XLOC_002534 (gene) - C. hemisphaerica

Overview
NameXLOC_002534
Unique NameXLOC_002534
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000045:461009..466668+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002534 ID=XLOC_002534|Name=XLOC_002534|organism=Clytia hemisphaerica|type=gene|length=5660bp|location=Sequence derived from alignment at sc0000045:461009..466668+ (Clytia hemisphaerica)
TTAATAACCATTAATTATGCCACTGGCATCATATGTGATCGCTCATTCTT TTTGGTCCTGTGCTAGTAGGAGCACCTCGACCATACCACCCTGCTTTTGA TCTCTCCCAAATAAAAGCTGAGGAGCAACTAAAGGAAATCAATCATTGCT TAGTTTATCACATTATCAGCTTACTGATAAAGCCAAATAATattctggcg tccatcagtaagGTAAATAAAGAGCAATACATTGTAAATAAATGGGCGTG GCCCGATAATTTATCAACAAATTGACGTCACaaataaattttagtttttg aCGTTAACGTTGTAATGTCTTCATTTCTTTTAACTCGCAGCACGGTCATG TACGTTGGGGGCTGTCGGATATTCTCAAGGTCGGATATTTCCCCTCTAGT TCATTCATAGGTAAGATGGTCGAAGTTGATAGCCGATACGATGGCATAAA GAAGCTATATGGACCTGGAAGGATCTTGGATCAAGCAAAATGTAAAATAC TTTGCACGAAGGATGTAGTTCGCGATGCTTTGGGTAGAGGAAAATGTGAT GCAGCTTTAGAACCTTCGAATTGGATAACTTCAACAAAGTTTTTCCATAA GGTATGGAAATACTCTGTTCACTAGATTTTGGTACATTAAGTTTGCCGAT GTGGCGTTAAATATATGCTGTTTATAATGAATTCATGTTGAAAATGTTAA gctatttttcaatttattttctcCAATTCTTACCTAGTCTGCAAAAGTAG CATTTACTTCTTCAGCTATACTATGAAGTAGAAGAGAATCAGGCAAAAGT TAAGAGTAACAGTTTGCTTAGGCTTTGAGTATTTCACGTTTGAACCTGcg caaagtttgtttttgttttatgagTGAAATTTATGCCACTTCGGAACAGG TAGCTTGAGACTTAGTTGACTTAGTTGTTTGAGATTTAGTTGAAAATCGG TCTATGAATTTTATCACTTTAATCTCAATTTTATCATACATATAACCGAT AATATTTCGCTAATGTTTCAACCTTAGGGTGATACGACGGGCTTTGAGAG AGCGAAGATTGCCGATCCCAAGGTGAATCGCAAATCGTCATTGAAACTCG GCTTTCACAAACCACGCTATCGATGTACGACGACCGAAGAATTCATTTGG CATAAAAATGCGGAAATACCAGAACGAGTGGTCCCGGACAATTCCGTCAA TATACCGGTAAATACTCTTACAgttgagtctctttaactcgaacctttat TACTCGAATATCTCCTTTACTccgtgtgtgttcgagttatggagactcca ctttaTTCAGTTTTGATCAGAATGTACTAAAGGAGCTTCAATTATCTATG ACCACAAATTTTGATCTCCTTGCTTTTACGAGTGATTTTTAGACTTAATA TCAAGATCTCCACTTGGTTTCTTTTAAGGAATTCTGCCCAAACCTTGCAG TGGAGAAAACGGTGAAAGATTCGATTTACACCAGTAGTTTTTCCGTCGAT CCTTCTGTACCACGTCCAAAGCCCAAACCGTATGAAGAACGTAAAAAATA CACGAACGATCTACGTGAAACACATTTCAAGCTTGGAAGCTGGGACGAGG CAAATTTTACTGAAACACAACATTCGTTAGGTTTCGAGAAGCGATACAAC GAAGAAGGCCTGTCGAACGGTAGTAACCGCGTTGTTGCTAGTAATCGCCA TTTATCCAAAGTGTTCCGCCAAGGGGACTACAATCGACTTGATCGTAAAT CGATTAATAAGACAATCACCAAAAGAGATTTTCCGACACCTCCGGTGAGA GATAGACGTGATTTGAAATTCATTCACGAATTCACGGAGCCTTCCTATCA