XLOC_002649 (gene) - C. hemisphaerica

Overview
NameXLOC_002649
Unique NameXLOC_002649
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000047:604477..613673-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002649 ID=XLOC_002649|Name=XLOC_002649|organism=Clytia hemisphaerica|type=gene|length=9197bp|location=Sequence derived from alignment at sc0000047:604477..613673- (Clytia hemisphaerica)
ACTCAGTCCAGCTCAGTCGGTCTCTTTGGCTCTTGTTATTTTTTCGTATA GCAAAATTACTTCAAGCTGAACCCGACTAGACAGACACTCACCGACAACC GGAAATACTTCACTACCAACTACCCTACGGATCCACATGACTGGCCCCCA CAGACTGACAGAGACTTCAACAATACTGATTGGAAAAGAACCGAAAGATA ACAGAAGATAGGTGAAACACCATTTTTTTTAAACTATAGGGAAGCTAGGT TCTTTGCATGATAATTTTTTATTTCATTTTCAGGTTATTTTTGGGCCAAA ATGGCAAAACATTCTTTTGACCCAAAACAACATATTTGTCAGTCTGGGAA ATCCTCTCAATTGCACGCTTATGTTCCGAGGCCGTAAGCGCGCAATTACA CGGTTATCAAAATGGCAGAATTTTTAAGCGTGTAATTACACGCTTATCGA AATTGTTCTGAAACAGGCGGTAAGCGTTTAAGCAAGATTGACGGGTGACA GCCGCACAAGTGTTACGCGTAAGCCAAATCGCGTATTACGAACAACCTCT AAATTGCCGAGTACAGGAGAAAAAAAATCGAAATTCAAAATGGCGGCCAA GCCCACGCTGATAACTATCAAAAATCTTCGTTTTTCAATCAGCTATCAGT TAGTCACACTAGGAAATCTAGCTTTCAGAAAAAACAACATCAGTCATCTA CAGGATGTATTTTGCACAACAAGGATGAGGGTTACCTGAATCAAGTTCGC AAGACAATTAATTAAAACTTGAAAGTTTGAAACAAAATAAAACGTGCAGC AGCCAAAATCAACCAACCAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGG ATGGTCACGTGACCAGAATTTTTATCCAGGGAAATGCCGTGGCCGCAATG TTTTGCTTTAGTGAGATTGACCATTTTGTTGTTTAGATTTGAGTGGGCGA AATTTCTGTACAAACCAAAATATGGCTTCGTTGGAATACCGGTTGAAACA CTTGTGGCCGGGTGACGGCTTTTGCGGTAAGCGTGCAACTGCACGCTTTA AAATTTCCTATATTTTTGACACGCAATTCCTTCCAAAAGCTCTGTTGAAT TTCAAAAGCCTAGGGCAGTTTTACTCAAAATTTATTGTAGAAGAAGATTC CATAAAAATGGATTGCCCGTTAAACCANGAAACAGCCTATCCGTTGGTGC GCGGATCTAGGTGGGTTCCGCCTCCCCCGTAGATCTTTTTCTTGGGAAGT TGATCTTCAAATTAGTTTGAAGGTTGGCTTGGCTCAAATTTTTTCATCTA TGGCTTAAATTTTAGGCAATTTCTCATAGTTTTTGAAAATGTTAATTTCA TTAAAGAGCGCCGGGTTATTTTTTCATGAATCCCTTTAGAAGTTTTGCGG CGCATTTCTCTGCTTGAGAGTCAAGTAAACGATATGGCGCTTTTGCAGCA TTAATCTTTGATACGCATTTTGGCGGGAAGCTAGTGTGACTAACTGGCTA TTGCAGCTCAATAAATCAATGAAATAATTTGAAATAAAAAGTAAACAAAC