XLOC_002762 (gene) - C. hemisphaerica

Overview
NameXLOC_002762
Unique NameXLOC_002762
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000049:602056..613622+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002762 ID=XLOC_002762|Name=XLOC_002762|organism=Clytia hemisphaerica|type=gene|length=11567bp|location=Sequence derived from alignment at sc0000049:602056..613622+ (Clytia hemisphaerica)
TTGTTTTCGATCGTCAATATAATGAAAGACGAAAGATGAGACTTCTTTAC tggctttttttctttttgttagtGGATGCGATACTTTCAGTACAGAAAAA CAATCGAAATGCACCAAGAAAACAATGGAGAAAAGCTCAACGACTTCATC AAAGCAAAACTTCCAAGAATGTGAGAGTCCAGCATCAGAAGAACAAACAA TACCATCCTGTCAAAACGATGAACAAACAATACCATCATGTCAAAACGAT TACAAAGAAGAAACAACAACATAAAGAGGACAAGATTGATGTGGTAAAGC AGAACCACAAATATCTAAGAATTCGTCTTCAATTTCGCGACCTTTCTGGC AAAAGGCCTCATGTCTATCTTTACCTGAGGAAGAAAGACCAAGTGAACAA ACCAACAAATGACCTTTCCAAGAGGAGCAGTACTGGTAATTCCACCACTA GCTCAACTAACACCAATCTCACCAGAGCTGACACAGATCACCTCCTCAAG GAAATACAGAAAGTGATCCATCGCATCGTCAATTTTGTCCATAGGCGATC ATTGGAGAATCTATCGCAACATGATTTGCGCttaataaaaatcaaattga aaagTCTGGTCGATCAAGTAGAGATGAACGACTTCTTTGTCACTACGCAC GATGATGGAAAACGAAGTCATGGTCCTGATACAAAGGAAGAGATGGACTC ACTTTCAAACCAGAACGAGGTTAACGAATTAACTAACAGCACAAATGACA CCACTAACACTAGTGAACGCAATGATTCAACCAATGGAACCAAAAATCAC GAAGATAACAATGCGAACGGAACAGTTGGAACGGACGCACACAAAGTCAC AGAAAGAAATGTAACAGGAATAAGTGGAAATCAAGAGAACGGAACAAACG GAAACAACGGAACAGAAACAGATTTACACCAAGcaattcaaaataataat gaaaGAAGTGATCCGAACATAACGAACGCAAATACCACCGAGCAACAAAA CGATCCTTATGCGACCATCAAAAGACAAGAGTTACCAGAGATCTTGGATC CTACATTGGTGTTGAAAGAAGATTTTAATTTGCCACAAATCAAAGAGATG ATTGCATCACCGATATCTCTCCATGACATTCACACCGAATTCACGCCAGT AGTGGACGATCTGGAACAGAATTCGTGGATCCCAGATCGCCTATGGAAAC AAAATCAGCCACCTGTTCTCAGCACTGGCAAGAATTTGCCTCCTCAGACG AGGAAATATATTTCCAACcggagaaaacttttgaaactcaAAGATCGACT GAACAAATCGgaacaaagaaaatcaaacaaaCAGACTCCAAGCCGATCAA CATCGGGTCAACCTTCACCCTTATCAATGAAGGGAAACCAGTCTCAAAGT AAAACACCACAGACGTTTTACAGTCCTCAGTTGAAGGCAAAACACCAAAT ACTTCTCATCTCAGAAAACCTTGCTAGTCTCCCAACACTTCATAATGCAA CAATGAGGAGCAGCGTTCGACCCCCGCACGCAATGCATGACGGGACTAAC ACAACACTATCCAATCATACAAAGGGATATCagaatcaaacaaaaaatac aacCACCTTGACGAACACTGGTTACAATTTGCAGTGGTTTGAAGTTCTCA