XLOC_002472 (gene) - C. hemisphaerica

Overview
NameXLOC_002472
Unique NameXLOC_002472
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000044:613370..623564-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002472 ID=XLOC_002472|Name=XLOC_002472|organism=Clytia hemisphaerica|type=gene|length=10195bp|location=Sequence derived from alignment at sc0000044:613370..623564- (Clytia hemisphaerica)
CTCCAAAGTCATAGCTTGGAATACAAAAACATCGCGTGAACAGAAATTTA GCGTCTTTAGCGCTCCAAAGTCATAGCTTGGAATACAACAACAAAAAGCA ACGAAGCAACTTGGGACCAGTTGGTTTCAGAAAGTAGAAAGTATATAATC CCATATACTGTTCTGCAACTTTGATAGTAAGTATTAAAGAATTTCTTTTT GCTTTGTATCCTTGTTTGTTGTATAATCAGGCATCAGTTACTTTACTGTT ACTTTTGGGTACTTATTATCAGAAATTGGAAAAAACTTTGCATACTACCA TTAACGAACTTTCTGTTTATCTCCAGGCAATGTCAATTGAATTCAATTGA TCCAAATTTTTGTAATTGAACTATCAAATTTTATCAAACAGAATCAAACT ATAGGTGTTTGGTTACTGAACCTGATCGAAGACAACCCTGTCTAACGAAA GAAATATTTCTATCCCCAGACAAACAAATTGCGCTGCCAGATAAGTGAAC CACGCGGCTGGATAAGTGAACGTGTTGTCACGAGTTAACGCGCGGTCGAC TAAGTTCGCATGAAAGCAGGCAGAATAGGGATGGCCATCCATATGGTGAA ATTGACGCCCATGTGTGATCGCCCAATTGTTTAAGTACGTCTTGCAGACC ACGCGTTCAGTCCGGGGTAAGTCTCATAAAGTAATATTAAATCCTCGGAC ATGCAACAAGAAAATCCCTGGAGTCCTGGGAATCGGCAGGGTCGTTCGAA CATTCAACTTTACCAGAATCTTTTAGTTTCGTGACTGTTCGATTTGGTTG CGCGGTAATCTAACACCTATCGTTCAGTGTAGCTCTAAAGCTCTAAAAAC AGCATCTAATAACATGAAAACCAGAATATGATTCTTCAATGGGAATCAAA ACTATAAAGTGCACTTACAAACATCAATTTGTCAGATCTAACAAAATTTA TAACGGCACTGCCAACATTGACAATAAAACAAACAATATTCTGTCAAGAG CCTTGTAAACATTCCAACAACTTCCATCGAAATGATCTATCACAGCTCAG TCTACCATTTTAGCGCGGTCCGAGGATTGAGCCGAGAACTCTTGCAGAGC GCCCGAGCTCCCGCGCGACGCGCACCGCGGGGATGAAAAACTTCAATCTG TCAATCATTTTCTCAAGCGAAAAGTACGCGAAGCGATTCTAGCTTTACGA TAGTGCCGCAGATCATCAATGGATAGTATTCAATTAGCATTATCCCTTTA TTTTCATTCCTAGAACTTTTGCAAAAAAAAGGAAAAATAGAAAAGTTGCA TTTTTTACTGCTCTATTCACATACTGAATTTGAAAGATCTTCTATGTGGC GTTTTTTTGCAAACTTAAAAAAACTGATTTTTGTCCCGCCTTTGCGGGAT TTTGGCCCAAGTGCTTCAGTGCAGCATAGGGTACAAAGTCCAAATATGCG TTTCCCGTAATTTTTGTATGAAGAGTTAGGTCTACACTGTCGTTTGATAA TGTTAGATTAGATTGGTACCTGTGGAAAAGGGTAATTTGCATCATTTGAG GGAAACTTTACATTGCCTCCAAACTGCAGACCTTTCTTGGTTTGCGCTTT GTCTAAGCTAAAATGTAAATGAAATGTTTTACAATTTTAGTACCAGAAAG CTCTACTATTTGGAGGCAATACCAGTTTCGCTCCAGTGATTACCCTTTTT