XLOC_002937 (gene) - C. hemisphaerica

Overview
NameXLOC_002937
Unique NameXLOC_002937
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000051:660092..665644+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002937 ID=XLOC_002937|Name=XLOC_002937|organism=Clytia hemisphaerica|type=gene|length=5553bp|location=Sequence derived from alignment at sc0000051:660092..665644+ (Clytia hemisphaerica)
CAGAGAATGGCGAAAAATTTCAACATTGCGAAGATGTTAGAAGATGTAAG
TTGAAAATTCCTTCCAAAGAGTCAGGTTTATTAGGGAGGCCCTATTATTA
CAGAAGATATACATAACTGGCGGAAAAAATGGCAGGGATCGTCTTTCTTG
GGGAATCGAATATGGATTTTCTTTACAAAGTTGTAAATCCTATAGAACTT
TGTAAAACGTATAGAACCTTATAACTTAAGCCGTGACTAGTTGACaactt
tagataaaaaataCGAAAGTaagtcagaaaaaacattttggttCCTTGAT
GGTGAAGGAGAAACGAAAtgttttacttaaaaaaaagcTTTCGTACTAAA
CTAAGTACACTCTTCGGGCATATTTTGTTTATGTCTTTGAGTATCAAGGA
ACCGCCTGGACGCCTTTCCTTTTTGTTAAAATAGCTTTCGTTAATATCAA
TTGCACTGTATTTTTCTTTCATCGTTAGCCAGCTAACATAACAACAAGCA
ATTCAAAAGAAGTACTGAAAACTTTCAACCGGAGAAGCAAAGGAAAATCA
TGGATGTAtacttttgatgacgtcacttcaGCCGTTAATTTGGTTTCTCT
TCTGTCAGCATTATTGATATTACAAATATTGAGGTACCCATTCTTCTATC
CGGGGAGCATTCCTGTAAACTTCATCTTACGATTCAAAAGGGTACAGGAG
CTAATGAGAAATCTTAATCTATTGATTTTTTCAGACATGACAACAGTCCA
AAACCTCTAAATTAATGACAGAAAACTTTTCATTACAGGATCAAAAACAC
AACGAAAATCGTAATCCACAAGAATTTGATTCTTTCGTTCGCACTCTCAA
TTATATCTCACAAATTTCCAAGATGGTTTTGGAATGGTTTGGAGAGTACT
TCCAACGTAAGACTTGATTATTTTGGAAGACTTAAGGTTGTAGTAAATTA
CCAGAAGAGCCTTTTGAGCCTTTTGAGTGATATTTCAGGAGAATGCTTTC
GAGTAAAATCTTTAAGTTTTCTGTCCGATATCTAAAAGCATATAAAGATT
GAAGCTGAATGAAAACAATCTCAACTGATATTCAAAGACCCCTGAAGGAT
AAGCAAAATATAGCACATTACAATACAAACTTTATTTCCATTTTTCTGCC
TATAGAATGGTTGCATTAGTGTCTTGTTCATATCATATTATACCAAATTG
TGTTTGTTTTCATGGACGACGGTCGAGGGATTGAATCTAGTGATAGTGGT
TGTTCTGGTTTTCAAGTTGAAAAGTAAAGGGTATCCACAAATGTTCTGCT
TTGGTTACGGTACGTTATTTTcttcatgttttgaaaaaagcaCCCCATAA
AGGGCAATTAATCTACAATCTTTTGCAAAATATGTGAGACACTTTTCCAA
AAAGCAACCCCCTCCCCCAAAACAATGTTGTTTATGGAATCAAGCTGTTA
CTGCACTCAACATTGTTTTGGGGGAGGGGGAATCTTAAATTTGCTATATT
TGTAAGGTGTTTCATGATATTTTGCAGAATATTGTAGTAAAGCAAGTCTT
CCTCACCTTTGTGAAAATCTTTGTCACAACCCCCCTTGCAGTGGatccaa
