XLOC_002378 (gene) - C. hemisphaerica

Overview
NameXLOC_002378
Unique NameXLOC_002378
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000041:376028..383437-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002378 ID=XLOC_002378|Name=XLOC_002378|organism=Clytia hemisphaerica|type=gene|length=7410bp|location=Sequence derived from alignment at sc0000041:376028..383437- (Clytia hemisphaerica)
CTTACTCTATTTGTTTGTTTATTTATTTTATAGTGACAAAAATATTTACC AAATAAAAAGAAGTTGCTGGTGATGTATTGATAGGTGAAACACTCACAAA ATGGAGGATACAGATTCATCAGGCGACCATCGAAGGAGTGGAATGCTTTT GGATGAAGATTTCAACGTTTACGAAGAGCAGAAAGAAACGGATGAAGAAC TCTCTAAAGCCGCACTGCAAGGTTCGTGCTTGGTCCTTCTTCTTCTGTCT ACAATCATGGACAAAGTATTTGATAAAAAAGGGATTTTCATGCAAAATNT GCAAGGTTCGTGCTTGGTCCTTTTTCTTCTGTCTATAATCATGGACAAAG TATTTGATAAAAAAGGGATTTTCATGCAAAATTTTAAACACCAAAATTTA TTTTTAAGTTCTCTAAGTTACCTCTGGAATGTTAAGTTTTGACTTTGAGT TTTAACAAAAGACTTACGACAAAATGATCCCTTGGGATCTCAGGATTCAA AAGCTCTAAATTTTCCAATAAGGCTGGGAATATAGCTTAGAAGCCACTGA ACCCTCCAAACTCGAAATATCCAATGAAATAAACTGGAAGTACTAAAATT GCAATTCTCGCTCGAAATCTTATCCTGAAAAACATTAAAATTCTCAACAT ATTTGACTTGTTTTGATAAACTAAAATTCAACTACTATATCAGAATCCGG CCATATACACAACTACCTTTTCCAAAAAGAAAAACATTGCTATCCCCTCG TTGTGCCAAATTCTAGTGCTAAATTTCTCGCTATCTTTTTCAAGATTAAG GAATGGCTTAAATGAAAAATGTGAGGGAAATCGCTATAAGCCCCTATTCT ATTCTGTAAAATTTTTAGTTCTCGCTGATATTTAAAAACATAACATATTG GTTTTATTTGAGCTTCGATTTTTAGTGTTTATCTAGCGAGACATAAGTCT CCCTTAGCCTTATCTGTTTTCCTTTTCGTAAAATATCAAACTTGTTCAAC TCTCTCCCTTGGCTACGATATTATTATCGTTCCACACATAGCTTAATAAC TTATTGACTCGCCTGACCTTGGTTTTGATTGCATTCCGTTTCATTTCATT TGTGTAGTTCTATATTACTGGCTTTGGATCCTTGACTTTTTAGACTTGAT TTTCTTTTTGGTTGTTTTGAAAAAATGATCGAGTATTTCATCGACGACTC CGATTCGGAATATTTTGGTAATTTATTTATGTTCTTGGGAGAACTGGAGA TATTGATAGTCGACCCTGAGCTGTGGAAGAAGGATTATTGTTCTTATGTT CTTCTCATACCTAGATCGAGTGATAGTGTTAATGATTTATGTTCTGCTTC AATTAGTTCAACGAGGATATTCAAGTGTTAAAGAACTTATTATCCCAAAA ATCAAACAGCAACCTTAACCAAAGGAGTTGTATGAATAAAAACGTAATAA AACCAAAAAGGATGAAAGTTAATCATATTAGACTGTGTTTATGGTATTTC ATAGTAGATTGGTTGATTTCGCTTGAATTTTGACTTAACTTTTATCCGTT TATTATTCCATAGAAATAGCAGCTGGTGACACCACCGGGAGCGCTCCAAC CTCACCGACCTCACAACCAGAAGAAAGCAAAGAGAAACCAGAACGGCCTC CTGTTCCTATCCGTGTCAGTAGTCGACAACCCGATCCAAACGTTCTTTCG GTGGAACAACTTGAAAAAGAATATGCTGACATCGCACGTTACAAAATATT