XLOC_003189 (gene) - C. hemisphaerica

Overview
NameXLOC_003189
Unique NameXLOC_003189
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000054:240290..247267-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003189 ID=XLOC_003189|Name=XLOC_003189|organism=Clytia hemisphaerica|type=gene|length=6978bp|location=Sequence derived from alignment at sc0000054:240290..247267- (Clytia hemisphaerica)
CTTTTTACTGTCTTTTTTTATTTGCCTTTTTGGTAACTTACTTCACATTT CGTTTAAGGAGTCAGGCAAGTTGTTGATTTTTTTATAGTATCGTTTTCAA TCTAAAGTATTTATCATATTTGCATTTACAGTATATAAAGTAGTAGATCA GAGTTAGTTCAAAGACCGCTTGTTTTGTTATGCGCCTGCCCTGCGGGGCC TGCCTTAGACCGGAAACCTGTCCTGAAATTTCCATGCCATTCACTAAGTT CATTTTATAGAATCTATCAGTGGAAGATGGGGAAATTTTAGCCTGTATTC CCTGGCTAGGCCTGCCTTTGCTGGCGCTTCTTGTCGCTTCCTGCGGCTTG GGTCACTGAGAAACCAGTGAGTGGCACTGGCAGTGGCGTGGCTGAAGGGA ACCAAGGAAGGATTGTCATTACTCAAAAATGCCAGTCTTGAAAGAAGGGA ATATCTATGAGCTGGAGAATTTCTCAGCGTAGCCTTGAAGTAAGCCTATT ATGAAATCCAAAGTCTTTATTCCATTTACAGTCGAGGATTATGCCCTAAA TAAGAGAATACCCAAGTTAGAGGATTACCTTATTTAGGAGATTTTCAGTC TCTTATTTAAGAGAGCGTTACCTAAACTAGGAGAATTCTGTACGTTTCAC AAATTTACTTCAGAGCAGACTATTTGCGCAATATGAAAATAAGATCACGT GAAAGATAACGTTTCCGTGATTCCGATGACCCAAAAACCAAAATAAAATA CCTTTTCATTCTTTTTCAAACTTCGAAAAACCATAAATAGCCTCATTTGC ATGTGATGACGTAATTTTTAAAATAATGAAGAAACACCCTTGTCCTTTAA AACGCGTTTTTTCTAAAACCCCCTTATTTAGGAGAGACAAGAGCGACTCA CTTTCTGTTTGACCCGCGTTTTGACCGCGCTTAAACGCGTTTCTTAAATA TGGCCCGATCTATATTATTACTTTTCACGAAATTCTCATGATGTAGATCG GCCTTTAGATTGGTAGAACCTAACCATCCTAGGTCCACGAAACAAAAGCA GAACTCAACCAAATTTTGCTAGAAGGGAGAAAAAAACGTGCTGAGTCGAT CTATGAAGTTCAAAACTTGCGCAAAATGATGAGAAGGCCAAAAATTAACG AAGAAAAAAAAGTCTCCTAGTTAAGAGAAAGAAATCTCCTACTTAAGAGA CCTTCTCTTAAATAGAGTATATCTCTTATTTAGGGCATAATCCTCGACTG ATTTACTACGTGTCATGTATCTATCTCGCTCGGTTTCTCTCCACCACGGT GTTCCACCGTAGAAGCAGTAGGTAAAAATGCACAATTTAGTACGGTGGGA GGTTAGAGGAATGTAACTTTTTCAAATTTTTTTCTTTCCTTCTTTTAGAA TGATTTAGATATTTGAACATAAATATGATATGATATCAATTTTAATTTTA TGGATCTCTCCTCAGATAGTGGAAGTAATTTGATTTGTGAAGAGTCTTTA CGTCACATAGAACAAAAGAAAATAGCAAAAGAACAAGGATTTTCCCATAG