aaagatttttggtgGGGAATATTACTTCGTCTACTTGcctaaatattttt
aactttcgttcactctcattttttttcaggtattcCTTTCTTGGTCACAT
TGCTGGTGGGGGTGATTTTCTTCGATGATTTCAAGACCACAACTGAGTAA
GTCAGAAGACACCATCAATTCATGAATCCTAGATAGTGAGAGATCTTAGG
TATTcttctgttattgatgtttagCCTGTTTAGCATACAGTATCTCTACG
AATTGACAGAAGGTCATTGAGACAAGATGTGTGTTGAAAACGAAATCCCT
ATAAACTTTCGTTCAAGCCATTCTccttttcttctcttttcagTTGTATA
GGTTTCAAGAAGAATGTGTGGATCATCAAAATCCCTGTCATGTGTTACGT
CATCGTaagtgaatgaatgaatgaatgaatgaatgaatgaacgaatGAGT
GAGTAAGTTGGCCAATGAATGAAGGATTTTGTGCTTagataaaaaacttt
tcctaTTTCACTGTGGGCTTTTCGaagttttaatttcaatttcactGTAT
GGTGTATGATATCTCGGGTCCTTGAGGGAAATCTTTTTCGTTCATTTCAG
ACCAATTGCATACTGGTGGGGTTGATTTTCAGCAAGATTCTGTTCCACGA
GAGGAGGAGGGaaagtcaaaacaaaagtaACAAAAGTGACATCAACAGCG
CAAAGTAAGTTTATATTAACCTTTTCGGTATTTAGTGTactagtagaggg
cattttgtaaaatcgctcgactgttttgttagaagcacttgttatacatt
tttgaaaagctaatgggtaggggaatcgaaattactatgtttccaatttt
tgagagaagagagcttcaaaaagcgcaaaaactggacaaaatagctgttt
ctggctgaaaaacacggttttcaagggttaatatctcgagttaggtacag
aaatcacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNaatttcgattcccctaccccttagctttccaaaaatgtataaca
agtgcttctaacaaaacagtcaagcgattccaaaaaatcgaacaaaattc
cccctactactaTACATTATagaatgaatttctttgtattttcttaTTAT
ATTATGtttagcgaccgtagtgcagtggtagagcattcagctacggtgcg
caaggttgtgggttcaacccccagccgggtcataccaaagattcccaaaa
tggtacttgatgtctctctgcttgatgctcagcaattaagataaggatca
agggtaagttgaGCAATTCAGGGAGAAAGAGTAGCGCCCTTCCCTacttt
cgggtagatagctattgaAAGAGGGGCTCCTCCtgcgggtcgcctccgac
tgcagtCGCAGACTTATAAACTTATTAACGCTTAAGTCAGTTGCACTTAC
ACCCGATTAAAACATGGTTATGACTTTTGACTGCTTTAAACCTAAATTTC
CTTTTAGAACCTTACAATCCATTCGAACCCTTTTGATCTTGACATCGCTA
CTgggtctaccatttttgttgacCATCTTTATCGcctatgatgacgtcat
cttaaGCATGTATTTGGTCTTGAATGGACTTGCAGTGAGTATTTAAGCCT
GTAAGAAAATTATGCGGCCAACACATTTACATACATTACTATCAAAGGAG
AGAGATACTAAGAAATaccttgttggaaagataatttaaagttttaatat
ctttaaaatgaaGCAAATGGAGATGACTAATTGAAGTAACAGCGCCTCAA
AGTaggctaaaaatattttatagctacaatcctggccataatatttgaga
caaaagggaaattcccacgaaatcttatgaccacaagtattttggaagcg
ctctaaattaggttagacgaatagagttttaactctgagttttaacatta
gacttaagacttaggaccttagaatctgaggatccaaaagccccagaatg
gtccaacaatgctcagaatatagcctggaagtcaattaaccccacccgaa