CCAATTGGCCGGTATGTCGTTTTTTTCATGGTCCAATTCTTCTCAATTAA AGGTTTTATTTTTACATAAGTGTTCCCGTTTCATGTCAGACACATATTTC ATATATCAGGATATCATGTCTACCTTTTGTTATATTATGCTTATAAGCAA AAAAATGTTTTTCTTTCCTCTTTCTGGCCAATCTTGCTCCACATCCGTGT CAATCCGATGTAAAAAATCTTGTAAATTAAGATTAATGATAAAGCAAAGG TTATCACCCTTATTTAAGCTATAATGTTTTGTTTCCTATTCATCACACTT CTCAAGCTTTGCCCCCCTTCGTTTATATTACTGTCACTTACGGACTCATT TTATTGCTTATATCGTTTAAGACTCCATCATTAGCTATATCTATCGGCTG TTCGTTTAGGTGATGATTTAACGGGAAGGCCAGTGATTGCATTTAGTGCA TGTCGACTTCCTGTTCGTAACCTGATTGATCACCAAAAACTTTTCAAGTA AGTCGTCCACTTAAAGTACCTCTTCTTTCAAACACTTCTTCTCTTAAGCG GACCAACCACTTCAAATCATTATCAATTTCGATCCTGATGTCGTTTTTTT TCTAATTACAAAAGTTTTTCTCGATACAACACCATTCGTTTCTCTCAACA TTAGTATAACCTACCTCGGAGGTCCTTTGAATTTTAACCTTTGTTCGTCC GTTGGTTCGTCTGTTAAACAGCTTTTCTCGGGATTGACCATTTTTTGAAT AGTGATGCTAAATGACAGTTACCAAAAAGTAACTGACCCCGCGAAACTAT CAGTCAGGCCATCTGAAATTTTTTGGGGATTGTCGATTCTCCAAAAAATT TGATTTTAGTGTGCGCCCCCCCCCCTGTGTGCGCAGGGAAATGCGCAATG GTTTTCATAGTAATTATGATTGAAGACAGTGTGTCCATCTGAAAATTATT TTGGAGATCGTTAAGTCTCCAAAAGTTTTAATTTTAGTGTGCCTAGGGAA ATATTTTTCTAAATTTGTTTTTGCATGTCCAACGACTAGAATATTGATTA TTCTTTCTTTGTTTCTTCTTCTCCAGTTTTTTGAAGTTAATGTTGGACCA GTATGTGGAGAATGATTACACCATCGTTTACTTCCATTATGGATTGAACT CGCAAAACAAACCTTCCCTCAAATGGCTCCTCAATATCTATCGAGAACTG GAACGAAAGTAAGTTTTTCAATCATCATATAACGTTTTTACCCACTATAC TATTTATAGTGATTTTGAATGAAGAACTGGATCTTTACATTTGAAGAAGT ATTGTTTTAAAAACTCCGGTCGATCAACCCCAAATGAAATGAAAAACGTT TTGAAATATTTCTTTTCTTCTCTTTAGATATCGGAAGAATTTGAAAGCTC TTTATATCGTCCACCCGAGTAATTTCATCAAAATCATTTTCAATATGTTT TATCCTCTAATAAGGTAATTCTTCTTACTTCCAAATAGTTAAATTACACA AATCAATGAAAAACTTTTTTCGGATCTAGTCTTCTTTGCATGTCGAATCT TCAATGAAATTCTTAAAAGTAAGAAGTCTATAAATTTCATATAATTACAA AAAGACTTTCTCAAACTGCAGGGTAGGTTGCATTTTTCTTTTAGCACAAA GTTCGGACGGAAAATCAACAACATTAAGAAATTGGACGAATTGGCGCCTC ATATTCGATTGGACCAGTTAGATATTCCAAAAGAAGTGAGAGAGTGAGTA ATTCCTAAAATAAAACCGGGGTGTTTTATTTTGCGCATTACATATTTCTT TATTTCATAAAGTTATATTTCAAAAGTCATCATGTAAAATAGGTACATAA CTAAAAGTTTCATGCTAGATACGCAATCATCAGATGTATAAAACATTAAA AAATGTAAATATTTCTTTATTTCGCATCCTTTCAATTGACTTTACTCTTT CAAACATCTTTATTTCAGCCACGATGAGAAGATAACAGTTCGGATGAAAC CATCCAACAACTCTTCTATTTTTCACACCAAACTCGAAACACCAAAAACA CAAGTATTCGGCATTTCACTCAAAACGTAAGTTATCGTCAGAAGTTGAAT