TCACTCTTCTCATTTCGACCTGGGCTCGGCAAGTTCTGCAGATCCCAAGA AACTTAGTTCTTCACTTTATCACAAAGATTTCGCCACCAAAGCCCTGGTT CCTTCTTATGATCGAGATCGACTTTTAAAAGAAGCAACCAGTGGCACCCA TCATTTAGAGCTCTTCCGGAAAGAATCCAATCCACGGCTTTTCACAACAA CTaaagaatcaaatttcaaagattACGGAACTCAAAATGTTTTACAGTTG AAGCAGGAAAGATTCAAATGTTGCTCAGAATTTAAAGACCGTATTGGCAA GGATCAGCACCAGATATACCATGACCAGCTCAATGCTGGTCGAAATGAAC TACCCAATCAACGCATgctttcaatgacgtcatccaaTTTTCATAGACCG CCATTGGTTCACAATAAATATGATTTCGAAATTCCTACCAATAACCATTT ATCTGGCAACTTTGATTGCATGCGGTCAGCGATTTCCGAAGCCCATGAGA AGTACACGCCACACCAAAGTTCATCCCTCAAAACTCGACAAGAATGTCAC GACAGACGCCGCGATAACAAATCAACGCACTTCTCCCTCTGGAACGGCCC GCTAGATAGGAAGATAACCGAACAAGAGTCTCAATTCCGTGATCGACCGC CTCTTGATCCGAGCGTTCCACCAGCTGGAAAATATCAACCTGTAGGTCAC AAATATCAGCATATTTTCTCAACATCAAAACCAACCATTCAAAACATTCC ACAGTCATCCTTTATGATGGATTTCAAGAACCCTTCTTCATAGTAAGTGA ATTATGTTGACCTACGAAAAAGTTTAACGGTTCGTTTGCTCGTCACTAAC TGCTCTTTAGATACCATCTTCCCACGTGTTTTAGACTCAAAAGCCCTGtg atatttcaaatttcaagtttATCTTTCATTTTCGCAATCAATGAAGAACA TCACATAATCAAGGACACAAAGACCACAAAGCTTTACTTTTATGTGGGCC ACCTGATAAATTTAGGCGCTGGTTTAAGAAGTAACTTAGAGCGTCATGAT GAGGCTCTATTATGCCGCATATGATGAATTTAATGACTTAAGCAATCATC TTTGAAATCTTCTGCATATCCTCAACAGCTCTGAGAATGAAAAATACTTC CGATACTAAAAAAATACTTAGTAGTGAATCTACATCAATAAGCATCCCTG TATTACAGACCATCTGGCCAAAATTCATCTCAAGTTGGAAAAATAGTTTA AAAGATTGAAATCTTGGGATTACTTGCTGGATTTTTGAAACCCCAACACT TTGAAATAGTGTAGAATTCTCCCGTTGGCATTCGGCTTCAACTCATTGAC TTAGTTTGCACAGAGTCAGAGAGACAGAGGTGTTACATTCAATCATAAAC CATCATAAATTCATTAGCCTTCTTCGACATGTCAAAACTTTCATATTAAT TTAATTCATGTTCTCAGTAAAACACCATACGATGCTATCAGCAAGAGCAG ATCATGTCGCTGGGAAGAACCATTAGCGAGCTATTTGTTCCATACTGGAG ATGGTCAGTCAAAAGGTATATCCAATTTTTAGATTGTCTCTTTCGAAAAT AGGCCCGCTAATAATATGAAATGGTTGGTGTATTTACAAATAAGTTCTAC TATAGGTATTATAATAGGTTTTGTTAGCGTAAAAGGGTTTTATACCCTTG CAAGGGGTTATTAAgtcaaaaaaatcgaaaatcggcttgagaaaattttt gaatattctcGGAAACTTAGGAAGATTTTTCGtcgatttttccaaaatat ttatcCTTTGAGAGAAACATTTACTGACTTACGATTCACTTCTAAGACGT ACTGTCGTTTAGGACGATATTCAGCTGTCTCGTAGTACAAGGATTTAAAA tgaatttcctttttcttttcagatatACAGAAAACAACGACTGAACGACA TTTTATTTCTCCTATTNCAATTGAAGCAGGAAAGATTCAAATGTTGCTCA GAATTCAAAGACCGTATTGGCAAGGATCAGCACCAGATATACCATGACCA GCTCAATGCTGGTCGAAATGAACTACCCAATCAACGCATgctttcaatga cgtcatccaaTTTTCATAGACCGCCATTGGTTCACAATAAATATGATTTC GAAATTCCAACCAATAACCATTTATCTGGCAACTTTGATTGCATGCGGTC