CTTGAACCTTTCATGAATCCAAATAAATAAAGGTATTCNTTGAACCCCTT GAAATCCCTAAGCAATTTCAACCGGGGCTGGAGCGGGCGTAAATTATAAC CATGCAATTGCGCGCTTACGCCCTCGGAACATAAGCGTGCATTGAGAGGA TTTCCCAGACTGTTTGTGTTCAGTATCAGAATCAGGCCACACACGCACCG GACATTCCGATGTTTTGTCTGGTGCTGAAAAACTTGAAACCTTTGGTCCA GCGTTAGTCCAGTGCAGTCAGGACCTATTTGGTCTTTTTTAACATTAGTT CGGATAGAATAAAAACATACCTGATCAACACAACCAAACCTTCTGTCTTG CGTTCACTTCCTTCACAACAACTTTCGTTTTTGCTTATGTAGGTTTTAAA ATCCACAAGTAATGAACCTCTTATAGCTTTATCTGAATAAATCTGGTTGA AAACCTTCTATCAGGTTTCATTCCTTACGTTTTTTATTCACGTGGTGAAC CAGTTTCCCCGATTTCCCGATAATTAAAAATTGGAACTTTCCCGTGGGCG CGATTGGGCTTACCGCCGTCGCGAAATATTTTTCGTGAAAATTTACCGTA TTCTAACGCTAATATAATCTAGATAGGAAACAAATATTAAATTTGATCTT TTTTTGCTCGTATTTCTAAATTTCAAGATAAAAAGAACTATCTATGAATT ATTTTCTTTAACGGGTGTTGAATCGACATTGACATATTTAATGATGTCAT AATCAATACCGTGCATATTTTGTCAACATCCTTTTCATTGGATAAATACC ACTAAAATATACAAAGATAAGTAAACATAAATGTATCGCCCGCGAGCACG GCTTAGCTAAGCGCACCTCTCTTATTCATTATCTAAGAATTGAAGCGGGC AAAGATTACCGCGCAGCTGATAGCGGACGAAGGTTTTTTTGAAGATATTT TCAGTTATAATCCAAGGTAGAACAAACTAAACATAGAAAGGGGGTATTTT TTAGTGCTTTATACGATGATCGCTATATTTTTTGAATTCTATGTTTAGAT TTTTCTACCCAGCCCTGTTGCTATGTACGCGCGCCCTGTTGCAAAGACAT TTGCTTGAAATCGAAAGCGAAACCGAGATTATTTAGCGCACACTGCCGTT TGCGTAATATCGATAAAGTGAAATGAGGTCCTGACTGGTCCAGTGTTAAT TTTTAGAACTTCTGGACACCAGGACGCACCAGATCCCTGGAAACTCAAGT CTGGTGTTTAGGATTGGGCCATTTCAGAATTAGTCCTAAAAATAGACCTA ATCGGCCAATCAGAAGCGTTTCAACAAAAAATTGTAGAAATTTTTGTCCA AAACTGCCCGTCTACTATCGAGTTCAGAAAAAATCGTAAGTAGACGGGGT CCTAGCCTGGGAATCCAAGCTCATAATTTTAGAAAAAACAAAAAATACCT CACCTCACAAAGTTCTAAAATTATAGAGCTTGGTGCAGGTAGATTAGTCN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNGAATGTTATAAACAGTCTGTGTGTGAACCCTTG TTGACAGAGTTTCTGAACTTTGGAAACCCAGGCAAACACACATAATCAAC TTACCATAAAACTCCTCAACAATCTATAAAGACTTTCAAAGCTACTAAAA ACCAAATAAAAACATCAGCCACATGTATTTAGACTTCCAGCCAACAGCCA TTTTGTTTTGAAATGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNTATTTGTTTTCCTTTTTTCTGCAGAGTCAGCTTTTTC CATAAATTATGCGCGCGCATCGAAATAATCAAAATGCGCGCAAAAGTACT GCTAAGTAATACGCCGAAAGCTGGCCAATCAGGCTGAACCTGCATTGCAG GGAAAAATCTCCCTGCAGGCGAGTTACCTGCGCCAAGCGTTAAACCAGCA