TCAAACTGTTCGTGCAAAGTAATGACTAGAGGAAGTGGATGACTATCGAA ATACTGAGCTCTTTAAGCGATTAAAAATTGGTTTGTTCAAGCTTTTTCTA TGGTTCTTAATAGACGATTTTGCTTTTTTTGATTTCAGGTTAAAAGAGCG AACAGGGGAAGATATTCCAGAAGTTGTGAGATCCACTGTTCAATTCATTG AGCAAAATGGTAACGCAAATCTCTTTTCATTTTTAATAAAATCTTTCAAA AGCCTGATATTTTTCTAGGTCCTTGGTAAAAACTGAAGTGTTTAGCTACA AAAAAAATTGATATAAAGTTATCATGCAGCACCTTACTGAGCTGTCTCGG AGAATACATATGGGAAGTATTAAGTTACTGGGTTGATTAATAATAGTTTA TAAATGTAGTCAGTATCAAAGAAATACAATGAAGGCCATGTGTTAATGAA GTTGCAAATGGCCTACGAATCTTTAAGTTCTCCATTATTCTCTTTTTCAG CTCTGGACGTGGAGGGAATATTCCGTCGGTCTCCTCACGCTAACTCCGTC AAAGACGTCTCCCAAAAATACAATCATGGTAAAATAATATTTTTAATGAT TTAGTGTAGTGGAATTAACTCTACGGTAGTACCTTNGATATATTTTCAAT GATGTTTAGTTCACTTTAATTATCGTATAGTACCGTTTTAAATTCATGAT TTTTGTCAGCTGTGTAATCTTTTCAAATGATTTTTAACTGTGACATCTTT AGTGCAATGGATTTCGGGTAAATCGCACTCAATATTCCCTTTCGTTGACT TATGACGAACGAAAATTCAAAATTCTTATCATCTACTGTTTCTCTTCAGG CGAACAGGTGACGTTTTCATCAGATGAAGTTCATTTACCGGCTGCCATTT TGAAGAAATTTTTACGGGAATTGCCAGATCCTTTGTTGACGTTTGAATTA TATGACCAAGTGATGGACGCGTGCTGTAAGTGGTTCTCTTCTATTTTATC GTGAACCTTGAATTGCTGAATTTGGACTTGAAAGATATCATTGAATACAG ATTTTTAAGAGATGAGATAGTGATTGGTGCCGAGTGCACGTGACCAAACT ATTTTAATCAATCATTCAATTATAATTCTTTGACCCCATACGTTATGGTC CAAAATTTGCGTTCTTTTTTTTAAATAGAAAAATTTTGCTATATGGCGAA CCCGAAAAATTTTTTTGTTTCCGGTCCACCGGCCGGGTGAAAATTTATTT CGTCGTCACCCGGCCGCATTTTTTTTCGTACATCATCGTTAGGGTTAGGG TTAGTTTGTTTGTTTGGAAAACTTTCGTGAATCAGTTTTTGAGGCGTGTG ATTTATCTCACGTGATATTTGATATTCTACTGTAAAATGCACGCCTAGAA ATCACTTGGAATGAAGGTTTTTTCCTGATCATTGTTATAGAAATGAAATT TCATTCATCTCAAACTAAACCCTGCATTGTTTTTGTTAATTCTGGCTTGT AACTCAACTTTTAAGAATGTTTTTTTTATATAAATGTTTTTTTTATATAC AACTTGGTTTTTATAAAAGAATCATGCTGATTTGTGAGTAAAATAAATAG AAACATTCACAAAGTGGGGACTTTGCAGTAAGTAAACAGCTTTCTTTTTA TAAAAGGAATCATGCTGACTTGTGAGTAAAATAAAAAGAAACATTCATAA AGTGAGGATTTAAAAAATTGGGGAAATGTTTCTCTCACTCTACTTTTTTT ACTTTTTTTGTCAAAAAAGCTCACTTCGTAATGTAACAGTTTGGAGCCTT TAGCAATTGAAGATAAATATTCAAAATGAAAGAGTGTCCAGTTCTTAGAG ATATTGTAACACAATTGAAAATATAAACGATGAAAATTAAGCATTTGAAT AATCGCACGCCTAGACCACTATAAATCAAAATCTAGGCGTGCGATGATCA CACGTGAATTTTTCTTATGCCGAAGCCTGTAGCGATGTCGAGTTACTACA GATTTAAGGTAAAGAAGACCATCATTTTAACTTCTACGAGTGCTTTAAAA AATCGAGTTTTGGGATCGAAATTTAGCAAAAANTGCGGCCGGCCGGGTGA GTGTTTTTTTCGTCACCCGGTGGACCGGAAACAAAAATATTTTTAGGGTT