CCACCATTTCGCAACCATTGGGAATCGCAATTTTACGGAAATGGGAATCC TCATATCAAATATTAAAGCATCTTCTGAAAATTTCATTCTTCCCCATAAA AATGCAAAAATGAAAAACGAAGAAGCTTCGTTTTCTGATCATCTTTTTAC CATGACAGGCTAGCTCTAAAGCTCTAAAACAGCATCCAATAACATGAAAA CCAGAATATGATTCTTCAATGGGAATCAAAACTAAAAAGTGTATATACTT ACAAACATCAATATGTCTGATCTAACAAAATTTATAGCAGCACTGTCATC ATTGACAATAAAACAAACAATATTCTGTCAAGAGCCTTGTAAACATTCCA ACAACTTCCATCGAAATGATCTATCACAGCTAGATCTACCATTTTTAGCG CGGTCCGAGGTTTGAGCCGAGAATGCTCGCAGAACTTTCATTCCTAGAAC TTTTGCAAAAAAAAAGGAAAAATAGAAAAGTTGTATTTTTTATTATTGCT CTATTCACATACTGAATTTGAAAGATCTACTATGTGGCGTTTTTTTGCAA ACTTCAAAAATTGAATGAAGTTTTTATAAATTGATTTTTATTTTTAGCTT ATGTGGATTTGGCAAAGTTGGTGAGTATGGCAAATTTGGAAGTCAATTGA ATTGGCTGTAGGTAACTAATTACTGACCTATCAAGAATCAAGGATATCTT CCTTGCAATGTATTTATTGCAATTATTTGCGGCTGCAACCAATTGCATCA TATACAATGGATCAAAGATAAAATTTACTAAATACCAGTCAAAGAATTCC CTCAATTTCAGTATACCACCATCACAGTAGTTTTCATTTGTGTTTAGCCT ACAGGGTAATAACAAGTATATACGGGGTGCTGGTCCACAAAATCATGAAC AAACATCGATTATCCAAAATGTAGAAAAAAGCTTGTCTTTATTAAAAGAA TAAAAATATTTCATCTGTGAGTTAAAAAATATGATTAATTATGTACAAAA ATCGCCTCTTTTCTGTCTGAATTTTGAACTCTGTTTCTCGTATACTAACT GTGGTTGTGTTATGAAAAATGTAAAAAAGTGAAGTACAGCAGTTTATACC TCAATTGCAGTAAAAAATACTACACACTAGTCAAGGGAATTCCTCGACTG GATTAAAGTACCCTGTATATTTATTTGCATTAGGTAAATGCATTTGAGCT TTATATACCCTGGACCAAGTTTCTCAATCCTGTCCAAGGAAAATCTTTGA TAATTATGTTTTTTGAAAAATTGTATCCTAATGGCAGCAACCACCTAATA GTGGTGTAAATGTATCGAGAGCACTAGGTCTAGCTCCCTCAAATACTTTT GATGATGTAGCGCCGTTAGACCTTAATTTTTAACACTGCAATGACTTCTT TGCTGGTCCCCCTTTAAAAAAGCTTGGTCCAGGGACCAAGGTTCCACCAT AACTTTAGTTCAATTTTCTTGAGACAGTTTTTTCCAAAAAAATAATTTAT TAATTAACATTTTCTGTCTGAAACCTTGCTCAGATAAGAGAATGAAGAAG ATTTAACTAAGAAAAATCTGAGTATGAATCTCTTGAATCAGCTTGAATGG GGAAAAGTTGGAAATGATACCAAGATTTAGCTCATTAAAGTCGCCATTCA TATATATGCAACAAGTAAGGTAAAGTGTAATTTACTTTGAAAAAGAAATA TTTGATAGTCTACTGTTCTTTAAAATACTTTTTTAGTTGGAGCAATTCTC AGCTAATCCAGATGACCCAATTTCCTCATTTGTGTATTTGAAATATCTTT GAAATACCAACCAGACAGATGTTCTAATGGAGTTAATTGCCTTCAAAAAT TATCATCTACCAGAAATTGTCATAAAATTGTGTCCTCCCCCCCCCTTCAG