XLOC_003098 (gene) - C. hemisphaerica

Overview
NameXLOC_003098
Unique NameXLOC_003098
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000053:732116..738544+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003098 ID=XLOC_003098|Name=XLOC_003098|organism=Clytia hemisphaerica|type=gene|length=6429bp|location=Sequence derived from alignment at sc0000053:732116..738544+ (Clytia hemisphaerica)
TAAAAAAGTACGACTTGATTATGGATATCAGAGGTATGGCTGATTGATAT TgataatgagatttttttcaattacgTTAATCATTTGGTCCTAGGAACTC ATTTAAATTTCATCAGATTTCATAGATAATTATAGTTTTAAAGTATTGTG TCGTTTCATTAGACGACTTGCATGATAAAGTTGCACACTACTCGATTTTG ACTTgtcagaaattttttaaaggGTATTTCCAAATTATTCTTTTTATGTT TCCTCTTTCGAAGACATTTTTACTGGTCCCTTTGTGTTTCAACAATGTAG TTAATAGCGAGTTGATGTCTGTTTTTCTATGACCGAAACAGTTAGTTTCT AAATTGACTACATCCTGAATGGTTGAGGACGGCGATAAacaagcactttt accgtcctcgattttgcgggtcaaaattGCGGGTTATACCAAGTCGCTTC GGTCACTCCGCCGTCCTCAAAACTTCAAATATATAAACAGATGATTTCTT TAtcaatacttaaagtttcatgctCTTCGCAATCATCAGTTGATTTGAAA TATGACAATACGAAACTGGCTATTATGTGCGACGTACGTGTGCTGTTTAG AAGAATTATCTTTGTATTGTCTGTTAGTCTTTATTCTGATATTGATCATA GAAACGCATGGATTTTTTGATAACTTCCTCATTAAGTATTACCGCTGTAT TTcataacaaattatataatTAATTCTCTTACTTTCAGGGGAaacacaaa aatacaaaaaaaacaaaaaactcaaagtcaaaaactcaaaatttcacGTC GAAAATACTCCGTATAATTATCCTCTCTTcactaaaaattctttaaactt tgaaaaacaacACAATATGGATGCGTCATTGAAACGAAGAAGCCCCTCAT TGGACGAAGTTCAACCTAAAAGATCACGGTCAAACGTAGACGAACGTGAA TTAACACAATCATGCGTGGCTGGATCACGTAAAAGTCCCGTAagtataaa ttttattttgtaaaaaagccTACCAGCTAGAGCTCTCTATATTTCGATCT CCAAGGGGCTACGAATTTTCTTTGAGCTAGAGGATTAATTGGGGCATTTG TTCGATTTTCCAGTCAAGTTGACCTTTTCTTCAAGCCCAAATGCAGAAAG ATTTCAAGGCTTGGAGACACGATAACTTTTTTCACGTTGgtacaatgcaa catgctccatcccaacaacctgaaacgctttctcgttagtccaaaaaaag aaaccaccggacacgcacttttttcttgAGTTGGTTGGATGGAGCaggtt gcattgcaccaacgcgaaaaaaacttctcatgCCCCCATAATCTTTAAGA GGTTTTTTTAGGGAGGGAGTTGGCTGTATTCTTAAAGTTGACgaggtttt tgtttttaaggGAAAAGTTTCCTTTGTAAACGTTTAAGATAAGAACGACC TCATTAAGAAACGATTTCAAACAAATTACAACCTCTGTCCAATTATGAAT TCCATTTTTGAGATGCAGGCTACTATATGCTTTTAAATCTTCGAGGCATA CATGAGCTTATTCAATCTATTTTCAATCTCAGCGAACAATAGCCGTCATA TTAACACCAATAAATTTTTGATCCTTTAATTTAATTATCAAACGCTCAGA TCTATTGAATATGGATTTTTTGTCATCGATTTGTAACTAACCTTTTGTTA TCAATTTGTATCCTTTCGTTCCAAAGTCAAGAGCGACTTCTGTTCTGGTG ATTAGTTGTCGATTTCCTGAATGAATTTCCTTTATAATTAGTCAACAGTA TTGATTGCCGAAAAAGGAACTCTTTTTTTAATTAgcaattttctgtaaaa attgTACGTTTTCTCATCCCAAAAAGATTACCTTCACTATTAGCTGccat ttgaaatgtttttcatgTAAATCATAAATGAAGACGAGCTTGTCCGTGTT TTAAATcccttttaaattttcattttatattctCTAGTTGGCTGTTACAC AAACCAATACTATTGTAGCGGCTTTGAAGAAAATACACCCTGACTATGAT