CGCCTATGGATCATTTGTCAGTATTTTTGTTCTTCATCTTAGCTTTACCC GAGGAAGAGAGGTTGAGCTTCACACAAGACATGATGAAAAATTCAATGGC TGAAGAAAATCGTATTATTTTGTCATATCTCATGCACTTTCTACAGAAGG TATTAACCACTCATTATGCTACTCAACTAGGGATGAAAGCAACATTGATA TTTGGGGAAGATTTTGTGCTTGATTTGGAATTTCTTTGGGATTCTTTATA TTTCACGATACGTTATGTGGGTAATAGCTTAAAAGAGTCTGGACTGAAGG GGACTGAAATTCTAAGCACTACAAAGGGTGAAAGAACCAAGATGATTATA GTAGAAGCCAACCCTCAGGACTTGTTGTAGTATACTTTTTTGTTCAGAAT TTCATGTGCCATCCGATGATAACAATCATTTTCGTTTGATTCAACTTTGA AAAATTGTTCACTTATTTTAAGGTTTTGGAGTTTTGCCTACGACGTCAGT TTTTTGGCCATATAAACTTTTGCCAGGCCTAATGTGGGTCCCCTCTCAAA AAAAGTTTCAAAATCCTATCTACTTTCGAACCGATCACATAGGGTTGAGT CCCACGAAAGATGCTACGGACCCTAAGGGTTGGTCCCCTGCTATTACTTA AAATAATTTTCTCACTTCGATATTTTCAGGTTGTGGACCACTCATCAGCC AATCGAATGACGTCTGGTAGTTTAGCAATTGTTTTTGGCCCCAATATTTT GTGGTCTCGTTCGGAGGCCTCTACTTTGACGTCGATGTCAAAAGTGAACT CTTTCTGCAAATATCTAATTGACAATACGCATCTGATATTTGATGAATCG GTCGCTTGATAAAAATTGTCGCATAAAGACGAGTTTAGTTCATTTCATTC TGGACTACCTCATTGAACCGGGGACTAGTGAGTGGTGAGTCAATTGCCTA TATCGCGATCACTGGAACACTAGACTACTTGTCTCCACTGTGTACTTTAC GTATGCATACTCGGCCGCTGGATATGGAGTTATAATGGGATAGAACTGAT GATGTAGTCAGGTTACAGTTGATGAATGAAATCAAATTTTATTACATTAA ATTATATAATTAGCTAATTACTAGTTTATTTTGAAATTTCCATTGAAAGC TTACATTGGGAACAAGTGAAAATCCAAAGTACTTTCACATTCGAATTCAA GTAAAATCATACTATTTCCAAACATAATTTCACTTTGATTTTTACAATCT TGAATGCTTTAGTTACCTGTTTATCACGAATAATAATTATTTATATTTTT ATAGATCGAAATCTTTGCAGTGCATGACGAGCATGCGCAACGGTTGTAAA TACTACGAATTTCTTTTTTTTCTTCTCATACATAGAAAATATAAATCGTG ACCATTTGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004282TCONS_00004282Clytia hemisphaericatranscript
TCONS_00004281TCONS_00004281Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004282-proteinTCONS_00004282-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:376028..383437 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PRR5-ARHGAP8PRR5-ARHGAP8 fusion protein Homo Sapiens
ARHGAP1rho GTPase-activating protein 1 Homo Sapiens
ARHGAP8rho GTPase-activating protein 8 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
57.86 53.31 27.47 21.5 53.46 42.94 54.18 57.83 46.43 49.42 39.12 34.54 35.32 34.38 28.84 30.7 42.07 40.93 34.07 40.52 32.7 32.47 46.6 43.86 31.17 34.18 22.24 17.62 35.04 31.35