XLOC_002973 (gene) - C. hemisphaerica

Overview
NameXLOC_002973
Unique NameXLOC_002973
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000051:673943..679158-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002973 ID=XLOC_002973|Name=XLOC_002973|organism=Clytia hemisphaerica|type=gene|length=5216bp|location=Sequence derived from alignment at sc0000051:673943..679158- (Clytia hemisphaerica)
TTAGACGTCAATTCTAAGGACGAGAGAAAGGAGGATGGAGCCGGAAATGG TAAGAGTTTAGTGTTTTATTTAATTTATCTTTAAACTGAGAAACATGGAA GTAGTTGAAACTCCGCTGAATTGGCACTGTCACTTTATTCTCACTTGCTG ATTGCTTAATCTATGTTTGCCCTTTATTGCAGATATTACTTGAAGTAAAA AATTAACCTCGTCTTTCTTTGTTTTTTGCTCTTCAGTCTTTTGCGGTGAC ACTACTGTGAGTGTGTTTTATTCCTTCTTTTTTAGATTTGAGCCATGGAG AGGAGGCGAAGGATAAAGAGAAGAACAAAACGAGTGTCTTTTACATGGCT GTTGGAGTGATCTTCAGTTTGTTGTTACTGATTGCCACAGCTGTTTGTTT TCTTCACATACGAGCTATCCCAAAGAATGAGGACGAAAACTTGTTATTAA ACCAAGTGTAAGATCGCAAATCCTTATCCTTAAAAATATCTCTCTGCTGC TTATTTTTCTGTTTATTCTTCCTTTTTATTAACTTTCTTCAATCTCCTTG CTCTTAACACTGACTACTTCATATTTTTCTTTCCCAGCGATGGAAGTGTT CACAACAGTACAGCTGGTGTTAACCATCCCCCACAGAAATCCACTGCAAT TCCTGAAGCTCTTCGTAAGGTCAGAGGTAAGAGTGGCTTTGTCTCACGTT TTAATAAAATCTTCAAAAATTAGATTACTGCAGTACATTAAAAACATGAA TTTTGAAGAGTAGAAGCCCGACTGCTGCGCTTATTTTCAATGTTTTTGAT TTTAAGATTACTGTTTGTTCATTACATTATATTCTGATATTATTTTCCTC CACAGCGGAACAGCAACTAAAGGAAATGTTATACAATATGAAAGACTTTG CTGTGCGTCGCCATTTTGTCTCCATTGGTAACGCCATGCAAGAGGGTTCG TTCGGCCGCATGTTCATGGGCACGTTGGTCAGTGCGGAGAGTGGCGAAGA ATTCAAAGTCATTATCAAAACTGTCACTGGTAAAAGATGAAATTAATTAT TTCAGTATCAAATATAAATCTTTTATTACAAATTTCTTCACTCAGAACTA ATCCAATCCATTGTTCATTTTTTATGTCCGTCGATTCCTTTCCATAACTT TGACTGCAGTAGGTTGACATCTACAGATTTTAAAGATATTACAGATTCCA CTATTAGGTTACATCACAATAAAACATTTTACCATTTTAAACAACGTTCT CTTCTTTGTGTTTTCCAGAGCAAGCATCGACAGAGCAACTTTTGTTATTT CTGGCAGAGGCGTGTATGTTGAAACGTACCACACACCATCAAGTATCTTC ACCCATCAATATTTGTTCTGATGGGCCAACACCTCTTGTCATTTATCCCT TCATGAACAGAGGCAATTTAAAGAACTACCTTCGTCTCACAAGGACGGCC GAACCACTGTCAAGGGTAAATTTGTTGTTAGTCATCTTATCAGGAGAAAA AGTCTGAGAAAAGGACTATATTTATGAGAGAGAGAGAGAGAGCCACACGA TTTTTACTCTATGTAAGATTTTCCTACTCTTTTAATAGTTTTCAATTTTC TTCAAGAGCTGTTATGCTTTAAGTTAAATAATCTTCGCCTAACCAGAACG