XLOC_002266 (gene) - C. hemisphaerica

Overview
NameXLOC_002266
Unique NameXLOC_002266
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000039:461096..463642+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002266 ID=XLOC_002266|Name=XLOC_002266|organism=Clytia hemisphaerica|type=gene|length=2547bp|location=Sequence derived from alignment at sc0000039:461096..463642+ (Clytia hemisphaerica)
AGCACGGCATGGAAGGTCATTTGTGACGGACAAAATATGAATATCAAAAA
GGGATTTATAAAAATTCACTACTCAAGAAAATTATTTACTCAGTTTACTT
CGAGCAGAAGAGACATAATTGGATTGAAATGAACTTCGTACACGTTTTTG
TTCTTTTGGTGGTTTTCGTCAACAAAATCGAATCAAAATGTGACGCACTC
ACTCGATCAGTTAACGGTCAATacaattcaaaattcattttaaatttgGG
AGATGGATTTCGTTCAACAGATTTAACGATCAAGTTCGTTGACGTTGTAC
AGAATGTTGATGCTTCGCATAGTAAAACACCGAACGCAAAGAGTATTATA
GATGGAgggaaaactttcaaaataacaGGTGGCTTCTCACAAAGAAGAAT
TGAAGTTCACGTCAAGGGTTACAACACTAAACTTTCATCAATCGAAGCAA
CAGGGATCGACTGCAACTTTGAAGGAAAACAATGTAAATCAAGTGACTTT
GGTGCAGCAAAATGTGAAAGAATGCTTCGAGAAAGGACTATTGAGCAAGG
AAAGATTCAAAGTGGAATTTGGTTCACAAGCGGAAATGATTTTCGCTTTG
GTGCAAAATTGACGGTAAGTTAGTGTAAAAAATCAACTAAAACCTCGCCA
GCATTGATATAACATCAATAGTTTCAAACGAAACCAAAATCcttattttc
acttttaatttttagtttgGTTTTGAAACAGCTGTCCCAGACTTTCACGC
ATGGCAAGGGATCAACAGACTCTATGAAAAACCACaatgtcaaaatattt
tccacTTTCAATCACAACAAGGAATGGTTGCTGGAGTATCTCGACTTTCT
GTCAAATTTCACTACTCGCCACCTGGCAAATTAGTTTACATCGCTTTTGG
GGATGTAGAATGTCTACAAGTGTGTGGAACAAAACCAGACTGTCTTCTTC
CAACAACGCCtacaacaacaaccactacGACCACAACAACTACAGAAGAA
CCCAAAGTAACCACAGAACCCGAAGTAACCACGGAAGAACCCGAAGTAAC
AACGGGAGAACCTGAAGTAACCACAGAACAACCTGAGGCCACCACAGAAC
AACCCGAGGCCACCACAGAACAACCCGAAGTAGCCACAGAACAACCCGAA
GTGATCACGGAACAACCCGAAGTAACAACGGAACAACCCGAAGTAACAAC
GGAACAACCCGAAGTCACCACGGAAGAACCCGAAGTAACCACGGAACAAC
CCGAAGTAACAACGGAACAACCCGAAGTAACAACGGGAGAACCCGAAGTA
ACCACAGAACAACCTGAGGCCACCACAGAACAACCCGAGGCCACCACAGA
ACAACCCGAAGTAGCCACAGAACAACCCGAAGTAACCACGGAAAAACCCG
AAGTCACAACGGAAGAACCCGAGGTAACTACGGAAGAACCCGAGCAAGCC
ACGGAATCAACACCTACGACAACCACTCGAAGAAGACCTATCATTGCCGT
CTTAGAGGATTTCGAAGtgaattaaaagaaaaactgttttttattaTCGC
TTATCTAGAAAACATGGAAGTAAAGGACGATTTTTGTCACATATTGTCTT
CTACCATTTCTCAAGCAGACTTCAACAATTAAAGTTTGTCTTAGAAGTAT
GTGGAAACTTTACTTTCTTAACAATTTCTCAGAATGCTTTAATAGTAAGC
TATGCATCGTTGCAAAGATATTTTAGAGGTGAAGAATCTAAAAGATTGTA
ACTTACTTTAGTACtaagtaaaaaaaagtaaagcGTCCACAAATACTTTT
GATACGCGGATTTGGGtttcatccgcgaaattaagtctcaaTGGAATGTT
TTCAAACAAATATCCTGTCAAATAAACTACTTTTtcaatgtttactggca
tcaaagaagtgctAATAGCGCGTCTTtaaacaaccaacatgcatgatgtg
atgatttgacagtaaaagcaACGAActcgtgaaaatattgtctcccaata
gtgccacccgcgaaaatCTATCCTATTAAAGTATGTATGTCAACACATTG
CAAACAATTTGGTAATTTTAGATACCCCATTCTCACAAACCCTGCACAGA
CTCGGTAggatttttgttaaaaagaacGGACCAAAGCTCGATGGTTATTG
ATACTCCCATGTTTTATATGGCTGgagaattccattgtttttgagcaAGA
AAATTCAGAGGGGAAGGACGAAATAGCACAATATTATGCAGTGAGGATTT
TCTTATCTGGTTATTTTCAgcagggacaaaaattggagaaaaactTTCAG
ATaggaacgatattttggccaatttttccagtagcAAGGGGGTCCCAGTG
GAGTGGgtatgtgagaagggggtgttttaagttttttttaaacctGCATT
TCAGCAAGAAGTAAGTGAAGATTATTCTCTTCTACCAAGAAAACATTAGC
TTATAATTTTTAATGAGAATTtactatggcgcgccaaagcggaaataaat
actatctttcatttcgcgacactatctttcatttcgcgacactatct
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004034TCONS_00004034Clytia hemisphaericatranscript
TCONS_00004035TCONS_00004035Clytia hemisphaericatranscript
TCONS_00004036TCONS_00004036Clytia hemisphaericatranscript
TCONS_00004037TCONS_00004037Clytia hemisphaericatranscript
TCONS_00004038TCONS_00004038Clytia hemisphaericatranscript
TCONS_00004039TCONS_00004039Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004035-proteinTCONS_00004035-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:461096..463642 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0.1	0.07	0	0	0	0	0	0.02	0	0	0	0.02	0.14	0.21	0.08	3.21	5.61	0.08	0.48	13.49	12.88	7.04	9.89	6.6	12.76	1.31	0.11	0.98	0.45