CACGGTAATCAAACAGTCTGATTGACANNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNGCCTTCGTTCATTCACCATGACAAATACCATATTAACCATTAAAGTAG TTTTACACGTTGGATGTACCGTCAACTGCTTTAAAGCCAGATTGACATTA TATATTTTTACGAGATCTGAATCGCTGCTTCAAATACGCTGAGTTTGCAC AAAGATAGCAGTTGTTCAACCAATCATCAAACTTCATTTTAATATAATAT TTTATTGACAAGAGAGTTTTGACTTCAAAATGTTGAACAAGAATTGGAAT GAATTGTCTGCGTTTTTAATGGAGCTGTGCAATGTTTGTGCAATGGGACA CCAAAACAGCAACCATTTTCACCGAACATCCACAGAATTNNNNTATCTCA AGTAATCCCATTTTAGAGCAGTTGACGGTACACAAACTTGACATTAACAC TCCTTTTGTTGGAGAAATTCCTGAAGGATATTTCATGTTATGTACCTGTT GTTTGGTTGAATCATTTTGGTTTTGGAATGCTTCTGTACCCACTGTATTC TTTACAAAACAATATTACATTACGATATAGACAACAACTTAGCTGAAAAT TATATCATTGTCAAAATATAGTCTTGGAAATTATAAATTCATGTTTTGAT TTATGTTTGTTATTTTTATTTTTGTTATTGTTGTTTCAAAGAAAATGCTT TTGAGAAGAAGGTGCTCTAAATATTTCCTGAAGATTATTCCAAGACCCTG CCTATAAAACTACGATGGCCCAGGAGGCTCAAAACACGCACTTCTAGTTT TCACGCACTTCCAGTTCTTATAAAATTTGTGAACTAGAATTGTCTAGGGT CAATGGCCCAGAAGGCTCAAGTGACACTGCGCAATTCTGACTTTTTGTCA CAGCGGGAAATTTCCAAGTGAACGGCCCGCGCAATGAAATTTTTTTTGGT CTTTAAAATTAATGTCGAGTTGCGCAAAACGAGTTAATATTTTCGAGTTG TTCATATCAAGAGTTACAGGTTTAAATTTCCGAGATAAGTGCTAGTCAGC AAAATTTCCCTTCAGCGGCAAAAATCGGGGAATTTCTCGGGCTTAAATCG GGGAAGAAAAAAGTGACCAAATATTAACTTTGTGAAAACTAGAACGTAGA AGTGCGTGTTTTCGAGCCTTCTGCTGGGAACGCCAAAATAACTCGAGTCG AGAATCTACAGGAAGGAAAATAACTCAAAAATTTAAAAGAACGAAAATAA ACCGAGTTAAAAAACGAGAAATAGCTCGAAAATTCAAAGGGAGGAAAAAT ACTCGAGTTAAAATACCAGAAATAACTCGAAATTTCAAAGTCAAGGAAAT AAAAACGAGTTACGAAATTGAGAATGACTTCATGAGGTACATACAAAATG ACGTCAATATTTATTTCCGAAAATAACGCCATAACTCGTTTTTTTCGTAA CTCGGTTCTTTAACTTGGGATTTCCGAGCCTCTTCGCTATATTATCATCA ACTCATTTATTAAAACTCGGTATCTATTTTGCTGACCATAACGGCTATCT TTCGAGAGGGACTTTTGCGTCTCTAAAATATTTTTAGAAGAACGCAGTGT CGTCACTGTCGTCACAAAAAAAGTCGGAAGTGCGCAGTGTCTCGTGAGCC TTCTGGGCCATGACCCTAGACAGTTCTAGTTCACAAATTTTATAAGAACT AGAAGTGCGTGGTGAGCCTTAGGGGCCATCGTATAAAACATGAAAAGCTT TGTAATTCAAGCCTTATAAGGTATCTATTAAAGGGGGCATGTTTAGTGCA AGCTATGGCTGAGAATAATTGAATACTTTGCAATATCACTGTATTTCTGA CAAAAATAAACACGGCATTTCGCCTTTTCTGAATTTCAATCAATCACTGT CAAATGCCTGTCATCGGGAGCATCATAGCGAAAGCTACTTGCTAGTAGTA CTTTATACAGGATTCGAAAATAATATAAACAAAATCTCAAGAATAGATTT TCATTATTTTAATACATATATAAAACAAGGAAGAGAATCCGTTTAGTACA GCTCGTTTCTGATAAGGGAGAAGAGAAAAAAACTATTTCAAGGCTAGATA ATTTATTTCCTTCGTCAGCGACAAGCAAGAAAATAAAGAAAATTTCCAGA