ATGTGCAAGGGCGAGCACCACACATGATTAACAGGACATCGATTCCACCA ACAAACAATTCATTAAAGCAAGATGACCAAAATCAAATGAATGGCAACAA TTCCTCACAAGCCAACGCAGAAGTTCGCCATAAGATTGGTAGGAGTGCCC AATCACCTTATGCCAATCCAGATTTCCATATGCTTGGCATGGCGAATGGC AACAATAAAAACACAGAAGGGGATGATCGTCATAAGTTACACTTGaccaa agaagaaaacaaaaccaATAAAGTTGCAGCCAGAAAGATGAAGAAATCGG ATATCTCAACACCACCATTACAAAACGATTACGAAGAAGCCATTGGTACC ATAGCCAACGAATTAATGGAGCTACTTCAAATAGATGAACCAGacatcaa caaaagaaacctcCACAACAAAGGagaaagaaagattcgaaaacgACGCT CGATCGGTGAAAAACATAAAAGGAGAGCGGTCGACAAATTACCCATATTC GGGCGTTTCACCGAACGGTTGGCCACGAAACAACAGCATTCGAAGAGAGG GAAGAAGCAGAAGAAAGGGAAATCGAAAGCTAAACATAAATTGAGATTCT CTTctgcaaaaattgaaaggtgAGGGAGAATCTATCAGctgattattttc attttctttcgtGTGTGCAAATCAATATATGTCTCTATTAAGCTGATCTA TGACATATAAATACAATggagtctccttaactcgaatgtctccttaaatc GAGCAAATTGTTGACCCCTACGGTTAACAATGCCTCATAAAACTTACTCT AtgactcgaaatttccttaactcgaataaatttgCGTTTTCTGTGCGTTT TCGAGTAATAGAGAACTCCGCTGAATTCTAAAATCGATCCGATTGtttct tttttgactttgcAGAAAACAAAAGGTTTTATCAAACGACTAAACTTTTA GAGTAAACACACAAGCAATTCTATCGGAATAGGTCTGATACTGATTCGTC AACTTGTACATTTTTCTGAATATTTAGACACGGAATGATTCGTCAAACAA AACAACATTTCCATAAGCAGATCAAAATAGACTCAAGTTCATCGGGAATC ACTGCCACCAAAAGGAAAAACCAGCATGTCAGATGGAAGAACAAAACATT TGCAAAGGATCGCacgcaaaaaaaacaaaatggacaaaaaagtcaacaaa caTACCTAGGTGCAAAACAGCAGCCAAATGAAAAACAACCAATGGAGCAG AAGAAAAGTCAGCCACCATCTCAACTTGAACAGCGTGCAGATCAAGAAAG CCGACGTGAGCAAGATCAGACCGACATTAAACAATCCTCCTCAAGAAGAA ACCCAGGAAAAAGCATGGATCAAAATTCAGAACCAtctaaacaaaaccaa aacaaaatcaatGATTTGGTCCACCAAAAGCAATACATCAAACAAAACCC AgaatcgaaaaataaaatcaattcaGTGCTCAAACAACAGAAGCGAGCAA TGAGGATAAAGGGGCAGCTACTTCACAAGAAGACCTACATCACAGGACAG CAAGGGCAGCCATACTTTGGTGGTGGGGGTGGTGGTGATGGTGGATCAAG GTGGGTGAGAGTTGACCCAGATGATCGGTATGGAGAGCAATGGTTTCAAA CGAACAACGGTGAGGAGAACTTTTTCTTTCTGCTAACCCGATATTTTTTG GGTTTATTGTCCAATCTCAGCAATCCAATATGACTTGCCAGCAAATGAAT ACTACCCAAATACCAATTACTGTCAGGTTCTTCTGACATAAGATTAGATA AGCATTACGACTTCTGGAAGTTTAAAGTATTAATGGAATGTAAATTGGAA GTAATGAAAAGCTTTCAAGAGATCAGGTGGTTTTCAATAAGTgcatattt ttttcgattaAGATTTTCAATGTTCTAAAAGATGATTTCATTTTGGTGAC CTAAATAACAGATCGGAAGGAGGTTGTTGTAAGTTCTGTCCACAACTTTC ATGGTTCAGACCCTGCAGAATGAAACTAATGCCAACCTTCTGATCCTTTA