XLOC_002474 (gene) - C. hemisphaerica

Overview
NameXLOC_002474
Unique NameXLOC_002474
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000044:667064..676857-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002474 ID=XLOC_002474|Name=XLOC_002474|organism=Clytia hemisphaerica|type=gene|length=9794bp|location=Sequence derived from alignment at sc0000044:667064..676857- (Clytia hemisphaerica)
NNATCACATGAATTTGACCTTTGGTGGCTTTTTCCACGGCCCAGGTATGC TCTCAAGCAAATTTGTTATAAATTTCGAATTTATCTATACTAGTGATCTG AATTTTAAAGAACTACCCGTTGCAATGATATTGCAGATTATGCTCCTTGT GAGAGGAGTCTTTTGTTAATCATAATTTTAATTATGCAACAAACGTGCTT AAAAAGGTTCATTTTCGCACCAATTTTTCTCACCAATGATTATCTTGAGG AAAATGTCATACATAGCTGTTCTTTAACGAATTATCTACTAGGTTTCGCT GAGGAAATATTTCATACAAATGATGTGAAAGCACAAGAAATATATAAAGA TGATTTTGTCCACGTCAAAGTCGACTTACTGCAGCTCCATTTTAAACGAA AGAAGGTAATCCTTCAACTTTTCAAAGATATTCTTTTTATAATTTCAGCA CGTGACTGAATTGCGCATCCCTGTTCCTATCTTAGATGGTCGATCACGTG TCTTAAGTTAGACGACCACCTGTATTTTTGTTGTCTCTCCACAGGCTTAT CATATCTTAGGTCGTCTTCTATACTCTCAGGTACTTATTGAGTTTTGGCT TCTTCAGATATCCTTATCTGACCAGCTTCTTTGTTTACTAAATAGAGCAA AGGAAACATTTCGGGACTGAAAATTTTTGGAAAGCTTATTCCTGGAGGTC TTCTGACAAAAATTAAGATGTAGGAAATAGCTATTAAAAAACGCCTGGTT TGTCTTTTATATATACCTCTTCAATACCTCTTTTCTTCTTTTTTCAGGAC GTTGAACCCATAACAGTAGTGAACCTGGGAAATTGTAAAGCACCGTGGAA CCCACGGACACAATTCTTAACACCTGGAACATCAGGTACAGTTTACTCTC GCTAATTTGGGCGGGGAATTATTTGTTTGAATTACAATTTAAAAGAAGGT TCCTCCTTCGACGACTGGAAATCAGTTCGAATTATACAGATTCGAATAAT AGAAGCATCCAGACTGTAAACAGTCTAGTTTTTGATATTTTATGTTCTGG TTTATAGCCTGGTCTCTCTAGAGCGTTTTGCCTTCTCGTATGAATGCAGT CCGCTTACTTGCGCTCACTTCGCTAAAGCCGTAAGAACCAATCTACATGA CGTGAAGTAATTCTGTAACAAGAATAGGGTAACCTTCTACTTGCTTATAA GACTGCTTTTTATTAATTTCTGTTTTGCTGCCCTGGGTTGACTAGGAATG TTTTGGAAACATGGGTTTGCACTTTCATTCTCTAGGGAGATCAAGCTCTA TAATTTTAGAACTTTGTATGTTGAGATAATTTTTGTTTTTTCTAAAAATT TGAGCTTGGATATCCAGGCTAGAACCACGCTGGAATTTCAGAATTACATT ACCTTATTAATTTTTTACCATTTTAAAACATTTCTTTTTAGTTCAAATCA CAGTACCTCCGGACGTCTTCAATGAGAACAACAAAGCTTACAAAACACAA ATACTCTCCATATCTGTCTCACTAAACGTTCCCAAAAAGAAAAAGAAAAA GCCTGGTCGCAAGAAGAAAGAGGCTGGTAAGTACTGACTAATGTCGCCCC CAGTCACCTTTCAAATTACGCAATCACGCAAAAAAAAATTCCAAATCACG TTATCACGAGTTAAATTTCCTTTCTATCACGATCACGTTTATCACGATGG