XLOC_002972 (gene) - C. hemisphaerica

Overview
NameXLOC_002972
Unique NameXLOC_002972
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000051:641372..651985-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002972 ID=XLOC_002972|Name=XLOC_002972|organism=Clytia hemisphaerica|type=gene|length=10614bp|location=Sequence derived from alignment at sc0000051:641372..651985- (Clytia hemisphaerica)
CTTGTTTGTGTGGTTGAAAGACTGAAAATGAAATTATTTTTGACTGTCTT
AGTGTTGGTCTACACTTTCCAACCCACCGCAATGCAACAGGTAAGGGAAT
TTTTTGACATCATGTTTTGGTTTTATCTTATAATGAAGAAATATTAGCAG
GACAAATTTTGCAAAAAACTGGAGACAAACTGCGAAAGACAATTCAACGT
ATTACTTGTAAAGTCATGTAAAATGTTTTGCTAAAATCTCCTCACTTAAC
CCTTTAGTTTTATCTGAACGACAAGAATCATGGCGCTACTACAATCGTGG
ACGAAAATGGTGAAACAAGAGTAGATTTTAAACTTCACTGCTCTCTCTCC
TCCCTCCCCCAGTGGCAATATTGAAGGGCAGTAATAAGGTCGGAGAGACG
ACTGTTCGCACTCAACATTGCCTTGTTTTCCCGGCATTTTCGAGTGTTTT
TCTCAAACATTTCCATGCGATTGGTCCAAATCTCTCTCTCCTCTAACTAC
CCCTCTCTAACCTTTTTAGGTGTATAAGGATGACAAGAAATCATGGTGCT
ATTATATGACGTTCAATGGTGCATGTCAATGGAATACCCTGGTCCAAACT
AATTGCCCTGGAACCTGCGCAAATAGAGGTACAAGATTGTTTTCTTGCGC
TGAAACTAAAATAGTACTAAACCTATCTGAAGAAGTGGTCAAACTGGGGA
TATCCAGCTTTGCATTGGCGATTTATTTATTTGTATTTCAACAAATATTT
GCTTCTCAAATTCGATCAAGCTTACCTTGGAGGTATTCATATGTTATCCT
TGCGTTTTTAATGGTTTCCACCCCGAAATTCTTTATTGTTTTAAAGTACA
ATGTGCAGGATAGACAAGTGCAAGTTGATATGTTTTTTCATCAACACTGT
TTCACTTGAATTATGACCTTATGTAATCTACAATACGTGTCGGTGGAGAA
AAATCATTGAAAATTTGAACTTTACTGATATTTTGTTGTGTGCTGACACC
AATAGGGTTTGTTCTCGCGCGAGCTCCGCTATAGGAACCATCCCGATAGT
TAACGGGGGCACATAATACGCTTTTTTCGGTAATATAGTATTTGCGTCGA
GCTTGATCTGTTAGGGTCTGATCTTCAGTTCCTCTAAACATTACTGGCTT
TCATTTCTTTCCAGATGTGAAATGTTTCTACATTGAACCAAGGAGAAGGC
GTGATTGCCATGGAAACGACCGCACCTGTGGTATAGGACGATACACAGGT
TGTTGTTGGTCACCTCTAGAGAAACCCGGATCTGGTCCATGGTGTTATCA
TCCTGCAGGTATACATCGCCAGGATATTATAGGGCCCAAGTTTATTGATA
TTAAAAATAAGCTAACAGTATATTCGCGACAGGGTTTATTTATGTTTGCA
TGCTGTCATATTTGTGGCTTTTAGGATAATCTCTTGGAAATGACCTCAAG
GTTGATTTCTCAAAGGGAACCTTTTTGCTAAACATTTCACTAATAATTTC