GCTAAACTACTGCCAAGGGTAACTTCTTGTTGCTTTACACTGGTACACTG GTCTAAATGCGTGATGACTGTTCCTAAAAAATCAAAATCAATGCACACAA AACAACGTTACTAAAAAATTGTTCCAAGGGGTGATGATATTTATGTACCT TATTACACGAATATTACTAGTCATTTTATTAACACGAATTGAAAAATTTC TTTTTAATAAAAACCCCTTAATTAAAAACAGAAAAATTCGTGTTAATTTC AGATCGTGCAAATTTCAAGGCCGTTGAATACTTGCTTGGTAATCTAATAT TCGTGTAATAAGGTATCTAATTTTTTTGTTTTTCAGCCACTGACAACCAG AGACATAGTGAATATCGCATCACAATTGGCCCGCGGGTTGAATTATTTGA GTAGAAGAAGACTTATTCACAAAGATGTAGCTACAAGAAATTGCGTGTAA GCATCCACCTTCTAATTTTCCCCTGGTTCCTTAAGCTTTACTCTTGAGGT TGTATGCTTCTCTTTAGAAGACGATAGCTTCTGTACTATATTGCCTTATT CAGTCCCTCTTAGTCCGAAACAATTTTTTACTCGGACTTGATCGAGACTA CAGTTTTCAAATTGGAGTAAGGTAAGGAAGTAACTAAGTTGAGGAATGAA AACATTGGAACCGATCAGATCCCCCACAATTTTTCAAGTTTGAGTAGGCT CGAGTTAACCGAACTTCCGAATTTTAAGAAGTGAGTCAGTCTTAAGTTGT TTCCTCAATCGAACTTGTCGAACTAGTGGAACTTGTCGAACTTTCTCGAA GTGAACAATTTGTTATGTTTTTGTTAAGTTCGACATACGAGTCAGATCGA ATAAGTCTGAGTTTTTTGATTTTTGAACGAGTTCGAGTAAAATCAAAAGG CCTTTTCAACAACAAATTGTATTAGTAGCGGGTGGTAGGTGAATTACTAT CTCTCAATTCAGACGAAGAAGTCTCGCAAAACTTTCTTTGTTTTCTACCA AAAAGAGGTTTGGGATCTAGGTTGAGTGTCTGATGAGTTTGTGTGTGGTT GACAGTTTGATTCGTTAATCAAATGAAAGCGTTTTACTTGTGGTTTTGAA GTGGAAGAGCAAATGCAATTACTCATCACCAATATCCTGACCACAACCAA TTTCCATCTTTCCATGTCCTAACGCACTAAAACAAAAACGTCAGACACGT AGTAGCAACCAACCCTTTCGAAATCTTCATGGGATTTATTGAAACAATAT TTACAGGAGATTTACCAATATATTTTGACCACCTTTCTTAATTGGATGCA AACTTTTCTTCATATTTATAATGAGACTTCCGCCCGTTTCTACAGTGAGG TCACGTGCCACTTCTAGATTTTGCTTTGGTGAAATTTACGTTTCAGTTGG TTCCAATCAATGACTTCATAAAGTCATTTAGGACAACAAATGTTCAATAA CAATAATAAAAAACAAAAGGGTATAATGAAAACATATTCAAATGGGAACT AGACTTTTTAAGGAAAACAAAAGCAATAAATTAAACGAGTATTCTAAGTA GCCATGGTACAAATATTGCTTCATATTATGTTCAATTTCCCTCAACTGTT ACTTCAAATTGGTTTCTTTAAATTACTTTAAGGTGTTTCCATTCTCATCC CCATACCCTCTTTTTATTTCCCAGGGTTGACGAAGAGTTGAACGTGAAGA TCGCTGACAATGCTTTATCACGTGATTTCTTCCCTGGTGATTATCATTGT TTGGGTGATAACGAGAATCGGCCGGTGCGTTGGATGGCTACCGAGTGTTT AGAATGCTTCGAATATTCTCCAGCCTCCGATGTCGTAAGTCTTTATCTCA ATTTTCTGGTGGATAAATTCAAATATGCTAGTGAACCAAAGTAATCCTAT TCGTGGTTTGCTAGAAAAGGGTCAGTCTAACGACTGACTACACTCCTGTA GCCTTTCTTGATGTTAAATGTAGGCTACATGCGTAAAAAGCTTAGCGATT CAAAGCAGGAATTCAGTTTAAGAAGTTCTGGAAGTTTTTTTTTTACCACT