XLOC_002558 (gene) - C. hemisphaerica

Overview
NameXLOC_002558
Unique NameXLOC_002558
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000045:318659..324587-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002558 ID=XLOC_002558|Name=XLOC_002558|organism=Clytia hemisphaerica|type=gene|length=5929bp|location=Sequence derived from alignment at sc0000045:318659..324587- (Clytia hemisphaerica)
CCGGGGGTTGGAGAATTTTCGAAAAATTAACAAGCGTGGGAGGGGGCGTT TATTTGGAACCTAAGAGTATGGAAAAAAGGACAGTTTTCATGTTGGTTAT CTTCCAAACAAAATTATATAAAAATTAAAACCAATAAATAATACGATGTC GACAATTCGATCAAAAAATATATTTAAAGAAAGTCACAAAAAATTATGCT AAAGTTTTGAAAATTATGCCAAATGAAAAAGTAATTAAATATATTACAAA TCCTAAAGATATACTTACTAGAATCAATCAATGCTAAGACGAAATGGCTT TTTCAAGAAATAATTGTGTAACAAACCAAAAATCCAAAATCTTCTTGACA ACCTTGTCAGTTTACACTATAGACAGCTCCAGGCTTTTCAAGGCTTTAAG AACATGACGTAACCTATACACGTTTTTTTATAAGAACAAACTATGTAAGA GCATAAGGCTTCGATGTTCAAAATATTAAGAACAAGTTAAGAACATTTTA AGGCTTCGCAGACTCTAAAACACCCAATTTCTTAAGAAAATGGACAAAAT ACTCAATAAATGAAGAAAATAAGAAAACTTTAAGAACATTTAGGCTTAAC AGAACATCCAAAAGCTTCAAAATTTTTGGATGTTCTTATAAAAGAAACGT GTAGTTTATGTGAATTACCGAAAGGTCTAAAGCTAAACAAATATCAGTGT TTATCTCTTAATTGTATTTTTTAAATAAAATTCATTCAGAAGCAGCCAAC GAGCCCATTTCCCCAAAATATCTGTTTCCCTTTTTCAGGAGAGAGCTTTT TTGAAAAATTGGGAAACAGATTCAATTTTCTAGGAAAGACCTTTTCCTTA AAACTATCTGTTTCCCCGCTCCAGCTGATGACGTCATCAGAGAGAAACAG ATCAATATTTCTAGGAGATGACATGATAAATTGGGAAACAGATATCTGTT TCCAAAAAGATGATATTGCATTGGAAACAGATTGAACTTTCTGATGGAAA ACAGATATCAATCACAAAGAGCAAGGGAAACAGATGAAAATTTCCAGGAG GGGAAACAGATATCCTATTCCTTATAATAAGCTTGGGAGAACAGATCAAA ATTTTACTTCTGAAAATTGTGGAAACAGACCAAATTTTCTAGGGAAGATA CTTTTAGATTAAAAATTTAGGTTTGGAGGAGAAACAGATTTATTTCTAGG AATAAGATATTTGGAACTTCAGAACTTTTGGCCAACAGATCAAATTTCCA GGAAGGCTATGCCTGGGAAACAGATGTTTAAAAAAAGGTCCTCGCTGGAT GCTTTCGTTCATTTTCAGTGAATATTTTCAAAATAAACCCCAAGCCTCTG ATATTAATATTAAAGTTGATAATATACAAATAACCAAATATGTAAAAATA ATAACGAAATTAGTTTCAAAAATGAAAGATACATTACCCTTAAGATATTC CCTAATTTTTGTATGTATTACGTTTATATTACGTTCCCTAAAGAATGGGT CAATAAAAAAACACTTTCTTTATCCAGATGAGGTATGTAAAAGGCTTTAT GCAATCTCATTGAAAAAAAAAAGCCATTATCAAAGAGCTTTCGAAACTAT AATCATGAATATTGTTCCGAAATTAGTGGAAATAATAGGCAACTCAAATT CTAATGCCTTCAATAATAGTAACCAATATAAGAAATAAAATCCAAACCAA TGTTAATTAAAAAATAAATGATAAAAAATGCTTTTTGTTACTTTATTTTT CACTTTTTGTTTATATTTGATGCATGTAAAAATCTATGGCAGTGAGTTTT TTGTTCATTAAATCACCTCGATCAAGTATTTTGTGTAGATTTCAAAGGAG