XLOC_002380 (gene) - C. hemisphaerica

Overview
NameXLOC_002380
Unique NameXLOC_002380
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000041:400615..405253-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002380 ID=XLOC_002380|Name=XLOC_002380|organism=Clytia hemisphaerica|type=gene|length=4639bp|location=Sequence derived from alignment at sc0000041:400615..405253- (Clytia hemisphaerica)
ATAAATAATTTGATAATTTGTTGTAATATCTTAATTACAGGTTTGATAAA GGAATGAACGAATTAATTTGATGGAAATTGGATATTTTTAGTATAATTTT TCAGCGAATAACAAGTTATATTGGATAAACTGAATAAAAAATCGAAAAAA AACATTCCATTTAGAAATCTGAATAAATTCACAAGAGACATTCATAAAAT TGCAAGTGGTTGAATATTACAAATCGGAATTAAAGACTCGTGGGTATGTG ATAATGAAAAGGGCATTCAGCGAACAGAAAGGTGAAAACTTCTCAACCGA CAAAAATCACAGATCTTTTTATCACGTAACTCGAGAGAAGAGGAGGGAAA AGAGCAATGTTGACTTTTATCGCCATATAAAGTCGATATGAGGTAGTGAT AAGTTGAAAGAATCTTTCTGGTGGTTTTGACTGATGACGTTCAGGTTGTT TGTTTTGATGAAGTTTTATAAAGGTAAACAAACCAAAGAGGAAGAGAGTC GCTTTGGAAACTTTATTTGAATCTCATTTTTAAAAAATACATCTCTCGTT CATTACGAGTGAGACGAAGAGGCACTTGTGTCTTGATTTCTCGGGTATGT ATTAATGAAGTGAAAGCCCGAAGGGTAGAAGCGAATCTTTAACTTTTCTC AGAAAAGAAAAAGTGAAGCCTTAAGATATACGCCGTTTTTTTTTGATGAC GTATTGAATTTAGTGGTTTCTTTGTTTTCGAGTTATATATTTTTTGAAAT CAAGCGGCAAATTTTAATTTCAATCTGGTGATTGTATTAAAACCACGCGG ACCGCTCAAGGCCACGCAACTTAGGTAGGATTTAGTGGTATCAAATCCTT CTTAAGAGATTCGCTTCTAGCCCTTTGGGCTTTTACTTCATTGGTGTGTG TCTCATCACTTATAAATTTATTATAACATGGTGTAAATTTCTATTTAAAT ATTATAGAGTTGAAAATTATCAAATTTTATAAATTCGCTTAAAAGACTCC AGTCAACATGACGTTCAAAGATGGAGAAGCAACATTCAAAGGACTCGTTA TTTTCATCATATTGGAAGGATTCACCATCGTGTTTTTAAACACCACAGCC ATCTTCACGATGGTCTACAAGTTACGAAGAAACTCAAAGACATCGAGAAG AGGGCGGAAGATGACGCCCGATAAACAAATCATTATCAGTTTATGTTTAA CAAATTTCACGTCAGGGGCGGCTGTGATAGTGGAGTTCGCTTGTTTTGCT GCAGGTGAACCAATCTCTTCCAAGAAGATCTTAGTCCTGGCGTTTATCAT CTTATTCAGTTTGATTGCTTCGTTACTTCACGTTATTCTATTATCATTGG AACGCTTCATGGCTCTCAAATTTCCCTTCCGACATCGTGAAGTCAAAAAG AGATCAACTGTTCTAGCATTGGTGTTTGTGTGGGTTATCAGTGCATTGCC AACGTTAACCATATTCATCAACAGATCTGGAGCATTGGAAATCATCTCCA TCATAATGATCATTACTGACTTCTTCCTCATCCTATCCAGCATCTACATC ATCAGTGTTACCAAGAAAGTGTTGAGTGGACAAAACGCTGGTATGATTGG TGGTTCAAAAACTGAATCACGTGATTATGAGAAAGAGATCNAGGGTAGAA GCGAATCTTTAACTTTTCTCAGAAAAGAAAAAGTGAAGCCTTAAGATATA CGCCGTTTTTTTTTGATGACGTATTGAATTTAGTGGTTTCTTTGTTTTCG AGTTATATATTTTTTGAAATCAAGCGGCAAATTTTAATTTCAATCTGGTG ATTGTATTAAAACCACGCGGACCGCTCAAGGCCACGCAACTTAGGTAGGA TTTAGTGGTATCAAATCCTTCTTAAGAGATTCGCTTCTAGCCCTTTGGGC TTTTACTTCATTGGTGTGTGTCTCATCACTTATAAATTTATTATAACATG GTGTAAATTTCTATTTAAATATTATAGAGTTGAAAATTATCAAATTTTAT AAATTCGCTTAAAACACTCCAGTCAACATGACGTTCAAAGATGGAGAAGC AACATTCAAAGGACTCGTTATTTTCATCATATTGGAAGGATTCACCATCG TGTTTTTAAACACCACAGCCATCTTCACGATGGTCTACAAGTTACGAAGA AACTCAAAGACATCGAGAAGAGGGCGGAAGATGACGCCCGATAAACAAAT CATTATCAGTTTATGTTTAACAAATTTCACGTCAGGGGCGGCTGTGATAG TGGAGTTCGCTTGTTTTGCTGCAGGTGAACCAATCTCTTCCAAGAAGATC TTAGTCCTGGCGTTTATCATCTTATTCAGTTTGATTGCTTCGTTACTTCA CGTTATTCTATTATCATTGGAACGCTTCATGGCTCTCAAATTTCCCTTCC