XLOC_003111 (gene) - C. hemisphaerica

Overview
NameXLOC_003111
Unique NameXLOC_003111
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000053:346689..350031-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003111 ID=XLOC_003111|Name=XLOC_003111|organism=Clytia hemisphaerica|type=gene|length=3343bp|location=Sequence derived from alignment at sc0000053:346689..350031- (Clytia hemisphaerica)
CAAACTCCTCTTATTTTAACAGGTAATTTATGAAAAGCAAATCCCTCGTT
TTCGCTACATTTTCCCCTCGTTTCCCCCTGGATTTTTCACAATAATTAAT
GCCTCTGTATTTTCCAGGGTTTTTTAGGGAGAATTTAACTTCCAAACACC
GAAGGGGGGGGTAAACTTTTTTGGAACAGCCAACTCCTGTAGCAACTCTC
AATGACTAATTAGACAAAAGACTAGGCACAAAATTTGTACAACGTTGAGC
TTTACTTGTTGACATACGATTTAGGTCCTTAATGGGAATCGAATCTTATG
TTTGGATTACGTCAATCAGTTTCAAAGTAAATATTAGTTTTTGCCAACGT
ATGCCTATTTTTAAGGAGTTGGATGTTTGGTTTGTAAACCCCACTCGATT
TCACGGATGAATAGATTTTGCAAAATTGACAAAAATTTGAGGTCAGTATT
GGCGCTATAGAAACCCCTTTCTGATTGGCTCGAGTTACTTTTTAATCACC
CTTTTACCCAATCAACTGTCATCTTTTATCTGTAATTGTAACACTTTTTT
TTCTCTCATGCAATAAATTTAGGGTTTCTGACGAAGGTGACAGACCAGTT
GAATCTTTCTGCTGTAAAGATGAGACGACTAGCAGTGCTTTTCGCATTTG
GTGTCTTCGTGGCATTATCTTCTTCAGCTCGTAAGTATACTGTACTTCTC
AATGGGCTCTTCAAGAAAATTTGTGTACATGGGGGGTGGAGGATATATTG
GATATTTTGTCCGGGTGGTAGTGAAAAATCTGCAAAAGATACCTGCTTGT
TTTGGGGGCAAATTTGCTCTGTTTAGACCCCTGAATGTCTAATTTTTGAA
TGTCTTTTTGTGGAGAATAAAGGAAATAAAACTGAAGTTCCGAGTTCCCC
AAGGAGCATTAATTTGGGGGCCTTTTNAATATTGGTGAAAATTGAGTTAA
AAATTTCTCGCGAGAAATCGGTCATACTTTAAACGTGCTTTTTTTTGGGT
TTTTGGGAGAGGAAAGACTTTTATTTTCCTCACGCAAGGATGAAGATAAA
AAACAAATAGAAATTCAAATTAAGTATTAGAGGTACTTGGCGACACCGAT
CACTCCAAAGACCACAGTGCTTTACGGTAGAATATAAAGAGTGCCTTTTT
TCAATACCTCTTAACAGAGTCAACAATTATTTAACAATTAAACTCAATGC
GTAAGTAAAAGCGTTTTCATTTTGCTATCTCAATAGAACAAAAAATAGCA
AACATTGTTTAAAAAATTTCATAATTGAATTGGGAATAAGTCATCAACTT
TTCTCATATTGTCAAGTCCATTAAAAATTGAAATGTTTTTATCAGAGTAT
CAAATAGAAGGGAAATGTCATCGGAGCTTTATTAATCTCAAGGGTAATCA
TAAATATGATGTCTTTTTGAAAACNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAATTATGCTGATAGTGCTATTGCACAGTCAG
TTGTGTTTCTCCATCAAGGAGAAATGTGCTCTCTTGAATGGAAGTGCACT
TGGCGAATAGAATTGAATATACAATCAAAAAGGCGCGAAAAAAATTGCCG
TGTATTTAAAAATCCCTAGCGAAAAAGCCTCATGCGAGAATGGGAGAGTT