TCGAATCTACTTACAAAATTTTCAATGGATTTGGCAATAACATGAATTAG AGAAGGAAAAAACAATGATGAAAAAATCTAGATAAAATATTTTAAATGAC GTATAATCCAGATAAAATTTCATCCTAAATTTCGATATTGTCAAAATATC GGATTATCCATACTCAATAAAGGCTACAAACCTTTTACCGTTTCAGCCGG ATAGAAATAATTTTTAGAGAAATAAGTATGACGTCATCGCCCTGTCCCCC AACAAAAGAGAATCCCTTTTCCATTGTTAAGGAAATTACTATATTATGAG AGTGAAAAGGGTCCTGGTCCATAAGACAGTTGACAGACTACTTGTTCATT GTCTAGTGAGGTGTTCACAGTTTTGAATATTTCTGTGGACAATTTCTGGA AGATTAATGCAAGCCCATCTGGAAGGTACAGTTGACGCTCTCTAATTCGA TTTTCAAGAGGAATTAGATTTTCATCGAATAAGGGAACGTATCGAATAGT AGAGCGTCGTTTATGAGAGTTTCTCGTTTCTCGTTGACGGTGACTTTCAA TATTATCGAATAATTGGAACTTAATAATTAGAATTACGTGATTTATAAAT TCGTTTATTGACCTTATAAGAAGCTGTTTCTTGTTCATTTTGAAAACCAA AAATTTTGTCATGTGTCACTAAGAAAAAAGCCGTCCTAGGATGTTTCCAT TTATAAGAGACCAATTTTTTATCTTTTTGTTTTTATAATTCTATTTGGGA GATGAGAAGGTAAAAAATGAATCAGTGACCCAAATCCGTGGAAAATCCTT ACAGTTTTTATTTTAATTATCTTTTTGAGTTTCAAACTCGAACCCAGTCC TATAATTCGCTTTTTTATTTTTTTGATTGCGAATCGGAGAAAATAACGCA AGTGGCTCTGGGTACGAGATTGTTCGAATTGTGAAATCATACAATTTTGT TTTGTTTTCTCAAAACTTTTAATTATGTCTTTCTAATCCTTCGCAATAGT ATTTTGTTGCACCGGTAATCCTTACCGAAATAAAACCAATTTCGAATGAT GGTGGAATTAGTTTTAGTTGAACCACAATCAAGCCATTTTGATAGCCTGA TTTTGAGATAAAGACATCGTAATAAAAGTATTATCGAAAACTTTTGGATC CATGAAATAGTAAACTTTTAGTTAGGGACAATTGTTCCATTTTAAGATTA ACTTAAAAGTCGATTTTAAAAATATTAGTAATTTCAGAATAGAAAATATC AACCCCGGAAAAATGCGATTTATAGTCTTAATAAAAATCTTAAGTATTAC AGGAGATATTTTGCGCCAAAGATTCCGAAATGGTACTTGACGTGTCTCTA CTTGGTTGAGATAGGTCAAGGGTTACTGGATCCGTGCTGACTGCGGTTTT TTAGAGGTCTGCGATTCATAATAATTCAAGGGTAAAAGGAGACTTTGCGT CCTCCCATACCTTCAGCTAATAGCAAGGTGTTCATTCTAGGGTGTGTTTT TTACAAAAAATCTTCTTTTTTAAGTCAGAAAAGAAAAAGGAAGTAACTTC TTGGTTATTTTAAAAATATATTTCTTCTTATTTTCTCAGAATTCTTAAAG TATAAGATCCTCCAATTAATTTTAACGGTCTTACATTAGCGTGGGAAGAG AAAGTTCCGCTCCTAAAATAGCTGGTTGTTCTTCTTTCAACTTTTTTTTT TAAGTTTAGAAATTTCATTGAGTTTTTTTGCTTTCAATAAAACTTTTAAT ATAATGTACACACTTATTAATCTTTAGCGGTCTGGTCATCTTGTAGGGGA CTGGAATCGAGTTTACATGGGAGTTCTCCTCAAGCTTGTGAAGGTTGCAA AAGTTTGCTCTAAAAATTCTAAGCCTACCAATGTTTTTAAAATGCTCTTA TTTTCACTATTTTAATTTAGTGCGATTTTCCTAAGAAATTGGGTGTTTTA GGATATATGAAGTCTTATAATGTTCTAACTGCTTATGTTCTTATAAATAT TCAATATTCTATAAATATAGTTTTTATTCTCGTAAAAAACGTGTAAACTC TTTACCAGTTTTTTCACAAACCGATCACGAGATTAATAGTAATAACAAGG GCGGTAAAGTCGCAAAATACAATCTAGCATGGTTAAAATTGTGACCGATT