TTGAAAAACTATCtgcaatcagtgacaaaatacttggcacaaaagggaaa ttcaccggtgttttgaaaccacaatcgatttgtaagtgctctaaagtagg ttcgaagggtagagttttaactctgagttttaacgctagacttaagactg aaaaataatccttagggcttgaaatatagcctagaaaccaataaatccct cacATATCGAAATAATTGATGAAATCAAGTCGAAGGCCTGAAATtgtcgc tcgaacttcaattttcgaaaaatggtaaattaacCAAAAAtaccaatata ttatggcactgattgtggACTAATTTTGTAACCTATAGGACGTTTTTTGA CGGTAAAAACACATGAAGACTGAGAAACACATAAAAAAGGGAATTATCTT TGTGATCCGCAAGTTTATATATCGTACTACACTATAGTGGTGCAGGCTAG CCACTGGTATCTTTGAAAATGACAAGAattatttaatgaaaattcatttc tcaaaatttttacaaTCTTGCTCGTAAATCGGACAGATTATTGAAGTTAA ACCCTTCATGGTTTAACCATGCATGTTCCCCAATAACACATGTCAATGGC CTGATTCAACTGTATGGTTACGTAAGTATAAAAGAGAGAAGTTTGATTGA TGAGAGAAAACCATGGGATTATTTTCGagttgacacatttttctactAGA ATAAACATTGATTATAAAATGAATACTTTATTAGGAAAAGGCCATGGTGG CCATCAAAAtaaaatacacactttttttataagaatggtgctTTTTAACT TCATCATGGTATATTCTTAGCTTCTTAGGGAAAATGATCTTAGAATATTC TTATAGTATTCTCAGGTTAGAATCCAAacccaatacacgtttttttttta taagaacgtcaaaaattttcgaagcctttgaatgttcttagttttttgga tttgatgcctaaaaatgttcttaaaatgttcttattttcagcattttttg agcattttgatgtaatttcttaagaaattgcatgtttttaagtctccaaa gccttagtatgttcttagaatgttcttattttcagcattttttgagcatt ttgatgtaatttcttaagaaattgcatgtttttaagtctccaaagcctta gtatgttcttagaatgttcttaggtttttgggcttcgaagccttatgttc ttatatagtttgttcttataaaaaaacgtgtatatcagTTTAAACATGTA ATACTTACCTTAGGCAAAAATATGGTATGGTATTCTTAATCATTTTAGGG GGTAATTGTCAATAAATGCTCTAAAATTGGCAATTATAGGTATTATATGT CTAGCTAacaaattctatgatggtgatattcttagcatgttcttaatttt tggacaCTTTATCAATAAAATTCTTATATAGTATATTCCTATAAAAAGAA GTACGATAATGACTAGTTAGGACTTATCACTCAGAGTTGTATAACTAGAG TATTTTTAAATTTCCCATTACACCACTATTGTTGCTTCATTGCAGATAGT CTAACGGTCTAATAAGTCAATAAGCGATATACCAATCACCAGACAAATCA TGTGACAAAGTCCATTCCAGGATACACTTTACCTTGTATACACGTGATTT ATTGAGATTTGTTATTGCAAGGAAagaaattatgtaaaaaacTTGTGTGT GGTGGCGAGGTACACAAGGGTTTACCAAAAGTCTCTAAAATTCTCCCTTT CAAGAGTACGAAAATACAGAAAAATGAACACAGGTGGCCAGAAAAAGCAG AGCTTATGCCGATTCCACCTTTTGAGTAAAATCTCTCCTTTTTGGCTTTT TAACAAACGGGTGGTAAACACCACCGATCCATTgcgaaattgaaaattta acacTTTAACACTTAAACCTCGACAAAAATTCGGCCCAGTCTTCTAAAAC AGCAGATTTTGCGCTATGACTTCTAAACTGTGTGGATGTTGGGCCGGTAA TTGCATTCGAAGTTATACGTGTTAAGGTTTTCGTATGTAATACGTGGGGG