CCGATTTAAGCGTATTATAATATAGATAATAATTTGTTTCAGTTGTGGAA
GTTCAAGAAGACTATTACGAAGATGACGAAATTTACGTAACCCAACCAAC
TCCCACCGAAAACCGAAACAATAACAAAGTCAACGCAAAACGTATTGTTC
AACCTTACTGGACCCCAAGACGACCCAGAACTACATACGATCCATGGGGA
CCCACAAGACCTTATTGGTGGAGCACGGCACCCCGTGGAACTGACCGACC
ACGAACATATGATCCTTGGGGACCCACCCGACCTTACTGGTGGAGTACCA
GACGACCGTGGAATACTGATCGACCAACATACGATCCTTGGGGTCCTACC
AGGCCATACTGGTGGAGTACTAGACGACCATGGGGTACAAGACCTTGGGG
TACCAGAAGACCATGGGGTACAAGACCTTGGGGAACTAGACGACCATGGG
GTACTAGAAGACCATGGGGCACCAGACGACCATGGGGAACAAGAAGACCA
TGGGGTACAAGAAGACCTTGGGGAACAAGACGACCATGGGGCACCAGAAG
ACCATGGTGGACCAGACGACCATGGGGTACAAGACGACCTTGGGGAACAA
GACGACCATGGGGCACCAGAAGACCATGGTGGACCAGACGACCATGGGGT
ACAAGACGACCATGGGGTACAAGACGACCATGGGGAACCAGAAGACCTTG
GGGTACCAGAAAACCTTGGGGAACCAGACGACCATGGGGTACAAGACGAC
CATGGGGTACAAGACGACCATGGGGAACCAGAAGACCTTGGGGTACAAGA
CGACCTTGGGGAACAAGACGACCATGGGGTACAAGAAGACCATGGGGTAC
AAGAAGACCATGGGGTACGAGAAGACCACTCAACCCATACGTTGAGCGTA
GAATCCAGAATTTCAGCCGTATGATTGGAATGAAGTTGAGAGAGTTTGTC
ATTTCATTGGTAAGGGCCTAAGATCATTAGTCTTTTTGAGTAAATTTAAG
ATAAATTTTGAAAAAGAAAATAATTTTAAAATCTGCTTAAATCGTCAAGT
TACAGTGACGAGATTCTGAGGCAAGCTACGAAGTCCCTCCCTCCCCCCGA
CCCCGACCCCGACGAAAAATCTTTTTTGGCAACTTTCAGGGGCTAGTGAC
AAAGATTTTCACAAAAATTACGAATTTCTTCGACGAGAAGTTTTGTATAA
CGCCTAAGGTATCTCACTCAATTTTCATGCTTTTATTTTACAGCGTAGAA
ACCAACCCCCGCGTCGACCAAATGAATAATGTACCAATGGATGATCTTCC
AGCTCCGTTGATTTGAATTATATTTTACTGAGGTTAAGCATACCAAGATG
TTGACAAAAAATGTAATAGGCTAGTGAAAATTGGATTGATTTGAAATTTG
ATTGGTTGAAACTCACTAGCCGTAGCCTGTTAAATTTTCGTTCGTCGTCG
TGATTTTCACGATTTACTTAACTTCACTATTATCAAAGTTTATGGTTTTA
TGTAAATAAAAATGATTAATTTGAATGAGCGGTTGTTTTGCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005481TCONS_00005481Clytia hemisphaericatranscript
TCONS_00005480TCONS_00005480Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005481-proteinTCONS_00005481-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:346689..350031 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.45	0.4	0.74	0.41	0.28	0.09	7.39	10.4	12.87	16.29	32.58	16.04	124.82	106.82	128.6	207.36	36.64	39.09	173.08	296.14	33.76	31.89	15.5	23.96	28.71	23.73	5.24	5.38	257.57	229.84