AAACTTTTAGAGTAAGCAATATTCAATTTGTTATTTTAGAAAAGAAACAA AAACGCAAAAATCCACCATCCCAAAAACTACAACAACAAACCAAACTACA AAAATGATTCTCAGTAACAGTTCTCACCTCACTGGATATGTTATCATGGC ATTAGTATATATCACAACATTACACGGACTATCAGTAAATGATGTTAGGA ATCAACTAGCTAGGGAACTTAAACAATCAATCGATTATGATGAATATCAG ACGTTCAGAAAGAGACAGCTAGGAAGTAAGTACCCTTGCTATTTTCCATT TAAATGGTTATGATTCTGAAAATATCAGTTAAAGGTGAAAATTCACTAAA TTCTGATAAATGTATCCGACAGGATCGACTTTTTGTCGGGTGCATGTCAC TAGTCCGACACTTTCTAGTCCGACAGTAAAATATTCCGAATCTATAAAAT AAATTTAGAATTTGGGAGTCTTTTTTTCCGATGTCACTTTTGTCCGAAAA CGAAACATTTTAGAGTGTCGAATGTTGAATAGGGTTTTTCACTGAGATAA TATTAATGAAAGTTCATTTAAAGCGGAACTTCGGATTTTTATAAGCACGT GGTTGCTTATAAAAGATGTGCCTCCTTTTCGGCGATTCATATTTCGTTTC ATGTTTCATACATTCATGCATGTTTGTTTTTTGACTCGTTGTCGGACAAA ATTGTTGTCGGAATACTGACGCATTCGTCAAATCCAACATCGGACATTTT TACTGTCGGACTAGAAAGTGTCGGACTACTGACGACCTCCCTTTTTGTCA TTTCAAGAACTTTTTAAGCTGAATTTCGAAAAACATCAAATACTTTCTCT TCTAATATTCATCTGGCAGGGCCCAATATTTGCTATGAAAGTGATTTTTG ACTGACAAGTTCCACTTTTTGAACCTTTGAATCATTTTATAATTTTGGTA TTTTGTGTTTTGCTAAATTTAGTTCGAAACAACAACTTTTTAGGCTGAAT TTAGGAAAAAATATCAAATTTTACATCTGAAAGGGTTCAATATTTGCCAG AAACTGTTTTATGACAGGATCGAATTTTAAAAACTTTAAATTATTCGACT TTTCGGTATTTTGTGTTTTGAAAGAAAAACCTTGAACTAAAATGCACACT TTAGGACTCAACATATTTTCATTATTTATCATTCATAGATGGACTTGGTG AGAACCCTCTTGATAGACTAGCCACTGGTGTACCCAAGGATTTCGAATGT GAGCATATGACGGCACCTGCAAACAGTAAAATCAAATGTGGAGGTCGATT ATGTCTTGTTAAATGTGATGAAGGATATGTATCACACCCAAAGAATGCAT TTGTGTACAGATGTAAAGTTGAAACGAAAGAATGGATTACTTTACCAAAA GGTTTACCTCTTCCAATCCCAGGATGCATCAAAATATCTGACTTAGTACC GGTAAGTTTTCTATTAAGACCAATCTTGTACCCAGCCCACCTACGCCATT TTTTTATCTTAGAGACTGGGTTTGAATTAGTCTTATACCTAGAGCCACTT ACGCCACTTCTTTTGATGTTACTGATGTTCATGTTACGTTAGCTGAATCA TAAAAATCAAAAAACTTTAAGGGACTGGGTTTCCTTTTGTATCCAATCGG AATAGCTTGAACCCCCATAACTTAAACTACACTAAATACAGTTGACTCTT TTTAATTCCATCTTAAGTGGCAAAGAAATTTCTCCGAATGTGTAAGAAAT ATTTGAGTTACAGTAATTATTCTATACCACTCAACAACTGTAAGGAAACC AATATCTTAGTACTGGAAATTCTCTAAAACTCGAACTTTTGTCTGATTTC TCCCTTGGCGTTCGATTTATGGAGAGTCTGTCTAGCTTTAAAACTGATGG ATTTTATACTCTATTCTAGATCTATTAACGATTACCCACAGAAGGGAAAA CTTGGAAAATGGTACAAAGACGAAAGAAAAATCCATAACTTCCAAAAGAT CCAAACGACGTGATGAAAGAAGAAAGACCCTTGGTCCCCCAAAAATGACG CCCTTTTAAGATATTAAAATTTTATTATTTATTATATATACATTACAATA TACATTATAATGCAAATAACGACTATATATTTTATTTTATTTAATGGATA