TTCCTTCGATCACGCAATCACGCACTTTAAAATCTTAAATCACGAAATCA TGAACTTTAAAATCTTAGATCACGAAATCACAAACTTGAAAAACACCAAT CACGCCATCACGAAAACCGGGGGCCTCATATCTGTTAACTGTTGGCTTAC ACCCCCTTACTTAACAAATAACACACTGGTGGCCGACTACGAGTTAGCCT GGGAATCCATGCTATGATTTCTTCTTTGATAAACTGATGGCGAAATGTAT AGCACAGTACGGGCTGAGAGTTTGAATTTCCCAGATCCTAACAACGGTTG AAAACTTAGCCAATCAAATTTTGTTATTCTTTTACTGGTCACACTTTCTT AGAGAAAGTGCAACTTTCGAAATTTGGTTTTTATTTTAGTAAGTGAGGAC AGCGCTAAATTCGAATTTCCCTCTGTAAAAAATGTGAGTCCAATATTGGA CTCACAGCTCGAACCCGTCTTGTGTACATCAAATTATAAAAAAACACGAC GGGTCTCCTGTCTAACTACGAGTACACTTCAAAGGGACATAATCTCTTGA TATAGAAATTGTTCTTGTTTTTATTGCATTTTTTTAATCTACGTGGAATT TTGGGTCGATTGGTGTACAATTTGAAGACATTTAAATCAAAAGGAGTCTC TTAAAATCAAACGTTCGATGAAATTTCCTAGCAAGAGGTCAAATTTTGAT TCCTAAAAAGTGCTCGGCAGTAAGCGTTGTTAATCACACCGTATACAAGT GCATTTGTTTCATTTTTCTTTCTCTTGTACTCTAGCAACAGAGGAGCCAC CCGCAAAGAGGTTGCGTGGTAGTGTTACTTCAGAATCTCAAGTCGAAGAG GATACCAACACCACCACAATCAACGGCTTCGAGCATGCCGACGAAAAACC AGTCTTTGACAGCAACGAAGCTGCTTACTCAGCAGAATTGATCGTCTTCG ATCGATACAAAACATGTTTGCTTTCTGATGGTGACTACGAGCTCTTACTT CATAACGAGGCTGAAAATAATGAGAGCAGGAAGAATAACACTTTTGAAAG TAAATTCAAAAATAAGGTAAGTGTTACAAAAAATAGAAGATACGAATTTT AACCACATGATGGGTGAAATTACAGTATGCAAAGTTCTTCTGTGTCAGAC AGATTTTCGTTTCATTGAGGTACTTTTCCGTCTCCAAATTCAACAAAATT CTGCAAAATTTAACGAATCCTGCCTGGGACAAAAAAACACTGAAATTAAC TTTCTCAAAACGTAGGTAAACGAACATGAAATACGGTCCTACATGCCACT TTATAAGTTGTCAATATTCACTTATTTTGGTTGGTAATAAGTAATAGTTC GCACGGTACAGAGTACACTATGGGATATATTTTTCGTCATATTTTCCGAG CCTACGCGTTTTTAGCCAATCAGATTGGTCATATTTTTCATGTCATATGT TATGTCATGCATACTCCTTTCTTTGAGGAAAACTTTCAATCATCCTTCTT GGTCTTCACCTAACGTAACCTGTGTCATTAGCATTGATTTTTCTTTTTAT TCTTTTTTTACTTTTAGTTGGGACCATTCGCTGCATTTTCATTCGGCCCT ACCATCAAATTTAATTTGAACTGGACCACGTCAGCGCCCATCAACATATT ACCTGCTTACAAAACACTAAACCAACGCTACTTAGAGGAACATCAAGCGC ACGAGTCACAAGACGAAGCGGTCGAACCTAAAAGCATGACCGCAGCGAAT AAAACAACAAAACCGAAAGAATCTTCCTTACCTAAAGTCTACTACCAATT TCTGTATTGTCACAGTACGCGACAACAAACGGAAGCGCGCGAAGGAACGT CTTGTCCGTGGTGTGATTTGCAATGTTGGACCATTTACGGATTGTTGAGG CACCTGAAATCTTTTCATAATCGATTTTCCTTCGTTTATACTGTAAGTGT TTCTGTTTTCCCTGACGGCTTTAAAAAGTTCTAGTCTACTACTACAAATT CGTCTACCCTTTTTAATCCTAGCCCCGAGTATTGGAGTCTTTCTGGCATC GAACTGGTGCCTCCCCAGTTTTAAAAAATCTTAAAAAAAGAATCGAAACG TTCTCTAATTGTAATACATAGAGTCTACATAATTTGGAGACGCACAAATT