgtatagcaaaagaaattctt aacgcaatgatattaaattgattcttgtaaaactgttaGAACtcaagtaa aatcaagatgaagttagaATTTTCTCGAGCTATGGCCCTCTATAtaatgg tgcggtcatgatgcggttatatcagtagaatcgctaggaaattctgagca agaagatataggtactttttcgtataggagaggtgtacccaaaatataag ccctaaaagtttgcgcataattaggcttgaaacaaaagaattttgtcaca actcGCTAATTATGcggattttttatagcgacaacaaaagaaccCTATTA ACTCGACAtcaactcccttaagggcaagagacctggtatatggcgagccg tttttccattgttttcaagaaactgtttttccatctctttacattcctct gtcCTTACTaataaattccttattttaacattacagtcaactctctctaa ttcgaacctctattattcgaatctccctgtaattcgaattaaaatatttc cccaaattttcaaatttttatcttatttttataCTTACAGTAATGGACAA AACGACAGCGTCGGGTATGCCTCCAGAGTACGTCGCCGAATGCGTTTACG ATTGTGTATACAAACCAAGAAACGATTTATTGTTATGTGGATTCTTCAAC GGACTTGGTCCAATGACGCGACATTGTTGTCCGCCGCTCTATCACTGGTA CATGGCTCGGAAAGGCCGAAAAGAGGCcgaaatgtacaaaaagaaaacat aatgGTTCTTGAGCGAAAATGTATGGTctagttttaattttcaagtagCT GCGAACTGAGTTGTTCAACCTACCAAACTAGACTGTCGAATTAAGGCTGa ttaaaaattgttgttttgattgatgAACTTTGGaaatagaaatttaaaaa tcaaatggATAGCTTGTTCGACTATTTTAGTATTGGATGTTCAATATAGA ATTTATGATAATTTACATGGATCCATAACAATAGAGGCTGAATGACCTGT TCCTGGTTTCACTTGTTACCGCTCCTCGTTTATATTGCAACTCTTGCATT TTTTATACTATACTTAACATGAACCCTGACGGTAGGAAAAGTAATTTTTA CATGATTTCTCTCCTTGAGATTATAGAAATCTCGTAGAAATCCTTGAAAA AGCTTGTTACAGGATCTTTCGAAGTTCTCAGATACAGAGAATTTAGAgtt aagaaaaaacaacatatgTTTAACGCCCCTAACGTACTCAAAGTGTTAAC GTTGAAAACaccccctgtgtcacagaccggGTGAGACTTCCTACCCACCA GAAAATCGGGCTAAAACTTCGTCACCGGTTGGAAGAATATCCTTTAATTA CAGCTGCACTGGAAAGTCGACTTTGTTTTTagccccatttgaaattcaat aggGAAAATTGCATTACAAAACCATCCGAATTGGATTTTTTGCcctggga acaatagaatttctatcccgaTTGGggtttcaatagaaattttcatcacc atcgtgggaagaagttccaccggggtgTTTGGAAGCTCGTTTAGCCTTGC GAGAGATAGTAACGGCTACATCATGATTGTATCACCAGGCACTACGGGAA TTAAAGGTTCGATTAAAATGCCTTTTATAAACTTATAAACTTAGCCTCTG AAACTCAGGGTTTCACTATCAGGTACTTGATTAAAGTCTTTTTgcaaatg agaatttttttgtagatttttgggATTTATTGATGATTTTGTTGATATTG TATACATTTCAAATTTATAATTGTTTTATACAGCTAGATTTTTTGTACTT TATAAAGAAAGTGTTCAGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003897TCONS_00003897Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003897-proteinTCONS_00003897-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:479128..485797 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DHRS7BPREDICTED: dehydrogenase/reductase SDR family member 7B isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.5 16.78 5.65 4.41 15.9 11.97 12.58 14.06 14.14 16.37 18.33 10.74 15.04 16.81 11.33 12.29 14.59 15.47 15.04 14.5 15.89 16.47 18.22 18.5 21.01 22.6 4.64 3.85 23.26 20.14