TATCCTCGGTTATCTCAGCTTTTTTTGTTGTTCGTCGTCTCAAATACAAA ATGACCAGCAATAAAGCAATCAAAGCCAACGCAACTAAAATGATCAGAAT GATGTAACCAATTTTGATTTTTGTCTCTTCTCCCAAGATCTCACAGTTTT GTCCTGAATATCCACCGACACACAAACATTGATATTTATCTGAAGTTTCA TCCAAAGGTTGGCAAGTTCCATTGTTTTGGCAAGGATTGTTGAAATAACA AGCTTTTTCAATCCCACATTTCTCTCCAAGAAATCCTGAACTGCAGTTGC ACATAAAAGTGTCTACAATTTCCAAACATGTTCCATTGTTTTGGCAAGGA TTGTTGAAATAACAAGGTTTTTCAATCTCACATTTCTCTCCAAGAAATCC TGAACTGCAGTTGCACATAAAAGTGTCTACAATTTTCAAACATGTTCCAT TATTTTGGCAAGGATTATCCAGACATGCGTTTTCGAACTGACAAAATCTT CCCTGATTCTTCTCGGAGCACACGCAAGTATAATCCAGCTTATCGACAAC TTTACATGTTGAATTATTCTGACATTCATTCAAAGAACAAGCAGTGCATT TCAGTTTGTTGGTCCGGTAAAGGTCTTCGTAAATATCATCATCCTTCAAG TCTGCTGGTGTTTTACAATTCCCAAAAATTAAAAATTTATCATTACCATT AAAAAAGTATTGCATGGTGTTAAATAAAGCACAGTCACAATGCAATGGGT TCTGCTCAAGATAAAGCTCATTAGGTTTCAAAGCAAACCAATTTTTTTGA AGCGTTGTCAAACTGTTGTTGGTAAGATCTACGGATAGAGAATTGAAAGT CTTTGGTGGAAAGTCTGTAAATTGATTACTTTTCATCTTCAGAATCACTA ACCGTTGGTTCCGGAACACACCTTCAGGGAGGGAGGTCAGCTTATTATAA CTGAGCCATAACCTTTCTAACTTGGTAGCCGCTGCAAACGCATCTCTTTC AATTTTCCCAAGAGCATTTCCATCAAAACTAATCCACAGCAGGTTCTCGG CACCATTTAGTGTACCGTTTTTCAACATTTCAATCTGATTATTCTCTGCA AAGACCTTTTGGAGGTTTTGTAGGTTCTCAAAAATGTTTGGTTCAATCTC TGTAAGAGTGTTGCTGAAAATGTCAAGGATCTTGATATTTTGGTAGCCGA GAAAATCATCCCTGCTAATCTTGCTGATTTTGTTTTGATCAATCGAAAAA CGGTGGACAGATGGTATGTAGTCAGATACATTTGCTGGTGGCTTTGTCAG AAGATTTTGTCCAAGTTCAATTATCTCCAACTTGCTGAATTTGGTGAAAG CTTCAGCTGGGAAATTAGTAATCAAATTGACTTTCAGTATTAACTCTTCT GCTGTAAGTGGGTCACCAGTATGGGCAATTTCAAGNNNNGCTCCAGCTGA TGACGTCATCAGAGAGAAACAGATCAATATTTCTAGGAGATGACATGATA AATTGGGAAACAGATATCTGTTTCCAAAAAGATGATATTGCATTGGAAAC AGATTGAACTTTCTGATGGAAAACAGATATCAATCACAAAGAGCAAGGGA AACAGATGAAAATTTCCAGGAGGGGAAACAGATATCCTATTCCTTATAAT AAGCTTGGGAGAACAGATCAAAATTTTACTTCTGAAAATTGTGGAAACAG ACCAAATTTTCTAGGGAAGATACTTTTAGATTAAAAATTTAGGTTTGGAG GAGAAACAGATTTATTTCTAGGAATAAGATATTTGGAACTTCAGAACTTT TGGCCAACAGATCAAATTTCCAGGAAGGCTATGCCTGGGAAACAGATGTT TAAAAAAAGGTCCTCGCTGGATGCTTTCGTTCATTTTCAGTGAATATTTT CAAAATAAACCCCAAGCCTCTGATATTAATATTAAAGTTGATAATATACA AATAACCAAATATGTAAAAATAATAACGAAATTAGTTTCAAAAATGAAAG ATACATTACCCTTAAGATATTCCCTAATTTTTGTATGTATTACGTTTATA TTACGTTCCCTAAAGAATGGGTCAATAAAAAAACACTTTCTTTATCCAGA TGAGGTATGTAAAAGGCTTTATGCAATCTCATTGAAAAAAAAAAGCCATT ATCAAAGAGCTTTCGAAACTATAATCATGAATATTGTTCCGAAATTAGTG