AGCGATTTCTGAAGCCCATGAGAAGTACACGCCACACCAAAGTTCATCCC TCAAAACTCGACAAGAATGTCACGACAGACGCCGCGATAACAAATCAACG CACTTCTCCCTCTGGAACGGCCCGCTAGATAGGAAGATAACCGAACAAGA GTCTCAATTCCGTGATCGACCGCCTCTTGATCCGAGCGTTCCACCAGCTG GAAAATATCAACCTGTAGGTCACAAATATCAGCATATTTTCTCAACATCA AAACCAACCATTCAAAACATTCCACAGTCATCCTTTATGATGGATTTCAA GAACCCTTCTTCATAGTAAGTGAATTATGTTGACCTACGAAAAAGTTTAA CGGTTCGTTTGCTCGTCACTAACTGCTCTTTAGATACCATCTTCCCACGT GTTTTGGACTCAAAAGCCCTGtgatatttcaaatttcaagtttATCTTTC ATTTTCGCAATCAATGAAGAACATCACATAATCAAGGACACAAAGACCAC AAAGCTTTACTTTTATGTGGGCCACCTGATAAATTTAGGCGCTGGTTTAA GAAGTAACTTAGAGCGTCATGATGAGGCTCTATTATGCCGCATATGATGA ATTTAATGACTTAAGCAATCATCTTTGAAATCTTCTGCATATCCTTAACA GCTCTGAGAATGAAAAATACTTCCAATACTAAAAAAATACTTAGTAGTGA ATCTACATCAATAAGCATCCCTGTATCACAGACCATCTGGCCAAAATTCA TCTCAAGTTGGAAAAATAGTTTAAAAGATTGAAATCTTGGGATTACTTGC TGGATTTTTGAAACCCCAACACTTTGAAATAGTGTAGAATTCTCCCGTTG GCATTCGGCTTCAACTCATTGACTTAGTTTGCACAGAGTCAGAGAGACAG AGGTGTTACATTCAATCATAAACCATCATAAATTCAATTCATTAGCCTTC TTCGACATGTCAAAACTTTCATATTAATTTAATTCATGTTCTCAGTAAAA CACCATACGATGCTATCAGCAAGAGCAGATCATGTCGCTGGGAAGAACCA TTAGCGAGCTATTTGTTCCATACTGGAGATGGTCAGTCAAAAGGTATATC CAATTTTTAGATTGTCTCTTTCGAAAATAGGCCCGCTAATAATATGAAAT GGTTGGTGTATTTACAAATAAGTTCTACTATAGGTATTATAATAGGTTTT GTTAGCGTAAAAGGGTTTTATACCCTTGCAAGGGGTTATTAAgtcaaaaa aatcgaaaatcggcttgagaaaatttttgaatattctcGGAAACTTAGGA AGATTTTTCGtcgatttttccaaaatatttatcCTTTGAGAGAAACATTT ACTGACTTACGATTCACTTCTAAGACGTACTGTCGTTTAGGACGATATTC AGCTGTCTCGTAGTACAAGGATTTAAAAtgaatttcctttttcttttcag atatACAGAAAACAACGACTGAACGACATTTTATTTCTCCTATCGAACAG TTGATGAAACAAAAGAGATTTCTCGGCTCCCGTACACTTTGACCCGACCA CCAATACTTTCACCATTTTTAGTAGAATAGCTATTAGAATTTTTCTTTGG TAATTTTATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004502TCONS_00004502Clytia hemisphaericatranscript
TCONS_00004503TCONS_00004503Clytia hemisphaericatranscript
TCONS_00004504TCONS_00004504Clytia hemisphaericatranscript
TCONS_00004505TCONS_00004505Clytia hemisphaericatranscript
TCONS_00004506TCONS_00004506Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004503-proteinTCONS_00004503-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:461009..466668 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.38 0.32 0.12 0.14 0.26 0.22 0.51 0.54 0.54 0.6 0.72 0.44 1.37 1.99 0.44 0.62 0.67 1.32 2.05 1.46 1.55 1.43 0.38 0.47 187.02 59.92 0.86 0.89 0 0.02