XLOC_002204 (gene) - C. hemisphaerica

Overview
NameXLOC_002204
Unique NameXLOC_002204
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000038:207188..215642-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002204 ID=XLOC_002204|Name=XLOC_002204|organism=Clytia hemisphaerica|type=gene|length=8455bp|location=Sequence derived from alignment at sc0000038:207188..215642- (Clytia hemisphaerica)
TGCATAGATTTCCCATTTTTAAAATTGAATATTTATAGAGTAAGAATAAG
CTGCTCGAGCTGTTTTAAAAAAGAAACTGTATAGAATATCAGGAAGAAAG
AGTAGAGAAAAGGGGAGTTTGAAAATTGGTGAAAATCCTGTATGAAAGGT
AGGTTACGAAAGTTGTTTTGACAAAAATTGAAAATACTTTTTGAAAACAA
ATTTTAACACAAACTTTACAAGGAAATTTGTGAGGCCTTGGATTGAGGAC
CGAACTTGAAGTGATTATGGTAAAATAATGGAGTACATTGAGATTTAGCC
AGAGTGTTAGGCGTGATGTCTAACCAACCTGCAAATTTTCACTACACTTA
TACAATACAGACGTCCAATAACCCCCTTCTCACAGACCCACTGGGAACCC
TTCCCACTGGAAAAATTGGCAAAAATATCTCCCCAATTGTGCTATTTCTT
CTATCCCTCTGAATCTTCTGGCTAAAAAACAATGGAATTCAAGTCCCCAG
CCATAAAAAATATGGGAATATCATTCCCAGTCCAATTTTGGTCCGGTATT
TTTACCACTACTAGCTGATAAAATCCCAACGGGTCTGTGAGAAGGGGGTG
TCCCAATCGCAAACAAATCTTCGTTGCAGTTCGTTTTATCGCATCCAATC
AGATTTGAGTATTAAGGATGCCAATGAAAACGACAATTTCTCGTTTTTGT
GTTTTGATAGAATGTTACGCTCCAAACAAAGAGAAAAAGTTTGTCATTTT
TGAATGCTCTCGAGAATAACGGCTACCTTAACGGAACTAATTTTGGCGGG
AATTAATTTTGGCGAGCGGCGGCGAAAATATTTAAGAATTTTAATTTTGG
CGGGAACTAATTATGGCGAATAGTGAATGTTTTTAATTTTGGCGGGAACT
AATTTTGGCGAATGACAGTGTAAATCTGTTCTATGTTGCCTTATTTTGAG
CAATTTTGATGAATTTCAGGGTTTATTTAGGCAAGGAAACAAAAAATTTA
ATTTTGGCGGGAACTTATTTTGGCGAGTGCGCAAAATGTTTAATTTTGGC
GGGAACTAAATTTGGCGAATTTCGTCTAAATTCGCCAAATTCGCCAAAAT
TAGTTCCCTTTAAGGTATGTTATTGTTTTGGCCTTCGATAACAAAAAATA
TTTCTTATCGTCTTGATTCGATTTGTGGCTGACACTGACCCCTAAAAAGA
AAGATCTTTCGGCAAAGGCGAGCATGTCTTTACCGAGTTTGTTTTCAACA
GTTTACATCTGATTAAATTATGCTATTAGTTTTCGGTCTGAATCTTGGCA
CGTTGAGATTTACAGTGGTTTTAAAGCTAAATATATTACTTGATTCCAGC
TTAACCTATTCTTCTTGCAGAGAATAAAGGAATACAAGATGCCTCCTAAA
CATATTATGATTTCATACAATTGGGACATCCAAGACCTGGTCAAGAAAGT
TGTGAGTGGGTTAAAATCACGTGGTATCCCGGTATGGATGGACTTAGATG
CCATGAGTGGTGATATCAATTCAAGGTGAAAGAAATATATACATCCCAGT
GTCACAAACCCGGGGGACTCAAACACAACTGGAAATTTGGCCCTTTTCGT
TCCTGGTGGGGAAAATACACTACAATATCCCAGTAGGAAGTTGATCTTGA
TTTCATCAAAAAAAATCATATCGCAACCATTTTGATTCCATATAACCATT