GACATCGTGAAGTCAAAAAGAGATCAACTGTTCTAGCATTGGTGTTTGTG TGGGTTATCAGTGCATTGCCAACGTTAACCATATTCATCAACAGATCTGG AGCATTGGAAATCATCTCCATCATAATGATCATTACTGACTTCTTCCTCA TCCTATCCAGCATCTACATCATCAGTGTTACCAAAAAAGTGTTGAGTGGA CAAAACGCTGGTATGATTGGTGGTTCAAAAACTGAATCACGTGATTATGA GAAAGAGATTACACGCTTCTGGTCTACCATTATGGTTGCTTATATCTTAT TCACCATACCCCCTGTTTTGATCATGATCTTCAAAGGTGGAGAAGCTGTT TCATTGTACAGTGGAGCACGTGTAGATGGAGTTTTAATGATTCTCATTCT ACTAAAAGCAATTGCTGACCCTTTGTTGTATATTTTGGCTAATCAAATGA ATTGTTGTAAACACTCGAAAGATTCGAAATCTTTAGAAGCCTCAAATTCG GTACAAAAGACTTATGATACAAATGCAACTTCTGCTTATGATTCAAAACT GTGAGAAATTGCAAAGTTCTTTTTGCTAGTGGGAGTAATAGTTTTTTTGA AAACATGTAGTGTAAATAAATTAAAACAATATCAAAACAATAAAAAATAC CTGGGTATTAAGCAAAGATAGCTATTGAGTCAGTTTGTTACCTTTCCAAC GTCTCTCTAGGGTTACAAAAGTAGCATAGTGTCAAAATAATCTCTCTAAG GGTCAGCTTTAGGAAAGCACGTATCTGAGGGCATAGACGTAGCGAGATAC CCTGCAAAATTTATGGGTGAGAGCGGTTTTTACGACATGTAATTATTGTC TTTGTTTTATCAAAAGATAGTGAATATATCATAAACGTCTGCACTCCCTC ATAAATTTTGCAGTGTATCTCGCTACGCCTATGGAGGGGGTACTTTTTGT CTCTCTAACGATCACATTTTGCTGAAATTTNCTGTTTTGATCATGATCTT CAAAGGTGGAGAAGCTGTTTCATTGTACAGTGGAGCACGTGTAGATGGAG TTTTAATGATTCTCATTCTACTAAAAGCAATTGCTGACCCTTTGTTGTAT ATTTTGGCTAATCAAATGAATTGTTGTAAACACTCGAAAGATTCGAAATC TTTAGAAGCCTCAAATTCGGTACAAAAGACTTATGATACAAATGCAACTT CTGCTTATGATTCAAAACTGTGAGAAATTGCAAAGTTCTTTTTGCTAGTG GGAGTAATAGTTTTTTTGAAAACATGTAGTGTAAATAAATTAAAACAATA TCAAAACAATAAAAAATACCTGGGTATTAAGCAAAGATAGCTATTGAGTC AGTTTGTTACCTTTCCAACGTCTCTCTAGGGTTACAAAAGTAGCATAGTG TCAAAATAATCTCTCTAAGGGTCAGCTTTAGGAAAGCACGTATCTGAGGG CATAGACGTAGCGAGATACCCTGCAAAATTTATGGGTGAGAGCGGTTTTT ACGACATGTAATTATTGTCTTTGTTTTATCAAAAGATAGTGAATATATCA TAAACGTCTGCACTCCCTCATAAATTTTGCAGTGTATCTCGCTACGCCTA TGGAGGGGGTACTTTTTGTCTCTCTAACGATCACATTTTGCTGAAATTTA ACCCCAGGTACAATAATCAATATTATAAAAAGCTTTAAAAAACTTTATCA TTAATAAAAATGACCATTCTGAAGTGAATTTGCGAACATTGACAAGTTGA GGTGTCCCATTCACCTTTCACTACCTTTTGGGATAAACTGTTGTACAGTG TCTTCACCTGTTCCACATAATAAACAGTTCATCGAATATTCTTGCTCTTC ATCAATCACCGAGAAAGTATACTCATGTTCAGCAATGACATGCGCACAAC TGTCACACGTGTGAATGTAGGTTATATTTTCTTCTTCATCATCTTCTTTC AATTGTTTATTCGAAATCTTGATCAATTCTCGCTTCCCACACTCTTTGCA ACCTATCAAAAAGCAAATTCTTAATATACCTTCAGGGGAAGAAATTTTGG CGGGAATTTACTTTGGCGGATGGCGGGAAAAATTAAAATTTAGTGGGAAA TTCTAAATTCTATCTGACCTCATTAAAAAGTTTATATAGTGTTTTAGACA TTTATCGCTACTTTAATAGGTAAAGTCCATTCACTTTTTAATGGACGTAT TGAAAAAAAAAAATTTTCACCGCTTTAAAATATATTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004289TCONS_00004289Clytia hemisphaericatranscript
TCONS_00004288TCONS_00004288Clytia hemisphaericatranscript
TCONS_00004287TCONS_00004287Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Seven transmembrane proteinTCONS_00004287-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:400615..405253 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.67 0.48 0.28 0.58 5.63 3.11 4.99 4.88 4.14 3.45 2.35 3.06 1.97 1.7 1.39 1.37 0.43 0.41 1.01 1.42 1.82 2.1 1.31 1.45 1.25 1.34 0.97 0.72 2.03 1.8