GCAAAAATATCATAAACTAGACTCTGAAAAAAGTTTAACGCTTGGATTCC CAGGCTAACGGGGTCCCATCTATTCCAGAATTTGTCTGTAACAGGGGGGC GGACGACACAGGATTTCACCATCAAAATTCAAAATTTCCAAGGTGAGAGA AGAAAATGTATGAATTTCCAAGGCAATTGAACTGAAACTTGAAAAGACAA AATAGAGTGGAATTTCCGATGCATTTTGCAAAAGTACATAGATTTTCATC AGAATTTCCGACTACCACTGGAAAAGAAAAATTATTTCCGAGGCTAGAAA AAATTAAAAAATGCACGTCGTCCGACGGGGGTATACAGAAATTTTCTGGA ATGGCCCATTGTTGTCCGGTCCCGGACACGGTGGCGTGGGAGAGGGTATA GCACCCTAAGTTCCCTGGGAGAGGCACTTAGGCAAAAATGGTTTCCGATA GAGTTCGGCCATCAATGGGGGGTTTGTACTTTTACGGTGTGACGGGATTG GCCCTTTTTTAGTATGGTATTACGGGATTTAACGAAAAAAGTGACAAGAA AACGGAATTTTAAAATCAGACAGTGACGGTATATAGCCTTATTTTTGTCA TTATGCCGATATTTTAACCTCTATATACAACCCGGTGAAACGGTGTTATT ATTTTTTTCAATTTTCAGGATTCCGGGATTGAGCAAAAATTGTGACGGGA AAACGATATTTCAGACCCCTACAAACCAGTGCCCCCCCCCCCCCGGCNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNAAACATGGGACTGTTTGATATCTGGCCTAAAACTCAACATGATA CCTAGCCCAAAACTCAACATCCTTACAAAAGTTGTCTTTCTGATTTCCCA AACATTTGTTTCAAGCGTTCACTTCCACAATAATTTATGTATATATTTAC TATTTTGGTCAGTCGGATTCACAACATATACGCGGTTTTTAGTCACGCGA CTGAAGTGCCTACTAAGTGGGGGGCGTACGATATTTTGTAATTGCGGAAA TCGACCCTTTTTCCTTCGGAATTTCGGAAATTGGGCACAATTCCTTCGGT ATTTCGGAATGCTGAAATTGTTTCTGTACCGGAAATCCATGAATTTTTGC TTCGGAATTTCGGTATTATAAAGTTTTTATCCCCCTTTTTTCGGAATTCA TGCATGAAAAATCAAATTTGATGAAAAATTAGTGAAAACAAGGATAATAA CACAAAAAAATCGGTATTGGAATTGCAAGTACTTTTTTACGGAATCTTGG AAATTTTAGCAAAATTATTAGATATTTCGGAAATTGCAAACCCTGTACGC CCCCCTACTAAAACAATCCAGGGGTAAGAATCAAAGCAACACATCAGGTT ATTCGTAATCCAGCGTAAACTGTTTGATATCTGGCCTTTATTTTCACTTA TAAATCTCTTTGATAACAAATATTTTTTGATAACTCCACCAAGTTTATCA ATCTCATGTTAAAGGCAACCCGAAGACTCCCCTTTCTCTAGCTCCTCTTT CTCTTGCTCTAGGTAGACAGTATAGACCTAACTCTTCATACAAAAATTAC GGGAAACCATGGCGTTCTAAATTGCAAAAAAAACGCCACATAGAAGATCT TTCAGTAAAAAAATACAACTTTTCTATTTTTCTTTTTTTTTTGTAAAAGT TCTAGGAATGAAAATAAAAGGATAATGATAATTGAATTACTATCCACTGA TGATCCGCGGCGCCATCTTAAGGCTAGAATCGCTTCGCGTACTCCTCGTT TGAGAAAATGATTGACTGATTAAATTTTTCACCCGCGCAGGAGTTCGCGG GCATTCTGCGAGCGTTCTGCAAGCGTTCCCGGCTCAATCCTCGTCTCAAT CCTCAGGCTGTGTTAAAAATGGTAGACTCAGCTGTGACAGATCATTTCGA TGGCAGTTGTTGAAGTAATTACAAGACTCTTGACAGAAAATCTTTTGTTT