CAATGCATTGCTATTTTTTAGCTGGCACTGGTCCTAATAAACCAGCTTAC
GGTTGCAGCATTATTCGTGCACTTGACAAGTACGCTCCTTCTGGCTATTA
TTATATCATGAACAACAAGAAGCAAGCCATTCGAACATATTGTCAGATGA
AAGATTATGAAGTCAACTAAATGGATTGCATATCAATAAATTACATGATC
GAAAAAGTAAAACTATTCTTTTCTTTTGGTTTATGTTCTAGAAATTTCCT
TTGATTTTAATCTAGTTTATTTAGATTCTCAAGAAACTTTGCTCCTAGGT
ATAGATTCAGAACGAGACCTTCAATCGCACCAGGTTTAAAGAGATGGACT
ATTTTCTATCTATCTATAAACAGTAAATTTACAAAACGTACCTAATCATT
ACAAAAAATTCTACACTTCGAACTCCTTTTGTTTTGGCAGTTCATTATCT
TTTGATATCGTGTCCTCGTTTTCAATTATCAGTTCGTCATAAGAATTATC
TCCATTATGTAAATTATCTCCACCATATTCTTGGAGTGGAATTACCGTGG
ATGTGTTATTATTTTCTATAACCTCCGTCTTTTTCGGTGGAGCGACACTT
TTCATTTTGAATCGACTACTCGTCGAAGGTTTTGGTTTTGCTTCGGATAT
TAAAGGCTGTCTTGAAGGAGAAGATAAAACGCTTTCACTTTCGTTTATCG
AATCGTTCGGTGAAAAACACCTTTCCGGTGTTTCAATCGAAAACGTCACT
TCTTTTGTTCTTGGTGACTCTAAGTNTACACCTTTCCGGTGTTTCAATCG
AAAACGTTACTTCTTTTGTTTTTGGCGACTCTAAGTTCACTTTCGTTTCA
ATTGGTTCTTTTTGTTTCACGCTTGGTTCTGATTGGTTCTCATCTTGTTT
CTCGGGATCTGATTGGCTCGTTGTCGGTGGTTTAAACAAATCAGCCAATC
GCTTTTCATCTGGCGATGATTGATAACTTTCGATGGAAGAATTCGACTTC
TGTTTATCAAATCGATTAATGGTTTCCGTGACCAGAACTTTCCCCGTCTT
TTTGACGGCTTGAACACGTGAGCTGCCCTTGATATTTTGCAGAACGTCAG
CATAAGGGTGATTTTGCGGATCAAACATATGGTGTTCGTTATCTTGGTCG
GGATGTCGGGACGCAGAGCTCATCGTGCGATGAATGGATGCTTTGCGCTT
CTTCCGACTGTTCTTCTTAAAGATCTTGCCACCGAAGATACCTCCGCTAC
TACTCTCACTCGGTATCAATAAATGATCGATTTTATCGAGTCCTGTATTC
GGCTCAGGTACTACATCGATTTGCGCCGAAACATGGAAGCGGCCCACTGT
GAAATTTCGATTTCGAACAACTTCGAGGTTATTGAAAGTCCAATCATCGA
TTGTTTGAAGTTGAATGTCATCCTCACTCATTCCGTCAAAAGGATCATCC
AATTTATCTTGGACTCCTTGTAGTGCACCGAATACTGCTGCAACGAGTAC
TGCGATGTAGTAAGAACCCCATGCCCCTGCGTTTGATGTTTCTTTCCTTG
ACAGATAGACAAAATAGGGCGATAAGATGATAGGAAGGAACAGAATCAAT
ACTTTGTTGAACGAACGGATGGAGCGAGGAGAGCGATATTCCCTCACTAC
GCGAAGTCTTTCAAAGGATAAACACAGCATATTTAATAAATGAATTACTC
GGGATATGATTGCAGTATTGGAAGGGAGATTGCTCGCTCGCACTCTTTCA
ATCAGCTGGTTTGCATCGCTGAAGTCTTCGTACAAACAACGTGCAATATA
ACGTCTTCGTTCCACTTTGTCTGTCAGTAAATATTCTCTCAAGTTAAACA
TCATATTTTTCACTTTCCCATGCACGGAATCCAACCAATCGTCTTCTAAG