GGGgaggcgtacggtatttcgaaattgcgaaaaccgaccctttttttcgg aatttcggaaatcgggcagAACTTCTTCGGTAATtcggaattttgaaatt gtatcggtatcggaaatcacgaaaccatgaatttttgcttcgaaatttcg gtagtttttatccccctttttcggaattcatacatgaaaaatcaaatttg atgaaaaattagtcaaaaagacgaaaaatacccaaaaaatcggtatcgga atcaCAAgtattttttacggaatttcggaaattttggcaaaattattcgg tattgcggaaatcgcaaaccccgtacgccctcTAATACATTCTTTTCTGT GAGTGAGaacaagtgaatttttcttGAGACTCAAACTGTTTTTATCCTGT TTAAATTCTTAGGACAAAATTGAGCTTTGATCCAATTTCCCTATTATTTT GACCCTTGCATAACTTAAAATTCCATTCCACGCTCCGCCCTGTTCTTATT TCTTGACGATTTGAGCATTATGGTTCTtagagacccccccccccccccNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCTGTCACGCAATTTtc cccaaattcacgcattcgcgcagcgttttttcgcaattcacgcatttttt gttcacagctttccaattcacacattcacgcatttttttttttaattttc acgtattcacgcaagtgaaaaagcccattcatgCATttacgcaaaccgct gggggacTTCTTATGAAGTTCTActtataaaaaagagggtagagACTATC CATGAAAGAGAATACCTTTTTCGTCTTCCATAGAGCCATTGGAAAGCCAC CAACGAAACGGGATCGGTGTTCCTTATGTTGCACCACCTCAAACGTCCAT ACAAGTCAGTGTCGTTGATGCCGCTCACCTGAAAGCAGATGATGCTTTAC AAAGAATTTGTTCAAACGCAAGGTGTGAAGGAGGCAACGAAGTTGAAAGA AATCAGGTAAGGCTCTAGTTAGATTTTCTCTCGAAACTTCTAAAGACCGA AAAATGTTTTAACTGAGAAAATTGTTTCGAAATAAAGTAGACCGACCACT TGAGGAAAACTTTACAAAGAAACATGAAACATATACAGACTTTTCAATCC TTAACGATTTTGGGAAACACAGCGTATAATAACTCTTCGGGGTCTACGGG CAAATTAGGACCGAAGAAGTAAATAATGAAATCATGTCTGTCTGTCTTAA GGTCTTAACAGGTAAAAAAAGGGAATCTACGCACATTGTTATGAAAATTA TGGAAGATGTTTTCCTTCGAGAAACAAACTTGCAGAAGCAAAAAAAACTG CTCCAAAAAATGgcagttcgttatttttaaactttcctcgttggaaagat aattatgATCAGCTGGCTtgttaagattttaaaaatcttcttaaaatttg aaaatgaacaaactttattaattcatttttctttacttgttgaaaaataa agtatgattcgaaaatttttttataaatatcaaGATGTTCAAATTCTCAT TCTTTTGAACGGTCCAAATATTGACTAATAATTGGTATTCATCATATCTT TTTGGTATTcgaattagaaaatttttcgaaatatttttgaaacgcAAACG TCATCCGTCATCTAAATCTAAATATAgaaatcatattttttttgGTCAAA AGTTACAATATTCCTGAAAAGGTCCAAATGGGTGAgaaattgcttaaaaa tgctctaaatgGAACTATTATAGAGATCTGAATTCACTTTTGAAATCAGT GGGGTTCAAAGTTTCAGAAAGGTGTATTACTGTCAGTTTCAACCGAAGGA TTTTCCAATGTAAAATGATAGTTTTGATAAGAATGGAACAGGGATAATAG GAATCATTTTACATTCAAAGTCCTTCGGCTAAAACTGACcagtattatat ttttttacttgttgACAAATAAATGCATGATTCGAAAAAATCAGCTCTAC