TATTGTCAATGCAGTGCCGTTATTAATTTTGTTAGATCTGATATATTGAT GTTTGTAAGTGCACTTTATAGTTTTGATTCCCTTTGAAGAATCATATTCT GGTTTTCATGTTCTTAGATGCTGTTTTAGAGCTTTAGAGCTAGCCTGGTA GGAGAGGACGCAACTACTTTCCCTGGATTTCTCCACTTACTCTGTAACGT TATCCATTTCCTAGTTCCTGAGCATCAAGCAGAGAGGTATTAAGTACCAT TTTGGGAATCTTTGGTATGACCCGGCTAGGGGCTGAACCCACGACCTTCC ACATCGTATGTGGATGCTTTTCCTTCATGCTACAGCTACAAGACTAAACT GCCTGAAAGCTGTTAAGAAAATTATTTATCCTTTGTTGATGACCCCTAGG CTTTAGTGGCTAGAACTCGCACTAACACTTAGCATTTTTGCCAGGATTTA TGTTCTCCTTGTCTTTCCGCCGCTGAAAACATAAAACAACCAGTCAAAGA ATTGTAGCTAAACTGTAGCTAGCCTCCAGAAATGTTTTCAAAACCCTAGA TTCGACCTTGGCATGCTAGCACTAAACTACCTAGTCACTGCAGAAAATGG AATATTCTAAAATATTTGTAAAGAGAAAAACTTTCTCCTGCATGAAAATT TTCTTCTTAAATTGTATGCTTTTTGGGGATTTTCTCTCGCTTTCTCCAAA TTTAATTTCAACATTTTTTACATTTTGCCTTGCATCTTGAAAAAATTCCA AGGTAAAAATCAAATTACACCTGAAAATTAGCTCAATTACCCGTTTTTTG AATCAGGTATTAGGACTTAAACATAACAAAATTTTTATTATTATTCTCAA GATGATGTCAGGGCAATAATAAGATATGACAAAATGATAGTCAAATATGA CAGGAGGCTGTTTAAGACAAAGAGGATTAGTTTTTAACACAGTTTTTTTG TATAACATTATATCTGTCTCTGCAATTTTGAGCAATTTCCAATATTGTTA GTGTAAAATTAAGAAAGTTTTTGACCAAGAAGTGCTCAAGAATGTTAAAA ATGTTTTTTGATAATATTCTGAAAAAAAATCTCTCAGCACTTTGCCAGAA AATTGTGAAAATCAGCCTCTCATAATTGTTGAACATGTTTAAAAATCACG AGAAATCGCTGCAAAAAAGCAATTTTTATGGCAGAAAAACTTAGGGTATG AATGTTTAAAAGTGTAACTGTGAACAGCTGTGAAGAGTCATTTTTATTTT CTGGCTGTATTTCATTTTTGGAACCTAGACTTTCATAATATTTCCTAACA TTGTAAATCGGCTGATGTTTGACCTGATTTATGACCTATGATTTATTGTC TACCAGATGTTTCTTATTTGATATTTTTGTTCAAAGTTGTGTTTATTTTG AGAATGATGTGTTGAGTGAACAAAATTGCTGTGACAATCATTCTCTCAAA ATTCAATAGTTGCAGTCAAGCCACATAATCATGTTTTTCTTAAAACAGAC CTCGTAATTCGAAATTTCAAATTGACATCCAACAAGACCCTGAAATTTCC ACATATTCCTCACATAATTAATTAAATCAGCCAATTTCTGAGAAAGCCAT TTCTTCGCTTCTTCTGGATTCTGCTCCTATAGACCATATCTCAAATGCCT GATGAACGCTCCTCGTCAATTTATTTTCGAAAATATACAGCTATTCAAGA CAAGTAGTTCATATTTAAAAAAGTACGAAAGAAATTCCGAATAGTGAATT CATCATCATAATCTTGATCAGGAAAATAGGCTATATTTCTATATATCGAG TATAACCTCACTCATCTTTCAGGATTGTAAAATGAAAAATTACAAACTTG CTACTTCTGTCTAAAAATGGAAAAAATGCGCTAATTCCTAGTTCAAGTTC ACCTATTTATGCTCTGAAAGCGAGATATAATAATGGGTCAGTTGCCTTAA CAACAGAATCTCATTCTGATAGAGTGAATATTAATTTATTAATTGAGAAT