CCCGCTGCAACTTTCCATTCTCGCATGCAGAAAAACCATAGCATTGATGA
TGATTTGAAGTTAGCTAAGTCTTCCAATACCTTTTCTCTCCGTTGAAAGT
CAGTGTTTATTGAGAAAGCGAGCGGGAATACGATAGGTGAAACAAACAGA
CTGACATGGAAATCGAACGAAATGTCAAAATAATCGAAAATATAAACGGA
TAAAGCTGCTAACATCATCTGTAGGATGACCATGAAATTGAAATTAGCAA
TAAAACTTCTGCAAATCGAGATATTGAACGTGTAGAGTAAAAACTTGTTG
TAGTATTTCTTTCTTAGTCCTTGCATTTTCTCCTGTCTGGTGTGACTCCA
TTCTTGGATGACCTCCCGCCCATCTTCCTGGTTCAGGTCCCACTTTTGCT
GGAAATTCATCTTGATTCGAGGTCCCATCTCGCAGCTTGTGTTTTATGTA
CTCTATAAACAAGAAATGAAATGATGAAATAAATCAACCTTCATAACAAA
TTACTTGATTTGATCAAAACAACTTGAACTAATGATTTACTTCGTTCGTA
CATCAGCATTTGAACTTTGTACTGTCAAGATATTGATGTTTACAATCTGG
CAGACCGTTACCGAGGATTTTATATAAATAATGAGTAATTTCTCTTCCGC
GAAAAGTTCCCACATTGCTTTAGTTTGTACACTCTTAAAAACCTATTTCC
TATGCAAATCTGTTACAGAGGGCCTACGTCATCCCTTATGAAAGCCACTC
ATCCCAAAAATCGCTACAAAGTTTGCTATCATTGAAAACACTATAATCTT
TTTCTACCACCGAAAATATATTTTGATATGATACCACCAAAACCATTTTC
CTCCTCTCCTCACATCAAAACATGCGTTAGTTATTTCAGACGCTACTTAT
ATAATTAAACACAAAAATGAACATTCTCTCTTCGTCATAATACCACTAAG
CAAACTACTGCGCACTAACATAATAGGCTTCAAAGCAAAACTTATTAAAA
GTTTTGACACGTGACATCAGCATGATGTTGGAGAGAAAAGATCTCTTATA
TTACAAACAAACCCTTTTCAGAATCGAGGGGAAAAGTTTTCTTTCGCTCA
GTATGCCATATACCTCAAACATATCTCGGGCCTTATTCAATCTCACGCAA
CTTTTCCTGTTCATCGTCCGCCCTCTCGCAATCAGAACCAACATGATTTT
CGTCAAATTCTTCTGATAAGAAATCCCTTATCTTAATCATCACTTGCTTA
TCAATCTCTAAGAAGTCGATCAAAACATCTAATCACGCGCAACACTTTTG
TTTTTAGAAACATGTGGTCTGATACACTATTACCACAAGATGAGCAAGGT
GCAAATTAACTCATCATCCCTTTATTTCCCTCCTTTTTTTACAGTTTTCC
TTCTTACAGGAAGGGAAGAGGTCTCTTTTCTTCGTGTCTGACGATGATGA
TAACGGATTGAACTTTTCCAACAAAGAAACTTCTCAAGTCTCAATCCCCG
AATCTTTTTATATTTACTCGCAGACTTGAAATTGATATGATGTTATGCAA
ACAAATCATGAAAGCTTGATGACAAATTGCGAAATGTTATAATTGCACCC
AAACCCTACTCATCTAGCTGCCATGGCAACCGTTTAACGGTTATCGCTCA
GAGATACTCACATCAAAACAGGATGCTGCCTATCTCAACCCTTTGTATCT
TGTATTTCAATAAAAAGCATGACATCTCATTAAATTCGCCGTTGCAGGAC
TTCAAAGGACGTTGATATGTTTGCCAAACCTCATCATGACATCAAAAGTC
CCACCAATAACAGCCAAAGCAACGGTATCGGAAATTGCTTTTCAAATGAA
TTCTGTCGACGTGAAATCATTTCTGCAGCAACTCCTGATACAAGAAAGCT
