XLOC_002797 (gene) - C. hemisphaerica

Overview
NameXLOC_002797
Unique NameXLOC_002797
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000049:65199..67200-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002797 ID=XLOC_002797|Name=XLOC_002797|organism=Clytia hemisphaerica|type=gene|length=2002bp|location=Sequence derived from alignment at sc0000049:65199..67200- (Clytia hemisphaerica)
CAGGCATTGTAAAAATAAGCAAAACAAAAAATAAAGGAAGAGTCTATACT
GCAAACTCGAGTACGAACTGATACTATCCCGTGACAATCATCATATTATC
ATATAACACCCATATTACTGTAGTACAATGATTATAAACGACTCCAGTTT
TGGCCAGTTTTTCAGAAAATCAAACCGTTAAAGAACGAACGCATCACCGA
GGAAAATATGCACTCAGAAAAAATTATTTTTGATAATTGTACTTCTTAGA
ATTTTGAACTACTCTCTCTATTATTCCATTATTTTAATAATCTTTCTGTA
ACATAAGATATTGGTCCCTTTAGCTAAAAAGTGGTATAAATTACTTTCTG
TCATTGGAATCTTTCTCTTATCCGAAGAAAATTTTTGGTCCTATGAAGAT
CGAATTAGAGAGAGTCAGCTGTACTCATTCATCAAGTTATTCTTGTTTTT
TGATTTCACCACATTTAGTCTTTTGGAGGTATAGGTCTTAACATGTGCCA
TACCAACCAAGGTTTATTAGGACCATCCATCATGTTTTTCCATTGCACAG
CTCCCAAATCTGTATTCCCAAGCTGTCCAATAACACATTGTCCGATAGGT
TCACCAGGTTCACCCTTATCATAATCAGCTACACAGAAAAGTAGAGAAAG
TTCATCCAAATCATCATAACTTGCTTCGAAAGCAAAACTAGCATTAAATG
TCGGGTTCAAAGTCATTGTTTTGAATGTTGTTTTACGTTTCTTGATTTTC
TTCCCGTCACGGATCAAGAAGAAAGTGACGTACGGGTCTGAGAAGCCGCT
GTCATCAACTGCCGCTAAATTTTTACAACTCAAGATAAATACCGCTAAAA
CACTTGAATTAGGTGCGTAGCCAAGCCCAATACAAATATGTCCTAGCTTT
GTATCTTTCCACGGTACTTTAGCCTCTGATTTGAACTCTGGTGCTAATAC
TTGTACCTTGGTCACCTTCCCTTTACTCATGTCGAGATCTTTAATGGAAA
CAATAGCTTCACCGAGCAAATCGTCTTTACCAAAATCATCATGCATCACT
CGAAAGATCAAATCACTCATTTTAAAACCATTATAAATTATTTTCTTGAA
ATTAAATGTTTCTTCAAATTTTGGGTGATGGTTATTATTCTTGACTTTGG
TTTTATAGGATTTCTTAGCAGCCGGTTTTAGTTTAACTTCAACATACGGA
TCCGGAGCTTCTTCATCTTCGGGCTCCGGCGGTAAATCTTTACATTCGTG
CACCGTAACAATGGCTATACTTTCCTCCTGATCAAAATCAACAGTATATC
GAATCTGTGCAAGTTTGATTTCGGACAAAGCGTCAAACTGTGTTGCTTCT
ATGTTATAATCCATTTCATCGACACGTTGAAAAGTCCGCTCTCGATAATT
TGGTCCAAATAAATGGTTTTTACGTAGATCTAACTTTCCTGGAACTTCAG
CTTTCTCCTCTTTCGGGCGACAGAATCGGCAGCATATACAACACGTGACC
AGCCAAATAAAAACAATAACACCTGCTGTGATACCGAGCGTTTGTTCGGG
AGGAATGGGGAGACTTTCTAAGAAATTCCAAAATGTTGTATATGCAAGTT
TGATGTAATGAACGACCTTTTCTAAGATTTCATTCCAATCAATATTACTC
ATTTTCTCATTTGCTGTTGTGGTTTTCTCCTCAATCAATATTATTTATTG
ATGATTTTTGTTTAAATTCTCTAAATAATCAAAAACATGAAATTTCGAAG
GGATGGGTATTCAGTATTGACCAAAATCTCAAACATTGAAATCTTAGAAG
ACAAGCTTCATTCAAAAATATTTTAGTCCTTTACCCCTCCATTCCTAGAC
TGAAGTTTTCTTTCTGATGACGATGAGTCCAGTTAAGTAGACTAAAAGCA
CTTGACGAGGGTTGCCATTTTGAAAGAAAATCACTAGAAATCCACTAAAA
ATATATACCGGATCACATAACCGAGGAAACCAGTCTATAAAAAAACTTTA
AG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004949TCONS_00004949Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004949-proteinTCONS_00004949-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:65199..67200 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SYT4synaptotagmin-4 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4	0.33	0.54	0.42	0.45	0.42	2.09	2.33	0.32	0.33	1.68	1.11	4.09	3.21	1.84	3.46	1.32	2.16	1.07	2.25	1.11	1.09	1.11	0.99	1.21	1.46	0.73	0.17	0.11	0.11