tcgaaatactcgaataaatttatcaattagcccaaaaacgactttctcgc
ccgaattccaaattttgaaaaacgaggaaataagctaaattctcaatata
ttttggccagGATTGTAGCTAAGGCATTGTCAACATTTCGCGATGAATAA
AATGGAGCCCTTTTACAAGGTTGGTTGCTGattcaattaattttaaaaat
tcttgtTTTCAGGGGTTATATCTTTTGGTTGGTCAAGTCCTACGCGATGA
AGAGGTTAGGTTTCATTATTTCAAATATGTCCTACGAGATCATTTTACtg
tttaaaaatagaaaaccaAAGCATTATCAATTTTTCAATCTATCACCGTT
TTACAGGTCAAGAAGGAAATACGAAAAAGATTGCTCATTTGGAGAAAGAA
TAAGCGAGATAATGAACAAAGAGCAGACGGTGGAGTGAGACAAACTCCTT
GTTGACATGGAACTATGAGGATAACCTGCACTCAACCTTTGAGGATGAAA
AAAAAGGTGATGATTATAGCACAAAGAGTTTGTTTTTTGGGCAAAATGGT
CGCCATGACTATTTGTTTGAGGCACTTATAATTATCTAACAATTAGGAGT
AACACCTTAACGAAGGAACTTTAGCAAGAAGTCCTGTCTGAATGTGAGTG
ACCTCAGATGAAGAAAAATATGCTTTTGGCATCATGTCACCATAAACACG
GAAAAGTCGGTAACCATGACAACCATAGGAAAACTCTTTGTAAACGAGGT
CGTTGTCAACGAATAGGAGACATTGGTTTGAGAGCAATGACGTCATGAAC
ACCAGCAGCCATGGTAATGGAGGAGTCTCTACAGATTTTATAAATCCATT
GAGAAGTTATGAGGTGCTTGTATTTTAGGGAAGGTACCTGAAGTTTATTT
TTCTGATCAATGGAGGACATTGAGTGTTTAAAATGTAACTTGTTACTGTT
AGCATGATTATCTGATTAATAGTGTAATAGTATTCTGCACACTAACCATT
TTTGCACGTCAGTGAGAAGCCTGGGAACAAGTCACGTGACTGTTTGAGGT
AATTGAATGCGGGGTAGAGTAACGAGTTTCAGCAAACAAAGAAGGCAATT
TAAAAGTTTatgtaaatttcaaaatgggTATAATTATTTGTTGACGTCAT
ATGAGATAACAATGAACATTGCAAAAGTGTATCTTTGGGTACTTTCATCA
CTATAGTATGAACATTTTTAACGACATTTTTGTGAGGGGGTGGAGCTCGT
TTACCCGTTGCCGTGAAAATTGGTCCCAAATTcgaattttccttcaaaaa
gaatattttgaaagtatAAGAGTAAATAAAACGATTTATCAAAGAAGTAC
GCAACGACCATGAAAATCAACAACCACCGCAACCAATGACAGATACAACA
GAGACCAACAAAGAAAATCTACCAGTTACCAGTAAAGTTAAGATTTACTT
ACCATACGCAGGAAAACAAGGAGAGTTGATTACCAATGAACTTAAGAAAA
CTGTTAATAAAATCTTTGATAAAAAGTTAGTGACGCAAGTCACatttaaa
tcaaagaaattgagTTCTTGCTTTAATGTCAAGGACACAACCCAAACGAA
ACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005152TCONS_00005152Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005152-proteinTCONS_00005152-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:660092..665644 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.02	0.06	0.05	0.05	0.06	0.12	0.04	0.11	0.17	0.31	0.21	0.17	0.36	0.31	0.39	0.21	0.29	0.53	0.53	0.41	0.71	1.61	1.44	0.36	0.16	0.02	0.02