TCCTGACAATTGGCGCCGGCATACGGCAAATGCCGAGGCAAAAGCTGAAT TAAATTGGATTATAGTGTGTTTGCGTCGGCAAAAAAAATGCCAAGGCAAA TTTTTCAAAAGACTTTTACTAAAAATGATAACTGCCGAAACAATCGAAGA ACTGCAATGTAGCAGTGTAACGTCCCCCTACCTCCCTTTAAATTGGGAGA AATGCCGAGGCAGAATCCTATTCTGCCGAGGCAAACAGCAAATTTAGCCA TTTGCCTCGGCAAAAAAATGCCGAGGCAAAAAAAATTGAATTGCCAGGGC TGAACATTAATCTTAAAATCGCTTTTATTGTGCCAGGGCTCAAAGCCAAA AGAAAAATAAGCGGGCGGAACCGCATTAAGCAGGACACTCCCTCATTTAA GCTTGTCGTTCCGAGTTCCGCTCGCATACCTTAGATGTCCCGCATTTTCG AGAAAACTCAGAAATTCGTAGAACTCTTGGAAAAAATATAGAAATGCTAC TAAAAGTAAAAATATGTTTCCACAAGCACAAACTCACTTCTTTGTTTTTT CTCTTCGCTCCGTAGCGGTCCGTCCAATTGCGTNNNNNNNTTAAAGATTA ACCAATTTTTGTTCTATTTTGTCTACTATTCCTTTTGCAGCAAAATTTTA CGTTTGTGTCAGGTTGAAATTTGAGAAATTTACACAGGTATATGGGGGGA ACACTGATATTTTCAGAATTTTCTGGGGGGAAAGCAAAAAAGAGGGGGGA AACTAAAAAACTGAAAAGTCATAGGGGGAAAAAAAAGAGAGGGGAGATTC AAAAAAATCTTGTTTGGTGGGGGGAACAAACCCTGGAGGACACTATGAAA TTGTAGCATTGCTGGTAGCAGGCTGGTGTTCTTAGCTAACTGCATTAGAA ATTAGCTGTTACAAGTTAGATTGTTAAATTTATTGTTCCAGAACTGGTAT TTTAACCGAAAAAAAAAAATTTATTGAATGTTTTTAGAAAGAAAGAGGTA TTGGTCATTCATAAGCTTGGCATTTGAAATTGTGGTATTGAAGTTATTAG TCGGCACTTTTTCCACTCTATTTTCCAGCTACTTTTATTACACTGGGCTA CACCAAACAAATAACCGGCTGATTGCCAAAAAAAATAAAGCCTTTTTTTT AATTCAACACATTTTTGGTAATGTTTTCAGGGAATATTTCTCTTATATTT TTGAGTGGGAAATGAGGAATCAGACAGAATCAGAAGGTCACTTTAGTTTT GATTTTTATTAATTTTTCTTAATATCAAAGCTAACTTGGATTTTGATAAG GCTGTTCCTTAACTAAAAGTTACTTTAATAAAAGATTAAAAACATAAATT TCTCTTTTGATTGCAGTCAGTGTTATTGTCCATCAGTATACAGTAAGAAT TTAAGCTTATTAAAAGAAAGATGCAGGCAAAGAAGAAAATTGTGCAATAC CTTTAATCCTTTTTGATAAAACACCATTTAACTTTCATCTAATGTGTTAA TAATATTCAAATTGAACCCTTACAAAAAGTAATTGTCGCTCAAAATTACA AGTTGAATACAACTTTATTACTTCATTAAAAGTGTTGCATTATTTTTATT CTTCGAAATCTAAATTTTTGTTATTTTATAACTATCTAGCCTTTTTGAGC TGCTTTGGTTTATTCCCTCCAGGAGCAACCTACTGTTCATTGATCATTCT ACTTTTCTTTTTCTGTAATTATCAAAAAAGAAAGGAATTTCTAATTGAAA CTGTCAACAATGGATATCAATTCAACTTGCTATTAATTTTTTTCAAAGGG GGGATATCACTTAATGGGCTTTGTCTTTTTTAATATTGTTTTGTTGTGAA AGGAAAGCTCTTTTAAAATCGACTTTTTGAATACATTAAGTTTGTAAATA AAAGAAAGACAGCAGTCATCAGTTAGAAGGTTGAGTTTAAAAATATGATG