XLOC_002372 (gene) - C. hemisphaerica

Overview
NameXLOC_002372
Unique NameXLOC_002372
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000041:234889..239302-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002372 ID=XLOC_002372|Name=XLOC_002372|organism=Clytia hemisphaerica|type=gene|length=4414bp|location=Sequence derived from alignment at sc0000041:234889..239302- (Clytia hemisphaerica)
CTTCGCCATGTTCTCATATAAGTTAATGTCATCGTTAGAGGTGCATTCGT
TTCATTCTATGAGCTGTTTTGTGTTTCAGGTTGTATAGAACTTGTATTCT
CATTGGTGGCTGGTTACTTTCACAATGAGGTTGTTGACGTTATTGGCGTT
AGCGGTATTGGCGGTGGGCGTTCTTTCCTCAACTTTCAATGATGAAGAAG
AAAATCAGAGATCACCGAGGATCAAAAGATTCAGTAAGAATCCCCAAAAA
TAGTAATAAAAAATTACTGCGCTCCCGCAGTTTATGCTACAGAACACACC
TGTGTCACAGCCGTTTAGGCCCCAGCCCCACTAGAAAACTTGGCAAAAAT
TTCATCCCCAGTGGGAAAAATACCCTAGAATTTCAGCCCCAGTGAGAAAT
TGACTTTGATTTCATCCCCATTCGAAATTCCTTGTTTAGAAATTTCACTC
CAAAACCATCCCCATGGATTTTTCAACCTTGGAACAATATAACTTTCATC
CCCATTGAGATTTCAACCGAAATTTTCATTTCCGCCTTAAGGAAAAGTTT
TACCGGGGCTGTGAGGGGGTGTTAAAGAACATGAAAAGAGACTGAACATT
CTTTGCTGCTTGGAAATTTGATTTTTGTACGTCTGAATTTCAGGTCTTTC
GAAGAAATTCAAGTTTTGGTTCAATCGAGACAAAGACAAGAATGAAGAAG
ACAAGAATACTGAACGCAAAAAGAAATCTTTCGGTCAAAAGATCAAAGGT
AATGTGAAACGTCCTTATTTTTCTTCTTCATTTCCTTCTACGTTTGGGTT
GAGATGAATTGAGTTGCCTCGAATCATTTAAATCCTTTTCAACGTTTCAG
ATGGATGGACGAAATTCAAAAGCTGGGTCAAGAAACACAAGAGCAAGAAA
AGTAAGTACATTTGCTGCGAATCTTTGAAAAATGATATTAACCAACATCT
TAATCATAACTCTCCAACAGTCAGGGATATGTTCAAATTGGCTGATCACT
GGCTTATCGGTTATTTGACCTTACGCATGCGCTTAATTCAATTTTCTCTC
AAGAACTAGAGTTGATCCAAAGTCGAAATTCGGCACACATTCCTCACACA
TAAACCAATTGATATTTATTTAAAAGAAGACGCGACTATTGATATTTGGA
AAGAAATTCACAGCAATTTTCTAGTATTTAGGCTAATAAATTAACCTATA
TGATATTGTCTAATCAACCGATAATAGGTTAAACAACCGATGATCGGCTG
GTTTAAACATATTTCTGACCGTCTAATATTTTAAGTTACTTTATCGGCCG
AAACTTAGTCGGCCCTAAGTGACTAGATTTTGGCTTGGTGACTAAAATTT
GGGCCAACTAAAAATTTGGGCTGACTAAAATTAAGGCCGACTAAAAATTT
GGGCCGAATTAAAAGTTTATAATTAAGCTTTCCTTATTTTCCAGTATTTT
AAGCTTTCTCCTATTTTCCATCTGCTTGTAAATTTAGAAATGGCCCAAAT
TTTTTATCTGTCTTAATTATTAGTCGGCCCTTAGTGACTAAATTTTGACG
AGGCTGACTAATTATTAAGGCCGACTAAAATTAAGGCCGACTAAAATTAA
GGCCGACTAAGTTTTGGCCGATAAGGTATTTAGCTTGAAATTAAACTCAA
CTAATAATACCAATCAAATATACATTCCCTCTCACAGACAACCGATACCA
AATGAAGAAAGAGGATGCGAAATCTCAATTACCAAAATATCTTCGTGATA
AATATGCTCAAGGGAAGAAAGTGTTTCAGAGTGAACTTGATGAAGCCTAC
TTTAAAATGATGAAACAAAGAAGGCGTGGTGTCTCCATTATTGATATCAT
CAATAGCATCAACAAAGGTGTGGTTTGTTTATGTTTGTTTGTTTGTTTTC
TGATACTTCTACTACTCCCATCATGCTTTGTAACACCGCTAGCTCACAGT
CCCGGTGAAACTTTTTTTCTTAAGTGGGGATAAAAATCCCTATTGAATTC
TCAATGGTGATAGAAATTTCATCTTTCCAAAGTTAAAAAATTCAGTGGAG