CCTCATGGTGAGCCGGGACAATAGAATTTCGATCTCTATTAGGATTTCGA
TAGAAATCTTCATCCCGCTTTCCACCAGGGCATTGTTACAGGGATGTAAA
TACAGTTGATCCTCTTCTGATTTTCAGACTTATACTTAATTGTCTTACAG
TAATACAAAAAACTTTTTCGTTAGTTTTAATTTGCGAAATACTTTAAAAC
CTGTCTCGCTGATGCCTTACCCGTTTTTTTTTTTTTTAAGAAACACACTT
TTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAAACATCTAAGAA
ACATGCTGAGCCTGAGAATGAGAAAATAACATTTTTTAATTCGGTTTTTC
TTAAGACCCTTCCAATCCAGCCTTCCATGAGGCTGATTATGTCAAAAAGT
TTAGAAACATGTAAGAAACATTCAAGGCTCAAAAGGCCGATTTCTTAAGA
AACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAAAAACGTGT
ACAAAACGATTCATTTTTACACCGACGACAATGATTTGGATAGAGCGGAT
AGCTGAAATTGCAACAAGGTCTTTAGGCAAACTAAGTGCTCATAAGAAGT
TCTTATTGGGGACCCCTATTTAGAATTATACTGAAATTTATATCTTTCTC
GAACCCAGTTCCTTAGTTTGCTTGATACACCTTTTTGACCGCAGTCGCGC
GTTCAGGTGCGTGCCATTTAATTATTTAATTATCCCACTAAACTCGATCC
AATCCTTTTTTGACACATTTTTCTATTGCGAAAAAAGGACTGGGACGGTT
TTAGTGGGATAAAGCGGACAATTGGCAGCTACGGTCGAAAAGGTGTATTT
TGATAGCGCTCTCGATTACGTCCATCAATAAAATAAAAGTGGTGCAATAG
TTCATATTTTAATAAACTGTGTACTTTATTTTCACTTTTAAACAGCATGG
CGGAAGGAGTAGACGGTTGCAAGGCTATCGTTTGTTTCATGACACAAAAA
TATCAAGACAGTAAGAACTGCAAACGAGAATTGACATACGCTGACCAACA
AGAAAAAGATATTATCCCTTGCATGGCTCAAAAAGATTACAAAGCTCAAA
GCTGGTTGGGAATTGTCACTGCTGGACTTTTGTGGATGAACTTCAGGTAC
CCTTTGATTCTCACATAATCTCACAGCAATCAACAAAATTATTTTTTCAG
GTTAAGAAGGTTGCGAGGTGGTTCTTCGAGTATCCATTTTTTCAAGAATA
ACTTATTCCAGCAATCTACTTTAATGGGATATACTTTCGCGGGGATTAAA
TTTCGCGGGGACTTAATTTCGCGTGTAGCACTATTGGGTGGGAATATTTT
CATGATTTTTTGACTTCTACTGTCAAATCATGCATGTTGGTTGTTGAAAT
ACACATTATTTGCGCTTCTTTGACGCAGGTAACCATTCAAAAAGTATTAT
TTTACATATTTAATCCCCGCGAAAGTTTATCCAATTAAAGAATAGACCTA
AGAATAAGAAATTAAAATTCACCGACTTGGCAAGATATTTAAAACTTAAA
TCTCGGTTTGTTCTGCTTTGATAGTGTCATATTTCTTTGATAATATGTAA
TATTTTCATATTAAGGGGGTAGTCATATCAGATTTTGAAAATTGGTGAAA
AATTTATCAATTTCGGGATTTAGGGCTTTTTAGGATCCTTTATCCTTCCT
GAACATACCCTGAAAATTTCAAGGCCGTAGCATAAATATCTGCCGATATA
TTGGGTTTCTTATGAGCCGTGATATACAATTTTCTCCTTAGCAACGGGAA
ATCGCATCCGTTGCTAGGGCCTCATTTCCGTATGGGATGAGCTGGAGTTT
TTACAAGATACTTCACTAATTGGTCATTCAAAGTGATAGAGATGACGCGT
TCTTTAGAAAAAGTAATAAGATTCTTTTATTACATCTTAACGACCACCCA
AATCAAATAAGAGCTTGTAAAAACTCCAGCTTGTCCCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTGGAAAGTTTCATT
GAAAAATATTTACTACTTCACAAGATATAACAAAAAGTTTAAAAAATGAC
ATTTCAAATTTCTCATATGACTACCCCCTTAAATCTTGATGATGTGTACA
GATTTTTATCATGAGAAAATTTGGTATATTGCAAATGACATTGTCTCAAA
CGTTCATGGATTGTTTACCGTGAATCGTATATCGGGTTTTCCTTGAAATA
CAACCTGTGATTCTCTAATTCGATCTTCAAGGGACTAAAAATGTTCCTCG
AATTACAGAAAGATTTGAATTACAGCGAATACTTTGTACAACTTTCCAGC
TAAGGGGACCAATAATTATATTCGAAATACAGAAAAATTCGAATAATTTA
ATAGAGGTTTGAATTGAAAATCACTGCAGATAGATTTTTTCGCAATACGC
TATCACAGTGTAGGGGGGGGGGGGGGGGGGGGGGGGTTTGTAGGGGTTCG
AAATACCGTTTTCCCGTCAAAATTTTTGCTGAATCCCGGAATCCCGAAAA
TTGGAAAAATAATAACACCGTCACACCGGCTTGTACAGGGCAAAAATGTA
CCTAAATACCGTCACCGTCTGATTTTAAAATACCGTTTTCCCGTCTCTTT
TTTCGTCAAATCCCGTAATTAATACCGTACTAAAAAAGGGCCTATCCCGT
CACACCGTAAAAGTACATAAAAGTACAAACCCTCAGTGTATATTCAGTAT
AACTGACGATAAAGATTGTATGTTCGAATCTTTTTCATTTTTTTTTTATT
TTCACGTTGTAGGGACGATAGTCAACTAGAAACCAAAATTGATTCTCTAG
CTAAGGAAATAATCTCTCAAACCGGAAGTGACTGGATGAAAGGCGTAACA
GGCTCCACAGCTAGGCCAGCCGTTGCGGAATCAAGGCCAAAAGATCTGGA
AGATAAAGTGAGCCGGGCTTTCAAGCATTGCTCAACTGGACAGTTCTTGG
CAGAATCGGGTAAATAAATTATTATTCAACATCAAACTCAGGGGGGAGCA
AAGAACAAACCGATATTTTCTGAAAGTAGATTCAACTGGAGTCAGTTTTT
TGTCAATTTATTGAAGCATGGGAACAAATGAATTCCTGTATCATGCCGAA
AAGAAGCAAGTGTATTTGAAACAAATTGCACTGAAATTTCCTTTTTAACT
GCCAAATGAATTTTCTTTCTATTTTCAGGCCAAACAAAATTTCATCCAGC
CAGTGGCAACAGAAACAACTTGGTCTTACGCAATCAAGCAGAAGCTACAA
GTTTCTGGGTGCAAGAACGAAAGGGTGGGAAGGGAGAAATTATTTTCTTC
AAAAATTACAGCACTAATGGATATTTAGGTAACACAAATTTTACTCTTTT
TAGCATTATCAATCACCCTCGTTAAGCTTGGGGAGTCGAGCCCTTTTATA
TAAATGACCTTATGACCAGGTCGAGCTTGCTCGGCTTGCGATGACACGTT
CTCTCCACTGTTGCTGATGTCCCATGGCATTTGGAAGGTCTTCCTTTGAG
CAGCCTGCACCATCTCTCAGTATGTTGATGTAGGTTTTGTTTGGTCTACC
CCTTGTTCTTTTTCCGTGAAAAGGCTCCCAAAGTATTACCTCTGAGGCTA
GCTCATTTTTGCCCCGCCAGCCGTGGCCAGAAAAACGTAGGCGCTGTTCT
CGGATTGTTGATGTTATAATGATCTTATACGGTCACATTAAGTCATATCA
AGAATGAAGAATGGCTAGTGACTGATGGTAAATGATATATGATACCAAGG
AAATTTTAAACCGTCCAGTAACCTGAGCTCCTTGCATGTTTTTTATCATT
ATTATGCTATAGTTCTTGTTAAAAATCCCTCCAAAGACTGTTAACAGGGG
TTGGAGCGGAGGATTATTGGGCTGTGAGCTACCGGGCACGTGTCGAGCCT
CGGACTTTTAATAGAACGAAAAAAGGGAACTTTTGTGTTGGGACTACTTT
GACCAAATTTTGTTTTTTCAAGGGCAAAAAAGTTGAAATTTTCCAAATTT
TCTGACCCTTAGTGTGACTGAAATTAGCCTCGTTCGAATTTTCTAATTGC