GAAATAATAGGCAACTCAAATTCTAATGCCTTCAATAATAGTAACCAATA TAAGAAATAAAATCCAAACCAATGTTAATTAAAAAATAAATGATAAAAAA TGCTTTTTGTTACTTTATTTTTCACTTTTTGTTTATATTTGATGCATGTA AAAATCTATGGCAGTGAGTTTTTTGTTCATTAAATCACCTCGATCAAGTA TTTTGTGTAGATTTCAAAGGAGTATCCTCGGTTATCTCAGCTTTTTTTGT TGTTCGTCGTCTCAAATACAAAATGACCAGCAATAAAGCAATCAAAGCCA ACGCAACTAAAATGATCAGAATGATGTAACCAATTTTGATTTTTGTCTCT TCTCCCAAGATCTCACAGTTTTGTCCTGAATATCCACCGACACACAAACA TTGATATTTATCTGAAGTTTCATCCAAAGGTTGGCAAGTTCCATTGTTTT GGCAAGGATTGTTGAAATAACAAGCTTTTTCAATTTCACATTTCTCTCCA AGAAATCCTGAACTGCAGTTGCACATAAAAGTGTCTACAATTCTCAAACA TGTTCCATTGTTTTGGCAAGGATTGTTGAAATAACAAGGTTTTTCAATCT CACATTTCTCTCCAAGAAATCCTGAACTGCAGTTGCACATAAAGGTGTCT ACAATTTTCAAACATGTTCCATTATGTTGACAAGGATTATCCAGACATGC GTTTTCGAACTGACAAAATCTTCCCTGATTCTTCTCGGAGCACACGCAAG TATAATCCAGCTTATCGACAACTTTACATGTTGAATTATTCTGACATTCA TTCAAAGAACAAGCAGTGCATTTCAGTTTGTTGGTCCGGTAAAGGTCTTC GTAAATATCATCATCCTTCAACTCTGCTGGTGTTTTACAATTCCCAAAAA TTAAAAATTTATCATTACCATTAAAAAAGTATTGCATGGTGTTATATAAA GCACAGTCACAATGCAATGGGTTCTGCTCAAGATAAAGCTCATTAGGTTT CAAAGCAAACCAATTTTTTTGAAGCGTTGTCAAACTGTTGTTGGTAAGAT CTACGGATAGAGAATTGAAAGTCTTTGGTGGAAAGTCTGTAAATTGATTA CTTTTCATCTTCAGAATCACTAACCGTTGGTTCCGGAACACACCTTCAGG GAGGGAGGTCAGCTTATTATAACTGAGCCATAACCTTTCTAACTTGGTAG CCGCTGCAAACGCATCTCTTTCAATTTTCCCAAGAGCATTTCCATCAAAA CTAATCCACAGCAGGTTCTCGGCACCATTTAGTGTACCGTTTTTCAACAT TTCAATCTGATTATTCTCTGCAAAGACCTTTTGGAGGTTTTGTAGGTTCT CAAAAATGTTTGGTTCAATCTCTGTAAGAGTGTTGCTGAAAATGTCAAGG ATCTTGATATTTTGGTAGCCGAGAAAATCATTCCTGCTAATCTTGCTGAT TTNGATCTTGATATTTTGGTAGCCGAGAAAATCATCCCTGCTAATCTTGC TGATTTTGTTTTGATCAATCGAAAAACGGTGGACAGATGGTATGTAGTCA GATACATTTGCTGGTGGCTTTGTCAGAAGATTTTGTCCAAGTTCAATAAT CTCCAACTTGCTGAATTTGGTGAAAGCTTCAGCTGGGAAATCAGTAATCA AATTGACTTTCAGTATTAACTCTTCTGCTGTAAGTGGGTCACCAGTACGG GCAATTTCAAGTAACACAGTATCATTGATGTTTTGTCCTCCGCAAGTCCA TTTCAATCGTGAACATTGGCATTGTTCAGGACATGTTTGCGCTTGTGAAT AAATGATGAAGACCACAAGCAAAATGAATAGAAATCCCTTCATTGTTACT GCCTGGTACGCTCCTCATTGGCCGGATCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004547TCONS_00004547Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:318659..324587 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.31 5.86 4.21 4.4 12.64 8.6 6.61 7.28 5.08 6.42 4.47 3.56 3.11 2.94 5.07 5.87 2.29 2.49 3.83 5.45 2.75 2.75 5.59 5.17 1.7 2.7 18.61 16.56 7.96 8.5