TTCTTTTCTGGTACAACAGAGAgcttatagtagggggaaatttgtaaaat cgctcgattgttttagtcaaagcacttgttatacatttttggaaagctaa gggttaGGGGAATCAAAAAAACTTGGGTGCCAATTTTCTTTCGGACACTT TGGTGTGAttttcggacaaatacgacggtctcaggcaaaaatcatagggt gaaaaattaatgaaaattttagcttgagaaaacggagacctgttgtatat ttttgcaaagctctcaaaaaatcaagattagtgatatatcgcgagtatag gtgatttcagtacctaactcgagatattgagcttccgaaagcgcaaaaac tgaacaaaacagctgtttctggctgaaaaacactgaaaaacactgttttt aaggatcaatatctcgagttaggtatagaaatcacctatactcgcaatat atcactaatcttaattttttgagacctttccaaaaatatacaacaggtct ccgttttctcaagctaaaattttcattaattttttaccctatgatttttg cctgagaccgtcgtatttgtccgaaaatcacaccaaagtgtccgaaaaaa aattggcacccaagttattttgattcccctacctcttagctttccaaaaa tgtataacaagtgctttgactaaaaaagtcgagcgacctaaaaaaaacga acaaatttccccctactattactTTTATTCTTTTACCCCTCTAACAAGTT TTTCGCTAAGTTTTATTTCATGTTTCGTAataagaggccccccagcggcc CTAATCACGCCACCACGCAAAAAAAATTTTCTCCATCACGCATCACGAAA ATCgctaaaatttgtcatcacgcaaaaaatagcgaaaaatagcccaaatc acgcatcacgcctcaaatttttgccctatcacgcatcacgccaaaatctt gatcacgccaccacgccaaaaaaaaactctaatcacgccatcacgcaaga aaaaaagtcccaatcacgccatcacgcaaaccgctgggggggggctcTAA TAAACTCATAAGTTCTAATCTAGATGAGCTATGAAGCCAAAATAATTCTT ACATGCActattttaaaactatttttatctGAGGGATTGTTTCTCAGATC GAattctcatattttttaatgttctGTCAATGCGGCTAATGAAAATCTAT TTGCAACATCTTATAAAACTTGTAACGATATTCTTTTTTGCATGCTTTCG TTacatttttaagcttattgAGTTTGTTTCAAGCcatctcggacgggaat tttatcaACGATTACCATCCCCTATACCAAAAGATATCAGAAAGGATTGC GTGCAGCTTAGATGAGTTGAGGGCTCTTTGAAATTAATCTAAGCTTTGTG AGAAGGGTTAATTTATACTGCTACAATCACAAAACCTAGTAAAACATGAC GTATCAAAATGAAGTAAATGACTGTTAGATTCAGAATagatagaaaaaaa tatcatgaaGATGGACAAAGGCGCGATTAaacttgcaaaaaaaaactcaa tttcataaaaatggataTATGCCCCTTTAGAATTgatggagggggggggg gggggggtacctaGACTGTGACCCTTTAAACACCCCAGTCTCACTTTGCT TCTGCTCGTTctctagcgaaaagagtttTTTATGTAGGtttatctataga ggtctgggATTCAGACTACTGTTTCACAGcctcggtggaactttttcGGG ATAAgaaattgaaatcccaatggacattgaaattctattgtttcaaggtt tAAAacatccagtggggatggttttggagaacaagttttaaacattgaat tcaaatggggatgaaatcaaagtcaatttccaatggggctgaaattccag agtATTTTCCCAACGGGGAAGGGATTTTTGCCAAATctttcagtggggct ggggtcccagcggatctgtgacaaataaaataaataaagtaGCGAGGTCA AAGATTTCAAatcgtttcaaaattttttcgataagtttaacagaaaaaat