TTGTTCAAGTTAAGGAAATTTCGAGTTATGGAGTGAGGTTTTTAAGGCAT TGCTAACTGAAGGGACCATAAAAGCTATAGAGGTTCGAGTTAAAAAAACT CCACAGTAACACTCTTTTGAAGAGTGATCGAATTTTTGAGATTCTGTTAT ATCTTACAGTTCTTTCCACACTTTTTTCTACAAACGACAGGCACTGAAGA GAAGCCATCGTATTGACGTCAGTGTGAACGAGACTTTCGAAAATAGTCTA GGGTTTGATGGAGTTAGAGACATAGGATTTATTGATATCGATAACGCACC GATTAAGCGAAAACCTACATCTGAAATCCTCGTCGGAAGGTATATTAGTT TCTCTATTTTTCCAAACTGCGTATAGACAGTGTGTGAAATTTCCGAAAGA ATCTAAGCTATCTGTTCTTGGAGAACTTCTATGTGTGTCCTCAGGTTTCC TGTTTTTCTTAAATCTTTTCCTTATTTTTTTCTTAACTTTCTTACTTCGC TAACATAACTAAACCTCGAAACCTTAATGTCTTGGTATTAGACAATCTTG CAATGTTAATCTTATTGTGTGATCATGGCAACGGTTAAATTGTAAATTTT CTAAGGTATTGAGGTTTGAACAGCTAGCCAAAATTTCTGTGTCCATTGCA CGCTTTTTGAACGTTCGATTTGAAAAAACAATTGTGTCAATCTTTCTTGT TTGCGCTCATAAAACAGGAAACTATCAACACGAGTGTTCTTTTTAAAAGT AACGATTTTCCAAANATTGTGTCAATCTTTCTTGTTTGCGCTCATAAAAC AGGAAACTATCAACACGAGTGTTGTTTTTAAAGGTAACGATTTTCCAAGT ACAAATTATTTATAAAACTGTTTTTTTTATTGACTCATTAAACAAAGTAC CTTTTCAATATTAAAATAAACTTAATTTTTACACCAATTACCAATGGCAG ATGCATGAGAATGATATCAGCTCGTAGTAAGTTAATAATCTTGGCATTTT ACGGGAGAGTTCTATTGATCTGTTGACAATAATATTAGTCTAGCAAGCTA AACGACTTAATTCAGAGTTTTCCCAAGGGACTTTTAGAATTTGTTCAGTT TTCTCACACACACAAAAAAACGAAAAATTATATTGGTTACAATTCCACGA TTGGGTGCTAAGTATTGGATAATCTACTCCCATTTTATTGAGATTTTTCT TCTTTTCATTATCAGACGCCACGTGGACGTAGAGGATTTAAAAGAATTTA CGGAAGCCGATAAATCGGACATGAACGGTGCATTTTCTATTGTCCATCAT AAACGGTAAGAATCGCCAGCGCCGTAACATCCGGACTTGGTTAAAATATG ACACACTTGTTTCTTGGGTGAATAAACAGTGGTTTTATCTTTTGGAACTA CCCCGGTGGAGGTCCTATAAATTAACCGTTGTATGTTCGTTCATTCGTTC GTTAGTTACTAGCTTTTCTCGAGATTGGCTCATTAGTTGTTTCTGATTTT TTGCACAAAGATGTGTAACTATAAATCCTCGAATGTGACGGAGCCCGAGT TTCGAAAAAAAAATTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACG GCTAAAAAACAGGTTTTTTGGACTTTGTGAAAAATTGGATCATCAACATT TTTCTGATTTCTTGCATGACAGTAGGGTACCATCATAGGTAAAAGATGGC TCAAGCAGATTTCTGCTTCTTTGTTGGCTCAAAAAACGCATGTTTATCTA TAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTC TATTTCTTTATGAGATAGATGTTTTTTTTGCTCATGAGGGCTTAATTTTG AATAATATGTGTTTAGACATGAAATTTTGGTCGCGTAGCGTGTTTTTATG GAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACATTATCAATTACT TAGGTATTAGCTTTTCTCGAGATTGGGTCTGTCATTCTTTATGATTTTTT GCTCAAAGATGCATGCCTATAAACCCTCGAATGTGACGGAGATTGATTTT