ATTATTTCATACTAAAATTGTGTAAAAATTACTTTTTATTAAGGTATAAT TTACACTGTCATACAATTTTTAGATTTTTTTCTTCTAAAATCTTTTTGAC TTTGGAACCTTTGCAAGTGTTTTGTACAGTGATGATATATTATCTCTGCT AGCGGAGAAAAATTAATGATGATGGTTAAAAAGAAATTATGCAATGCAAA AATAAAATCTACTATTGACTGTTAATGTTACAACCCTGTCTCACAGCCCC ATGGAATATTTCTATCGAAATCTAAATGTGGTTAGAAATTCTACTGTTCC TAGCTAACGAAATTCTGTAGGATGGTTTCGGTGTACAACATCTTCTTTTA CATTGGATTTCGAATAGGGATGAAATCGAAGTCATTTGTCAGTGGGACTG AACTTGTTGGGAGATATCTTTCCAACGGGGACGAAATTTTGGCCAAATTT TCAAGTGGGACGGGGGTCGTAGACAGAGCCACTTTTGGATTTTACTGATG GATGCTGGTGTCAATATTTGACGACTACCTTCACTTTCGTTTTCTAATTG TTTACTTTTGTCGGTTGCAGGACTCTTAGTCTGTAGTCTTGGCCTAGTCT TTTCTCGTGTTTTTCTTGTCTGCTTTCATAATGGGGCGCTAGTTACAAAG TTACAAATCAAACTTTAAGACGTTAATCTGAAAGAAGATTCTATCCAGTT CATTGTACATTTTACTGTCTCCATACTTCTTGTCCATCATGTTTCCCCAC AGCCATTTCCTCGAGCAAATCAACAGCTGGTTGGTTCGAGTTTGAGGGGT GTATTGCTGCACTCTCCAAGGGGTCCGAACTTCGCCTCTACATGCTTTTT CTTATAACAACGTACTCCATAAGGATATTCGTGAAAAAAAATCGGAAAGT AGTTTTGTACTTTTATCCATGATGTATAAGATAAACAGGTACCAAAATGC CGAGAGCCGAGGAGACCACTGTAACCAAGAACAACCAGAAAAACAAACGA TCCAGTACTCGAGCGAGTAGCCTCCAGTCTTCTTGCAGTTCACTTTTCTG ATGACTGCTTAACATTCCTTTTGTTATAATTTGAATTTCCTTTAAAATCA CATCAAGCGTCCCGCTAAAATTATTTGTCTGAAGGGTTGAATTTGGATTG CTTTTCTGAAGGTCATTGTATTCATCTGACATGTAGAAACCATTATCATA AGCGGAGGAGTGGTTTTTATTCGCATCCTCGCCTAACCTGGTTTCTGTCT GCATTGTCTCAAGTTCATCATAGTAACCATGGATACCGAAAAATTTTGCA CATGTACCAAGAAAGAAACTGCGTACCCACTTCGGCATAGGTGCTGCACC TCTTTCACTAGACCGGTAATGAATAACCAAGACAATACACGTAGTTATCA GGCTAAATGCACTTTCAGCCATAATCGCCATATAGAAGACGGCTAGCATT GGAACACTATTCGAGTTGCGAGGTAATGCGTCGGATATCAACTGGAGAAA CACGGCAACAGCAAGCAAAATAGTGATGGTCAAAGATATGCGTTCTCCAC TTTCAGGGGGTAGAAAAAAACCAAAAAATACAGTCATAACTAAAACCAAG CAAGGTGCTATAACGTTGAACACGAAATATAATGGTTTCCGTAATAACAC TAAATTGAATGTTATATCAACATAAGGCTCTGGGCAACACTGGTATTTGA CAACATGTCGGAGTTTCTCAGCTTTGATTAAATCCCATTCACTGGACGCA GAATACTGGTCAGTAATCAATGGACGATTATCCTTGAGTAAATTGATACC AGCAATATCGAAAGTCCAAGAACCAAATTTCAAATGACATTCTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004422TCONS_00004422Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:613370..623564 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.19 0.03 0.09 0.79 0.87 0.78 1.2 0.9 0.83 1.04 0.58 27.1 17.56 0.63 0.93 0.57 0.65 34.05 62.25 3.46 3.48 0.67 1.56 2.38 2.44 0.2 0 0.06 0.15