aattacGTGGTAAATTTTGACTCCTTTTGGGTCTAAAACGTGACTAGTTT CGTAATTTGCAACTTTAATCTTTTTGACAGAGCAAGATTTGAGGACACTG TTTTGACTATTAAGAGGGCGTATGACAAATATGAAAGGGACAATAGCAAG TCCTCTGTTATCAATTAAGATAAGAGAAGAAGACAAATGACCTTAACATG ACCTATGTCAACATAAAATACTATTCCAGATATATGTCAATTTTGAAGTA AATGACGATATCAGGTAGATCAACTGTCATTAGCAAAGAAGAAAGGGCTT ATTTGTTCTATTCAACTTGCACGAATTTGTTAATGAACTTTTTGAACCCA CTTACTTGAAATCTTCTGTGTTAAAACTCTTCAAAAGGTTCCTTGGAGAT TTTCAACAtgtgtttcaaaaatatttctacgAATCCATAATGTCGCCCTT TGGCTGGCTTGAAAAGTAGCCCTATACTttcatagaatttgaattaCTCA ATAAATACGAACGCCATAAAAAATTTTGGCTTAAACCTTGATTAGTTTTA TTTGCTTCTGAAATGTGATATTTTGTCTAAGAATTGGGTATTGCCAACAA GAATTTTCGGCTATGCCCTCGTACAGCGTGtatataaaatatcaaaaact tttcatcAATAGGAAAAAAGCGTACCTTCTTCATCAAGAAGTGAAGTCAA TAGCAGAGGAGAAGGTAGCCATGGCAATCTCATCAACATAAACATTGATG AAGACGAACAGCATGAACCACCAGTGTCTCAACCACATGAAATGATGGAA AACAACGTCATCAAGCCAGCGGTCTGTTTCCCTGACAACCACCAGAATGT TCCAGTACAACGACAAGAATCTGATAAAGGTACACGGTACCAAGAGGTTG TTAATGCCAGTCCAGTCGAAACGGCGCAAAATGGAGCAGTAGATAGAGAA AGAGACGATGATGAAATACGTGGTGCCATCAGGAGCATCCCTGCCAACGA TGATCGATCTATCAATAAGTTGGTCTCCATGCTGAACAACAATGAACAGC AATCGGGGAACGTTTTACGATATTTGGACCAACAACAGCAAGAAAGGAGT GTGGAAACATCAAATGGTGGTAGTGGACAGTCACAACAACTAAACGAAGA AAATCAGTCAGAATCGAATGAGCGAACAGATAATATGAAGGTGGATTCGA ATGATAATGACGGAGCAGTGATTTAACAAGTTTCGAGAAACGTTgaacaa aataaatcaaaataatttgaacTAAGAATTTACCATTTCACGATGATGAG AAACACGAAGTTTatttaaaatatgaaaattgactTACATTTAGAGCTGT AAATAGTTTTTCGATATCTAATGAAAACATAGAAGTACTTGAAAATAAGT TTGCTTCACATTATGGTGATTtaaatcagatggtttgagatttttggcCC ACGCAAAGCCTCGGTGGTGCCGAGTAAAACATCAAACAtgacaatgggct cttccagaaaatgtccaaacatgggggtggaggatatagtgtccagggag taaacttgctctgtttgggggtaattttgctctgtttgcgGGTAATTTGA AATTGTCcatggggtcaactgatgcttgtcggGGGGGGGTTGGACTTGCT Tcccggggggtcaaaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004876TCONS_00004876Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004876-proteinTCONS_00004876-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:602056..613622 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.02 0.04 0.01 0.03 0 0 0 0.03 0 0 0 0.01 0.02 8.88 7.13 0 0 4.83 4.61 0.71 0.91 4.25 3.29 3.14 2.12 0.12 0.21