CGAAAAAAATTTGTTTTTGGGCAAATTTGGTTTTTTGCATGAAAGTAGTT AAAAAGTGGCTCAACTCAAGCAGATTTTTGTAAAAAAAGAATTCTGTTGA CTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAATAAGCATACAT CAATGTTCAATAGCCAAATTACTCAATTTTTTGATGATATAGATGTTTTT TTTGCTCAATAAGTCTTGAAAATAAAAAATTATTTCAAGAGCATGAAATT TTGGTTTCCAAACGGTTTTTTATAAGAAACAAACGACTAATTTTAATAGA TCGTAACTATTTTTAATAGATCCTAACTATTTGTGTTCTGAATGATTGTT AAACGGTCATGCTCACGTAGATAGCAATTATATATGTGTTAAATGCATAA CCAGGTAGGTCCTTAAAACAGGGGGGGGGGGNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNTAAATACTAAAATGGGTGGTATCTATGTGTTAAATGT TGAAAAAATTTTACTACCTGGGTAGTTAAAACTGGTAAAATTAGCAAATT TTAAGCTATTTTTGTAATTCTTTTAATTTTTTTGGATGACTTTTCTGAAA AAATCTGAAAATTTTTATAACTCGAAAAATTTTTCTGTTGGAAATTTGTT TGCTGCAAACAAAAAATTCTCGAGATTTTTTGTCCATATAAAAAAGACTT TAATTCTAAGGGCAAAACATTAATTTTTGCGCAAAGTGAAAAATGTTTCA CAGAAATAATCATTTTTTAGCTTTTTTTGTAAAATCAGTCCGAAAAGCAA CCAAAAAATAGGTGGTCTTTAGACAAATTGTCTCAAAAACTTTTACTACC AGGGTAGTAAAATACCTCTTCCAAGAGTCTGGGTGGTGGTATGTAAAAAG TCGTAAAAATCCTTTTACTACTCATATATGTCTGAGATTTTACTACCGAC CCCCCCCCCTGCTTAAAAGTATCACTTGTTTCTTTTTTTTTAATTTAGAT TTCCTGAATATTTTTCCTTCTTTAATTTAATTTTATGGTCCTGGAGTTTT TCGCGGCTAATACTTTGGGACAGTCTGGACTGGTCTGGAGGATTTTGCAC ACTTTTTCCTTGGGTGAAACTAACGTGTTCATTCATCATTATCTTATATA TTTTGATAATGGATGTTCCCGTTTTAATCAGAATTTTTTTCAATTCCCTG AATTCTCATTATTGACCTTTGTGTCTCAAACACAAAAAGGGCCAGTATTC CAAGGGTGTTGGGTGCTTTTCAGTGAGAAAATTTTAGGATTGAGTATCCG GTGAACAAACAATCCCATGTTTTCTTTAGATCTTATTTCCATTCCAACAA CAACCAACAAATACCAGACCTCGGTGAATTTGGATACAACAGCGAAGATG AAGGGCCTCCTGATTGGCTCAAAGAAAAGACTGGAGATGTAAGCGATTAT TCTAAGATAATTTGAAAGAAGATTGCCTACCATTTTGAAAAGAGGCTTTG AAAATACTTTTTAACCGAAAGTGCTACGACGATCTCCAAGTTTTCCATGA ATTATATGTAAATTAAAGGACATAAAAAAGTGGAGCTCCTCTTACGTTAT GAACTTCAAAATCCGTTTCCAAATGTTTAACGAAATTTGGGACTATTAAT ATTGAGGCCAGTTGGTGAGGTGGAATAGATTTTCGAACGTCATGCAATCT ATTTTAGCCATTTGATTCGCCAAAATCTGTGACGTAACGTTCGAAAATCC ATCCCACCTCACCTAGCCGGGCCAGCTATGAACAGTCCCTTACTTAGATA CCTGATGAAGAGTTGTTTTAACCCTGTCATCTATTTATTTTATATATTGA CAGATGATTGAAGATTTTACAGATGTGAATAGAGGAGAAAAAGTTCTCAT GAAATTATGGAACCTGCACGTCCTAGAAAGCAGGTATGTCCTGTCCTGTC TTACTGATGCATAAAATACGTCCCCTCACCTATCTACTGTACCCAAACCA GGCTTTCTGTTTGAATTTATAGTCGATTGACGTCAAAATTGTTTAAAATG TTGTTTGCATTAAGGTAAATAACAAAGGCATAGCGTCAGCCTGGGTTTAG