TTCCCAATTGGTAAGCTTTCtgctttcttgattttcttgtgTCATTGTGT TACCAACTATTCTATCTTTTGAGAGAAACAGTAgactcgcttattcgaac ttctattattcgaatacAATAATTCGAATAcaataattcgaactaattct ctGCTACAACGTCAAGGGGGGGGGGACCCATCGTAAAATATtatctataa ttcgaatctctctgtaattcgaacaaataagattccccgttgGAATTCGA ATTGGCCTGAGTTTACTGTATATCATATTTTCCATCATGACTGCTCAATA TAATGCATACCGCCTACATGACCAGAACAGGATAATTTTTGTCTACATCG AAACCAAAACCGATGTCTGCGTGGTCGAAAGCAGTGAATTATTAGTCTCT GCATATTAAAATTATCTTGTAACTATCTATTTTCGTTCCTCTATTACCTT ATCAATCAACCTCCTAACTCTTAATATTCGTTTTATAATTAAATCATAGT TTCGTCTGTACTAATACCACATGTCCTTCCCTTAAACGTGTTCCGTTTGG CTTCCGCATCGACGCTCTTAATTGCTTTGTTTTTTCTATTCATCTACTAT TTTTCTTACAAGAACCATTATTTATTTCTTTAGAAACAATGCAAACACTT GGCGATAGAATTTTACATTTGGCATTACCAAAGGTTAGCCAGTTATCTTT TGTGTTTCTTTACCATTCAATGTAACCCTGGATTTTACTCAGGCCACATC ATTCCCCAgaaaaaaagcattaaaatctcCCTGGCACCTTAGCAACGATT ACGTATAAAAAAATGAGGTGCTTTATAAAGTATCATGTGCTAGCAAGCCT ACTGCTGTTTTTTCGTAGTCACGAAATGACCTGGATTTGTATGACACCAA TGTgccacagacccactggaaaaattggcaaaaatttcgtcttcAGTGGG AAAAAACCCtgtaatttcagccccactgggaaattgactttgattccgTC CCcatttcgaaattcaatgtttaaaaattgcactctaataACCATCCCca cttttatccccactgaggaaaaaagttccaccggggctgtgagacagggg tgtcgtATGGAAATTTCTAATGGACCTCGGTTCCTTTTATTTTTACGTAG ATTGGTCAAAAAGGACTTTTCACAAAAGACTTGGAAAACGCCTTGAACGA AAAACGTGTAGATTTCTTGGTGCACTCTCTAAAAGATTTGCCAACTAAAA TGCCTGAAGGAATGGCCCTCGGATGTGTCTTCAAGTAAGTGTTATTCTGA AATGCACAATTTCAAATATTATTGCAAAAATATGTACACTGAGACAATGT CACATTAGTTGCGTGGAGTTAAGTGAAATATCTGTCACTTTTGCCACAGG CTTTTCATCTTGGCACCAAGAATGGATTCGACCAGGCGATGTCAACTGAA CTTTCATTGAACTAATCAAACGATAACTGTTTAAACAGTATAATAGTTTA AAATTAAGTGACAATTTAGTTTTCTCTGTTACAAAATAGAGTTTTTAATT CTCGAGTCAtcctttaaaaatttttctgctatatatttttctttagaCGC GATAACCCTTTTGATTGCGTTATATTCCACTCCAAACATGTTGGAAAGAA ATTGGAAGACTTGGCGCCAAACAGGTAAGAAGGAAGGAAATCTTATGAGG CTGATTTGACAAGGCCATTCGTTCAAAGTTATAGTAGGCACTCCCAAAGA TAAACAATCTCAATTCGCTGGCACCTTTTTAATTCCGATGGTGTCTGCTA ATGGAAATCTATGCATTGTACAATCTTTTAGGATTCTGATAGTCTTGTTA CAATACAGCACGCtagaaaaaaattctgaaaatataaaGGAAACTTTGTG ACACTTTTTGCTCTAGGATATAGTCCAACAATCTTATTCCTCTTTCAGTC TCATCAGAAGAGCAGAGATTACTTCTATAGTTCGAATATTTCTGTAACTC GACAAAATTGAGAGTTCCTAGTAATCGAATCAGCGAGAGTTAACAGTAAA ACTTAGTCTTACAATCTTATTCCTCTTTCATCAGCGTCATCGGAACAAGT TCATTGCGTCGTGTGGCACAACTAAAGCGAAAATACCCAACTCTCATTTT CCAAAGTGTCAGAGGGAACTTGAACACTCGGTTACGAAAACTCGAGGAAG ATGGAGTTTATGATGCTATCATTCTTGCCAAAGCTGGCATTGACCGTATG AATTGGACAGAGAAAATTGGGCAGATCCTGGAAGAGGAAATTGCTTATGC TGTAGGACAGGTATCatcttatgttttttttcagttttggttTGATCCTG ATCCCTTTCGTTCCAATTTTTTGTCTGTTTGTCTGTAGTTTAGTCAGATA TTCTGGAATATTCATTCACTCGCACAAACAccttttaaaaaacttaaaat