TTCTTGTTTTGCTCAGGCCCATTACAATTCGCAAACTATGGAGAAGAAAC TGGATCGAATGATCAATGAATCACAGGAACTATTGGAAAGAGCGCGTACG CTGAATCAAATCCCTGGAGCATCAAAACTGGAACGGAAAATCAACGCCGA GCTAAAATGCCTTATGAAATTCAAAAAGAAACCACCAAATTCTTTAGAAA ACCATTTGAAAAGTACAAATTTGACCAATTTACGTGCTGTATTACGTGCT GTAGAGAATTCACCTGATGTCGAATGTGTTTTATCAACTTTCTATTACGA GCTTGATGATATCGGTGACCAGCTTGTTGTAGATGCTGTTGTGACTGGTG GTTACAAATGGATCAAAGTGGTTGCCAGGAAACCGTTAGCTGTCCATCGT ATCATGATCGGGGAAGGACAATACGGTGATAAAGACATTGTTCGCGTCGC GAGAGACTACATCGCAGCTAGTGATCAAAATCCAATCAACTACGAATCCC CTAGTATTTGTTTTTTGTTTCCAAAGGGTTTGACACAGACTGTATATGAT AATTTGAAGATTACTGGTGTGTACACTATCGGGAAAGTTCTTCCCGACCC TGATTATGAGAATCTAGAAGCGTGGAATGAGTTGCAAGACGAAACTGCGA TGAGTGATATCACCAAATTGTTGAGTGATTTCACCATACGTTGTACTCGT GTTAATTTAGATATCACAACTCTTATTGTTCTAACATCGAACTTAACGAA CGGTTATTGTCGATATATTTTTAAAGAGGATATTTTGACTAAACAAGCAG CAAACGAAGCTGCAAATCCTGCTTTACCAGAACTATTGAAATATTTGGAA GGTAAAGAACTTGTTTGTTGTCAAACTGCTTATAATAATTTTCAAGAAAT CTTGAAAACGGTCGGTGGTACCATGGAAAAAGGGAGAGCTAAGGAACTGT TTGATCGTGTTACCTTAATACCGGACGATCCAGCTTTCTATGCAATGGAG CTTGACGAAAGCGCTAGCATTAAAGAAAGATCAAAAATCATTTTCGGCAC TGGAGAAACGAATCAAGCTATTACAACAACTGCAAATACTGCTTTTGTTC GAGCAGCTGTTAATCAAGGAATTAAATTTAGCTCTTATTTCCACGCCTCT CGCGCTTTGACTGAGCAGAAACAAGCAAAAGCAACTCCTATTGAATAGAA TTTTATATGCATATTTTCATACTGTTTGTAGTTTTTTTCCTCGTTTTTTT ATTGATAGTGTTGCAGTTTTATGTTGTTTTGGTCAGCTTTGCAATGAATT TTGATATGTTCCTACACGAGTTTGCGTTCTATACGTTTTAATTTTCTATT TTTTTAAACGAAAAAATGTAATAAGACTAATATTCAAAAACAACTTTGCA AACATCATTAAATAGTGCCACCTTTGGGTTATTTTACAGGTCTAGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004700TCONS_00004700Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004700-proteinTCONS_00004700-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000047supercontigsc0000047:604477..613673 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
C7orf25UPF0415 protein C7orf25 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.6 28.34 14.27 14.45 13.29 9.97 13.43 13.41 9.91 10.67 9.18 6.94 9.32 11.15 10.61 10.59 10.46 9.83 6.97 5.15 7.95 6.87 26.12 22.63 12.87 14.85 6.45 4.89 13.71 14.89