TACACAAAGGGAGCTAAACAATAAACGAACACTTAAAGCAGGACCTTCTT
TAACATTTAAAATGTTCAAAATTTTCACCAAAGCAAATGCCAGTCATCCC
AAAGCATACTTTTACTTGATTGATGATATATCTACTTCACTATTTATAAC
TCTTAACCTTGATCCTTGAACCCCAGAAGTATTTTGTTGTTGTGGCGGTC
AAGTTCAACGCAAAAGAACATCTTCTATTTAAGCAGCAAGCACTGTTCAG
GGGGGGGGGTTTGTAGGGGTTCGAAATACCGTTTTCCCGTTAAAATTTTT
GCTGAATCCCGGAATCCCGAAAATTGAAAAAAATAATAACAATGTCACAC
CGGTTTGTACAGGTTCAAATACCGGCATAATGACAAAAAATAAGGCCAAA
TACCGTTTTCCCGTCTTTTTTTCGTCAAATCCCGTAATACCGTACTAAAA
AAGGGCCAATCCCGTCATACCGTAAAAGTACAAACCCCCCCCCCCTGTTC
ACTGACCTAGGGAGAAAATAAAGAACATTATGTTACACATAAGAGATATA
TTTCATTTTTCCTTGCATGACATCTGTATTTAAAGCAATAAGCCCTTATG
CTGAAAGAAAATTCGCTTAACCAAACCTATCTCAAAGATTCCTTCAATTT
TCCTCATTGCTTGTTCATATGACCTGAAATATCCGAGATAAATTCATGAA
TAAACATTATCAAAATTGTGTCGAAAGAAAAAGAAACTGAGAATGAAAAA
ACAAAGAGCATTTTTTGGGCTCAATAATATCTGTTCCCCATTCATTCATT
CATCCATTCATTGGTTTATTGAATATTTGATGTTTTCTTTTGATAAGGAA
TCGAAAGTGTGAAAGGATGATCAATAATTCAACCAAAGTGTTTTGATTGA
AAGCCACCTGCTTAGTTCAAAAATTGATGAGGAGATCTTTCTTTCAAAAT
CTTCTTCTTTTCACACGTGGTCCATGTCCTTCCCTCGTTTTCTGAAGACA
CCCCAGTTTCATCTTTTCAAGCAGCAGAATATCGCAATGTATTCACTTCC
TCAAACTGGAGTAAAATTTGACGTGATGATTAGATAATCAACCCTCAGTT
CCTAGTTCCCATTCAGAAACTAATCTGGCTTTCTGAAACTAAACGAACAT
GCCCCAGAACTGTGAATCAACATCCCATCAATATGCAGGTCACCAAGCCC
TCTTTTCTGAAAATCTTTCTGTTTTGACTTCAGAACACCAGAACCTTCTC
AGCTGAAGTAAAGGTTAAATGTAAAGCCGCTGAGAAAATTTCGTTGAAGT
ACTGTTAAATGACACAACCTTTTTTTAAACGGAAGCAAGTTTGTAACAAA
GTTGAAACCGTTAGATGTATAAAGTAAGATTATTGATGAACAAAAATTTT
TTCCATTTAAAAAAGATGTACAATATTTATGAAATTACTCACCGAAAAGC
ATCGCATTGTCATCGTGATGACGTCATCAAATCTAATTACTTAATGTTTT
TTGTCTCGTCATAAAAAAGATCGAGCACCCTCTCGTTGTTGATGAGTCTC
TAAAATGACGTCAAATGATCAGCAGAAAATATTCTAAATGCGTCTGCAGA
AAACCGTTGCAAATAATAAATAATAATGTGGCATTCCGGAGGTAAAACGT
ATTGGATGAATCCTCTCAGTATTCCAAGCTAATTGTTACCGTTAGAAAAG
GCTCAACTTCAACGCAAATTTATAGCAGAAATGAAACGAATTGATATGTC
ACTTACTAACTCTTTGGTGGTTTTGCTGCCACAACTCGGTATTTATTTCC
AAGCATTGCCATGATACTCGAGACAAAAGGGTAATTCCCCGCAAAACTTT
AAAACCGCAAACAATTTTTCAGTGCTGCAACTTACTTCGGGAAAGTACAA