CTCAATTTCTTTTTTACCACTCAATTTCTTTTTATCCCATTTAATTTTTG AATCAAAAAAAATATTTCCATCACTTTTTGAAAATACATAACTTGGTCAC CTGCGTTACGTAAATTAGTCAACTTCGATATCTGTGGTCCATTGTTAAAA GAGGTAAACAGAGTATTCTGGTGACGTTGGAAAGTTTCAAACTATCTCTC GATGGAAGAATTGCATCAATAACAAAATTTGGCAAAGCTTTGGTTTCCGT TATGCTTCCCTTCGACTTCCTCGCTCTCGCTTTGATCTTTTGATACTCTC GCCTTCTCTCACACGCATCTAACTGTATCTGCACTCTGCAATGCAATTCT TCTCTAAATCTTAAATGAGAAATCACCAAAGGGCCGCCACGTGCACAAAT TTTCATTTCCTAAAACTTTCTAAAAAAGAGTCGTTTATTAGTTTGTGATT TGTGTTTTGACCAAACGCGTTCTTTTTGAAGTCTTTCTTTCGCCACATTT TTTAATAATGATTTCAGTCGTCAGTTGTTTTGTTATCTTGATGCATGCGG TCGGCGCGTCTGGCTCATCATCTAGCGGACGAAATTTCATTCATGAAAAG TCCATTAAAAGCGTAACCAGAGTGCCACATTTATTTCCAAAAATACAGCA CTCCTTTAGTTAGTGTATTAGTGTTATGTTTTGGATTCGTCAGAGACAAC TGTAGAATTCAACTGAAAGTGTAGTTTTGACAATAAGTGAAGAATGAACT CTTACATAAACCATTTCACGGGCGTACCATTCGGGCACACCATATAATAA TCATAGGACGTTAGATAGACGTCGTTTTGGCGTCTTGTACGTACCAACAA TGATTATTCGAATCTATGGGGAAACCCTTTTCTTTTTTTAGTGGAGTTAT GGGGTGTTGCTATGGGAACTGTGTTCGTTAGCGCAAACGCCATACGCTAG CGTCGATCCTTTCGAAATGTTGACGTATCTCAAGTCCGGGTTGAGATTAC CACAACCGGAAAATTGCCCGGACGATTTTTTTACCGTGATGGCGTGCTGC TGGGCACTGTCACCTGATGACCGCCCTCACTTTCAACAAATTATGGTGTG TTTGGATGCCTTCTTGCAAAAGCTGAACGCCTTCATTTGAACGGAAAACA TTGTCCGAGACTGTCCGAATTATAGAAAGGATATTGAAGGCTTTATCATC TTGAAATTGCGCAAGAAAGTCAATTCAATAAAACGGAGATTTCGGAGGAA ACAAATCAGTCATTGATTGCTTCTTTATTTTTTTTTTAATTGTAAATTCT TTAACCTTTTTGTATTTATAACATATTTTATTTTTTAAGTTTTTCCATTT TGTATTTTAAATACCATACAAATATAAGTATAAAAGATTGAATGAATCAA ATTGACCACTTCCAACGTGATATTTTAATGCTATCAAAGGTTCCTTCTCT TGAACTAACTGAGCAATCGTTACTCAATTTCCTGGACAGATATGTTCGAG CCAAAAATCGAAAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005231TCONS_00005231Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005231-proteinTCONS_00005231-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:673943..679158 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
STYK1tyrosine-protein kinase STYK1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.38 9.9 11.72 13.57 30.2 20.36 18.02 17.18 17.82 22.48 17.91 17.22 12.5 14.75 12.89 14.11 14.53 18.33 12.75 14.32 11.62 11.35 28.36 25.21 9.56 9.7 11.42 9.99 22.01 22.45