ATGGTTTTGGAGTGCAATTTTGAGTGAAATTCCAGGGTAATTTACCACCG
GGAACCAAATTTTTGCCAAATTTTCCAGTTGGGAAGGGGTCCAGTGGGTC
TGTGACACAGGGGTGTTTTGTAATTTCAGAAACACGTAGATTTTGAATGA
TTTTAATATTTTTTTCTTTTTGGACCTACCTCCGGGTACCCCGGTGGAGG
TCCTTTAAATTAACCCATGTCCGTTCGTCCGTTCGTCCGTTCGTTCGTCT
GTTGCCAGCTTTTCTCGGGATTGGCTCATTAGTTTTTTCTGATTTTTTGC
ACAATGATGCAAAATGGCGTTGCCCAAAATGTGACGGAGCCCGATTTTCG
GGAAAAAATTTTTTCCGGCCGAAAATGCCGGAAATATCCCGGAAAAACTG
ATTTTTTGGCACTTTCTCGAGATTTTATCATTAGTTTTTTCTGATTTTTT
GCTCAAAGATGCGTATTAACAATGCCCAAAACATGGCTGAGTCCGATTTT
TGAGAAATGCCGGAAATCGCCGTTTTTCTGGATTTTCATTGGACTTTTTC
CTTATAATTGGTTGTTTTTTCATTCAAAAACATCATTAATAGCAATGCCC
ACCATCAAGCATGTTTCAATTTTCAATAAAATTGATTTTTGAAGCCGGAA
CTATTCAAAAATCGCCGGAACAACCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTTTAT
ATTTTTTTATGAAATTTTGCACACTGATGCAAAATGACAATACCTAAAAT
GTGATTGGGCCCGATTTTCGAAAAACATTTTTTCCGGCCGAAAATGCCGG
AAATATGCCGGAAAAATCGGTTTTTTTGACATTTTCTCGAATTTTCATCC
TTACTTTTCTCTGATTTTTTGCAGAATGATGCATATTCGCAATGCTCAAA
ACATGACCGAGTTCGATTTTTGAGAAAATGTTTTTTCCGGCCAAAAAAGC
CCGAAATTTTCGTTTTTGCAGATTTTCATTGGATTTTTTCGTTTCATGTC
TTTGTTTTTTTCAAACAAAAACATCATTTATAAGAATGTCCACGATTAAG
CATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTTTTTCAATTGTCTTATTACATCAAT
CTTCAGGTAGGTCCATTCAGCATGTAGCTTGTTGTTTCAGGAAATGACGT
CAATTTACGACAAGTGGACATAGTGGAGCCGAAAGACGCACCCAAAGAAT
TACAAAATACAGGTAGGCACCCGTAAATTGAAATCTTCCAAAGCAAAAAA
TGGGTTTTCCATGAAATTATATATTAGGAAGGTCGGAAGCATTTAAACTA
TGGAGTAGGGAAGAAAAAAAAAGCAAAAAGCAAAAAGCAAAAAAAGTAGA
CTTAGGCTGGAATACAAATCGAAGAACAGCAGATGTTAATTTCTGAGAGT
AATATTCGCCAACATAAAGACAAATAAATATCAAGATTTCTTGGTGAATA
TACGTGTAAAAGCAGATATTCAAAGAATCTATCTTAATTTTTCTAAAGGT
GGTCGAAATCGACGTGACGTCATGCGAGAGAGGTTTTATCTGTGGCACGA
TCGTATCATCCCGTATGAAATCAAAGATTTTCAATCGACAGGTAGGGGAG
TAATTTCTGTCTTACATTTTGAATGATTGGCCATGTTCCTAAATGATTTT
CTCATTCACTTCCGTTACCATTTTTTTATACACTTTCGTTTCCTTGTTAG
ACGTGAATGCTATCAAAAATGCTTTGAACGAAATTGAATCAAGAACTTGT
TTGAAGTTTGTGCCACGAACCACCCAAATTAATTGGATTCAATATTTCAG
AGGCACTGGGTAAGACATTTTTCATACTCTTTTTTCTATCTATCTATTCA
TTCAACATGCTGACATTTTGATTGATTTCCGCATTAGATGTTACTCCAAT
GTTGGCAAAGTGTTTTGGCAGGAAGGATTTCAACAAATTTCGCTCGGTTA
TGGCTGTATGACAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004271TCONS_00004271Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004271-proteinTCONS_00004271-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:234889..239302 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.5	1.22	0.85	0.33	0.87	1.12	22.07	24.32	16.69	12.66	21.69	15.49	28.47	25.57	24.74	31.44	16.07	22.15	13.95	17.04	40.28	40.17	3.83	4.84	11.57	6.55	1.44	2.19	11.08	22.23