TTAGAATACACCTTTCCCGAGTTTATTTCGACTTTTTGAAAAACACTATT
CCAAAACCCTGCTCTACTTGCATTTAATTTAGAAAGATTTTACTACGAAA
TACAAAATCAACAAAAAAAGAATTATACATCCCTGTGTCACAGACCCGCT
GGGACCCCAGCCCCGCTGGAAGATTCGGCCAGAATCTTGTCCCCGGTGGG
AAGAATACCCTACAATTTCACCCCACTGGGGAATCGACTTTGATTTCATG
CCCNCATCCCCGGAGAACACCCTGCAATTTCATCCACACTGGGGAATCAA
CTTTGATTTCATCCCCATTCAAAATTCAAAGTAAAAAATTGCACTCCAAA
ACCATCTCCACCGAATTTTTCGACTTAGGAACAATAGAATGTTTATTCCC
GTTGGTTATTCAGTAGAACATTTTATCCCCACTGTGGGAAAAAGTTTCAC
CGGGGCTTGTGAGACAGGGGTGTAATACGCGTATCTCCTATTAGCGGATT
CATGTAAAAGAGTCACGAAAAACGTCGAGAAAGTCTCTCATTGGCTGAAA
TATTGCACATACAAGCATATTTTTCAAAATGTCCAGAGTATGAGGTAATC
TTTGCATGCCTCCGCCAATCAAAAGTTTGTTTACTCGACGTTTTTTCGTG
ACTTTTGCATGAATCTGCTAATAGGAAATAGGTGTAATTATGTTAAAAGC
TCTTCCGCTTCTGGAGATCAATTTTAAAGTTTTTTTTAAACAAAAGTATC
CCATAGAAACGGAATAGAAACGACGCCCAAAATGAAATAAAGTGGATATG
CTGAAATCGCCATATTTAGATGAACTTATTTTTTTTGGAAATACGTCGTT
AGTTTGGGGGGGGGTTAGTTTGGAAGTTCTTTGGGGGGGCGTCACTCTCA
TTGTGGAAATACGTCGAAATATGGTCTAATACATTTTGACCATGATTGTA
ATTCGGACCTTGTGAAAGCGCCTTTAAACATCCAAACCCTGTTACCCTTC
GTTTCCCATTTTACTTCTTTCAGAAGACGTGGTTGTCTGGCTATAGGGCA
TTATCGGGGAATTGCCTTTTTAAGAGAACTTTTTCTAATATTCTTCAAAA
CCTAAACTCTAATGTCAAGTAAAAATGAATATAAAAATGGTATTCTTTGT
ATATACAAACAAGGTGGTATTTGGAAAAGAAATTTATTAATAAACTAATT
TTTTGTGGTTTTGATACCACCGTCAAAAAGATGTGAACTGTGAGGAAGAA
ATTTTTTCAGACTCGTTCAGACTTGAAAGGTTTTGAATAAGTAGGTTACT
ACGGTTTGTCGGGTTAAGAAATCCAAAATCCTTTGCTTGCAAGTGAAGTA
CAACAAGAAACAAGTGAAAATTCTCACAAGGAGCATACCTTCTCAAAATT
CAAAATTACCGCTCAAAAACATTCCAAATAAAGGACTTAGGTCAACTAAG
AAATTCAAAAAAATATCTAAGCGAAGACATTGTCTTCTTTAGTTGGAGGG
CTGGAATCCACAATGACTTGCGTTAGTTCATCATCAGCGCTATTCACGCT
CATAGAGGGTACTACACTCTTATGAAATCGTGCCCCGTTTTTCAAAGGTG
ACATTTCGAGTTTCGTCGTTTTGAAGCGATTGTCCTGTTCTTCTTTCTCT
TTTTCTTCATTTAGAAGAGGTAGCCGACTGTTGGAACCACTGTTCAAACT
ATTTCGTTCGTCATAAGTGAATAACTCAGTCTCGTTTTGAAACTTTACAC
CCAAACTCTTTCGATGTTCACCTGTATCTGAGTCTTGGTCATTTTCGTTT
TTGAGAATCGTGTTTAAAGAAGCTTCGGAGACGCTTTTCCGTTGAAGGTC
CGTATCTTTCGGTGTGGGATGCGGCTCATGACTTTGTTGCCGTGCTGCGA