GTCCCAAGCAAAAATTAGGTTCTCCCTGGAGTTTTAAGTCCCCCCAAAGA TTTATGAATTTTTTGTTAGCCCCCAGGACTTTTGACCCTAGACACTTTCA AAAAGTTGATCCAGTAAAAAATTTTTTTTCAATGTAAATTGCGTTCAGTT CTAAGTTAAAGATAAAATATTTTGTACACTTTATATAAAAATAATGCGCC ACAGGGGGAAATTTTTCAGATTCATGAGCTTCAATTTGAGTAATTGAAGC CAACTATTAAGCTGAATTATTTCAGCCCCCACTTTAAGTGATGAGATTTT AGCTCCTCCCCAAGTACATAGGTCCCCCCAAAAAAGTGGTGTACTTCCAG CCCCCTTCTTTTTTGGGAAAATTTCAGAGTGTAACCCCCCCTCCCCCCAA CCAGCAGGGGGGGCTGACGCTATGAAAGGTAGATAACTCAAACACTTATA GTCACTGCCACAGATTTTTCGACTTTCCGTTGAGGAAGATTTGAGCTAGT TTTTCCCGATAGAAGAGACTGACTTTATAGTTAATTAGGAAATTATCAAT ATCGTGAAATTACTTAATTGTTTTAATTCTTTTTTTACAGTTACGTTGCT GATTTCATGGTTGCATTGGGTTGTGAAACGTTCGTTCAAAAATACGGTCA CGTGATCCTCAATGAAGGCTTGACCAGAAATTTCCTCATCCATTTGAACA ATTTATTGGAATTTCAAGTGATCAGTCAGTCACATATTGTGTCTGCTATT AAGAAACTCTCTCAGATGAAAAAGAATATGAAAAGCGTTACAAACGAGGA ATGAGACTGCTGCGTGCGTTTGGTGTATGGTTTTTAGCTCTTGTCAACCA TGGTCGACGTATAGCCTTAACCCTCTTCGAGAGAATATTATGGTTAGCGA GGAATAATACTGGTGCGTGGGTTAGGTGTATAGTTCTTGTCAACCATGGA CGAAATGTAGGCTTCTTTGAGGATCCCATACTGGAGGGGTATCGATGTTG ACAAGTTGTATGATTAGTAATCATATTGTACACTGAAATTTTATTAATTA TTATGAAAAAGAAGTCAGCCATCTTGAATTAAGTGTAAATCGAATCGGTA GAAAATCATTTCATCTGATTGATATCAGAGAGCATTCGACGCATGGAATG TTGTTAGAAATGTATTGATTTAGCGGGTGCGGAATCTTGACTTCCGTAGT TTGTGATTGCTATCATTTTTCCACTTGAACAGTAGAATCACAAAGCCCCT CAATGAAATGCAATCCTCGAGAATATCAAACAAGAAGATAATGACTCGGA AAAGCATTGTGGTTGAATGTTTAAACTTTTCACTAGTACCTACATGGCAT GGTAAACCTTTCAAAGGGAATTAAATTCTACCAATTATGTCTGATATTAC GTAGAAAACTAGAATATTTGGGCTCATTGACTTACTGATTTGTGCCAAAA TGATTAAAACTTCTCAAGCAACTGCAAGCAAGTCAAGTTAAGGTCATTCT CTCTACTCTTGTGTGCTTAATTGTATGGGGGCGGTCATTTTGCAATTTTT AGAAAAATCACCTCCATATCCAGCCATATCACTTTATAATGACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004425TCONS_00004425Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004425-proteinTCONS_00004425-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:667064..676857 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SUZ12polycomb protein SUZ12 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.68 20.52 16.89 16.35 48.8 37.97 31.8 35.97 18.51 20.47 16.93 10.61 12.22 12.41 15.21 20.01 23.47 22.38 8.31 8.86 14.77 14.8 27.06 28.53 21.85 24.15 9.63 8.39 19.02 21.95