attgATAACACGTAATATGCGATACACACGGAAGCTTTCTCGCGGACAAG GATGAATTAATTCAATTCACATAATAAAATGTGTATAGGTTAATCACCCC CTGCACATGCACATAACCTTCAAAGAATCGTCCCGTAGCATCCaagtttt tttcctgatttctgCACAAATCCCCAAAGATTTCCAAGGTCAATCTAAAG ACTTCAAAAGTTCAAGAGTCAAGCCAAGACCTAAATCAGCAGAGATTATC AAAAGTGTTTATCAAAAGACTACATGAAAGGATTTcgaagattttctttt attcaaaagaTTTCCAAGTAAGATCTGTTTAGTTCTAAATATCAGTTTTA AAGTTCTACTATATCTTGATACATTTTGATACAGTTCAAGTCTCCATTAC TCGAACCCGCACGTGgaatacaaatttgttcgagttatcgAGTAAGGTCT GAAAAGACATTATTAACCGAAGGGACGagcagggtcggatacaggaggta ggctatcttattcatggagagtataATTAGTTTCCattataaggtaatac gataataaagtgcactctcctccattggttaaagcatccctctgtatccg agcctggacgagaaaacttgttctaGTTaatgagatatttgagttataga agttcgagttagagactctactgtattaaGAAATCGGAACTTTTGTCGAA TACTTACTCAAAACTAACAATTTCTAATATTCGACCATTTTCTTCTCAGG GAGCAATGGCTGTTGAGATTCGAGACGATGATCAATTTATGATGAAAGTT CTCAGTAAGATTACAGATATGAAGACGATGTTGACGGTGATAGCTGAACG TGCGTTCATGAGGAAGTTGGATGGTGGTTGCAGTACACCAGTCGGTTGTA ATGTTACTTACGAAGATGGAATGGTAAGCTTTTGCACTCCTTTCTGATTT TACATTCTCACGTGCAGATATCTTGCATTTACATTTTTTGATATTAAAAC AGTTACCTGTATGCGAGTGGCCACTCAGACAACTCCTTGTTTATCCTAAG TCTATGAATTATGCCCTATCATAGGATGATACAAATTCTTCAATGCGCAT AATCTGGGCTCTTCTAACAAAACTCTAATAagtgttcttttgtttttcca cAGCTTCATCTTCGAGGAGTATGTTTAAGCGTTGATGGAAAAGATTGCGT CGAAGATCGTATGAGCGCCCCGATCAACTTCGATCTTCCACGACCGGAAG GAGAAAAAGAGAAAACGTTTTTCGTCTCAGACGTTGGTGTAGTAGTAGAT ACTCTTTATAAAAACGAATACGAAAAAGCGACGAAACTCGGCGACGACGT AGCCACAAAACTTATCGAACTCGGCGCTGATGAGATTTTAAAGACTGTTA AACTGGCTATCCCAAACGTAGCCAATATACAACTCCCTGTAGCGAATAGT GGAACTATGAAATTTGTTTGAAAGCAGCAGTGACGTTGATGTGATAATTG TatattgtttttctttgaattgaGAGTATAGAgtgaaattgtatattttt tcaaatttggaatGGTCTATTTTGGATATTATTCATTGGATTGGTCGAAA AACCTGtatttaaagaaaatatcagCTGGACTGAAAACACGATGATTTTT TAAgggtaaaaaatgtttttaagaacAAATGAAACGTGGTTAATTTGAGT TATTTTTATCGAAAAACAATTAATGAATTCGTGAATTGATGTTACCACGG GAAAGCGTCTTAACTCGTTTAAATTATTGAGCGCTTAAAGTGTCTCGCTC TATGTACCTTAACCATTTAAAATCGTTGCTCAAAGGGatatttttttacc aaattatgaaaacaaaaaatgtaaatgtttttatttggtaCAACAAACCT GAAAAGATCTTATTATTTTGTAATGTGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005439TCONS_00005439Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005439-proteinTCONS_00005439-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:732116..738544 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HMBSporphobilinogen deaminase isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
138.29 130.71 90.14 92.53 126.49 100.41 159.96 157.83 187.41 177.38 194.79 323.19 353.24 357.59 188.91 176.58 113.92 197.82 272.77 231.76 190.39 186.19 143.5 166.19 308.21 273.18 151.22 150.48 93.85 91.27