AGGCTATGATGCAAACGGCGACTACACTTACACCAAAGCCCAACATTACG
GCGCCGAAGAGTGGACACTGAAGGTTGATGAATCTGACAATACAGGAAAG
AGGGCTGTCGTTATTTTCGCCGTTTACGGTAAAAAATATCTCGGAATTAA
AAATGGAAAATTATCAGGATTCCCAAGTCTAAATCCTGCTTGCAGATGGT
ATTTGGAATAATTTTTTAAAATTTTTGTTTGCTATTGTTTGAAAATTGTC
TATTAATATTTTATTAAATTTCCTAAGGGTATAACCTAACTAACCTAAGT
AAGAATTGTAGTGCGTAAATAATATTTAATTTTTTCTCAATTAAAACTTG
AATCTTAAGGTGGGAGTCACATGAAGGATTGAGAAAATTGAAATTTTACA
TTTTTCATCATATCTTTTGAAGCAGAAAAGATTTCTAAATAAAACTTTCC
AGAAATGTAATATAACTATAGAGAATGTGAAAAATTAAAAAAAAATTCTA
AAAATAGCCAAGACGGGGGTAATATCAGCCAGGGGGTAATGCACTATCGA
AATACTATGGCAGCGTTTTAGAAAAATCTATAAAAGCTATTTCAAAAATT
TTTTTTGGAGGTTGCTAGTATTTGGATAAGCTGTGGAATGAATGGAATTT
TTTTTCAAAATTTCATTCCAGGGGGTCTGGAACCTTAAAAATGGAAAATT
TAAGTTTTTTAGAGTTTAAAAATTGAAAAGTGATTTTTTCAAAAATCTAC
TCCATTCATTCCATAGCAAACCATAAATGGAGCAACCCCTGAAAATTTCA
TGATCATAGCTCTTTCCAATCCTGAAAAAACGTTGCCAAGGTGTGCGAAA
ACCCCCTGAAACCTATTTTGAGAAAATGGTCCGTAAAGTCAGAATTGAGA
TATATATCTCTATTTCTCTGTAATAAATCAACCGTTTTACAAAATTCTTT
CCGTGTTTGACTAAAATGGAATAAAGTACTACTTTATATACTTTAGAAAG
GGCTTAGAAATACCAAAATAGTCCAGAAATTCCAAATTATCACTTTCACG
TGATGCGCGCCAATCCTTAAAATTTTGTGCCAAACTCCACGTCAACATCT
ATTTAAGTCAATTTTAATGTGTTTTCACAACAAAAACCACATTTTCAATG
TAATAGATCAACCTAGTGTATTTTCCTCACTGCATCTGTCAGTTATAAGT
TAATTTAAAGTTGATCTGTAGTGATACAAGAATCCACTTGTACTTGGACG
TCTAGCCGTAAGCCGTGCACAATTTCTCCTCGTGAATGTAAATAATCCAG
AGGGTGGAGGGAGCGTCCCAGACCTTCAATAATTCATCACACACAATTGT
TAAACCAGCCTCCAGGCTTTCAATTTCCTTAACACTTGGATCTTTGAATA
GATACATCATTGAATATGCCTTCGGTCCATTGTTTGTTCTTCAAAGTTTT
TCGGTGTCAAACTAAGTTCATCGGAAACGTTGAGTTTGAGAATCAAGTCT
TTGGTTTCACCTAGCTCAAGCTTCCTTAGTTGAGAAGAATGACATTAAAG
AGCTAAAGATGTCATCAGTCAGTCCAACATTGCCAAATTCAAACAGTTTT
CTTGTCAAAAACACTGCTGACAGCCTCCAAATTTGTGTGTTTTTAAAAAA
TATTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003943TCONS_00003943Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003943-proteinTCONS_00003943-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:207188..215642 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.23	2.46	4.32	3.46	22.03	20.35	76.44	74.99	119.28	133.25	81.1	76.74	13.73	13.03	7.96	6.86	9.78	11.47	12.84	13.58	20.01	19.42	11.35	12.05	15.99	14.46	101.42	89.39	6.2	6.71