TCGGGTGGTGACGTACTGTGTGTTTACGTTCAATACGACTGTCACCTGAC
ATCTTCTCAAGAACTTCTGCATACGGGTGATTTTCAGGGGCCCACGCTTG
TGAAGTTGTCGAACTGAACCTTTTACGTCCTTCCTTCCATTTATCAGAGC
CGGTAAACGTCTGACTTCGAACGACCGCGCGTCTCTTTGATTTTTGATTA
AAACTTTTTCTGAAAAGGCTTTTCCCTGTTTTCCGATTATTAAACGGGCT
TTTCGACGCTTTCAGAATTGGAGCTTCATAGTCAGACTCCGGGCATTCTT
CAGCTTCTAACTCGTGTAACATTTGAACAATACTCTTCGATCGTGGTTTC
TCGGTCTGTTCTTTCTTCACTTGAAATCTACCAATAGTATAAATGCTTCT
CTCGGCAGCTGACTTCAAGGAGTTGAAAGTCCATTCATCAATTGTGTCCA
AGTTTATATCGTCCTCTGACATTCCATCAAAAGGGTCGTCCAATTTGTCT
TGGACTCCTTGTAGTGCACCGAATACTGTTGCAACGAGCACTGCGATGTA
GTAAGGCCCCCAGTTTCCGATGCTAATCTCCTTCTTACCCAATCGTCCCA
AATAAACGAAATATGGGCAAAGGATTATGGGTAAAAGTAAAATTAACACT
TTGTTGAAAGATCGAATGGATCTTGGAGATCGATATTCTCGAATGACTCG
TAAACGTTCGAATGACAGACATAACATGTTCAATAAATGTACGGACCTTG
ATACAATGGCAGGATTGGCGGGTAATTTGCTGGCGCGAACTTTCTCGATC
AATTGTGAAATATCACTGAAGTCCTCATACATTATGCGTGCTATAATGTC
ACGTCTTTTCATTTTATCTGTCAATAAATATTCTCTCAAGTTGAACATCA
TACTATGGACCTTTTGTTTGATGTCTTTTAACCAAGCTTCCTCCAAACCT
GAAGCACTTCTCCATTCCCTCATACAAAAGAAGAAAACCATGGATGAAGA
TTTAAAGTTAGCTAAATCGTCCAATACCTTTTCTCTCCGTTGAAAGTCAG
TGTTTATTGAGAAAGCCAGAGGAAATACGATGGGTGAAACAAACAGTCCG
ATATGGAAATTGAAATAAATGTCAAAATAATCGAACAACCAAACGGCACC
AGCAGCTAAGATCATCTGAAGGATCACCATGAAATTGAAATTCTCAATGA
AACTTTTCAATGTTGTTAAATGGAATGAATACACCAAAAAGCTCATGTAC
GATTTTCGTAATCCGTGCATTTTCTTGATGCGGTCGCGCGACCATTTATG
AATGATGTGGCGGTCGTCTGATTCTTCGTCATCGTTGAATTCCCACTTAT
AAAACTCCTTCATGTTGAAGAGACTTGCGGATTCGGTGATACCAAGTGTT
TTGCCAGTCATCCTATCAAGAAACAAATACATTTTGTTCAGTACCAAACN
AGATTCGGTGATACCAAGGGTTTTGCCAGTCATCCTATCAAGAAATAAAT
ACATTTTGTTCAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005230TCONS_00005230Clytia hemisphaericatranscript
TCONS_00005229TCONS_00005229Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:641372..651985 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.02	0	0.86	0.67	6.62	5.54	3.66	7.44	3.53	6.09	15.88	17.53	21.17	27.93	10.72	13.63	13.16	11.63	4.14	4.39	2.36	2.5	5.1	5.44	3.78	2.95	1.33	0.78