ATTTAATTGAAATGTAGAGGCATATTTTTGAACCTTTGGTTAGGATGAAG TACTTACATGAAATCAAAGTTAATACTGACACTTCTAATGTATTTACAGT AACTTTAATGGCAACAGATGGAGCTGAAGATAAGTGTCGACTTTGTGGTA AAAGAATTGATGGTGAAGTTGATAAGTGGTATGTTCCTTACCACTCCAAC TGTTTCAAATGCTCCAGTTGTAAAGTACCTTTAAATCCAAGGAATTATTT TTTAACCAACAAAAAGCAATTTTATTGTTTTAAACATTATGATCATGATG GCCCAGACAAGCATGGACATTTCTTCAGGGAACTTAAACAATTTCGTAAA TATTCTATCGAGAAATCAAAGACTTCGACAGTGAATGGGAAAACCTCCCC TGTAAAACAACATTATCAAAAAAATGGACTCGTGAAATTAGATTGCAAAT GTTCAAGTGGAAAGTCTTCAGGTTATTGGTATGAGTGTACTTTCAGAAAT TGTCCTTCATCACAATGTTATCTTAAATCGAGAGACTTTAAACATTTTCA TGTGGCAACCTGGAAGATCACATCTGGTAAAAGCACAACACAAATTGAAC ACAGTGAAGAAGAACTTTATGAGATGTGCTATCATGGACAGAGACATGCC AATTTTTATTCTGTAGATGAACGTATTGGTCCTATTGTATTGAGTTTGAA GCATGAATCTATCATGAAAATCCCTTTTTACAGGTAATTAATTCCCCTTA CAGATGTTTTGAGTCACAAACTAAGGGTCTACCCTTCTCTAGCTGATAGA TATCTTCAAAAGTTTTTTTATTCAGAAGACAGATAATGCACTCAGTGGCA TAGATTGTGGTGTTCCTGGAGTATCAACCATACACCTATCTACCTGTACA GGACCAAGAAAGACTGATCTGATAAAATTTCTATATCAGTTTTGGTCAAA ACTATCAGTTTTGGTCAAAACTGATATAGAAATATAGTCTATCTCTTGAA TTTTTTCTTTTTGATTCTTTTTTTTTCTTCATTTAAATAGGATTCTTCTA CGATCTTCATCACACATCACAGAAGGTTTAATCCCAACGACCTCATTCTG TTTAAATGACTATGATGATAATGCAGTACTGGAAGTCATCAGTAGAGAAT TGGACCTTACTTCAGACTTGAGACAATTCAATGATTCCATTCCACCTACC AAATTGCTCCTGTTGGATAAAGTAAGAAACAGATTGATCATTATAGTCCA TTGATATGATGGTATTTGATGAGCACTCAGCCAATTGGTCAATATAGTCC AATGGTATATGTAATAGTATTTGCACTCAACCCAATATTCCAAAATAAGA TTGGTATATTTTATTCTGCTAAATCTGACTTTGCAATCTTAAATTGTAAA AATAATTTCTTTTTTCCAGGTGATGTTGAAAAGTGAATTCAAAATAGGTG TTGTTTTCGTGGACAAAGATCAGCTCAAAGAGGAGCAATTTTTTACCAAC ACTACACACAGTGACGATTTCGAAGAATTCCTTACATACCTAGGCGAAAA GATATCATTGAAAGGATTCAATGGTTNT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005630TCONS_00005630Clytia hemisphaericatranscript
TCONS_00005629TCONS_00005629Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005630-proteinTCONS_00005630-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:240290..247267 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.46 4.33 3.25 2.51 34.59 26.1 25.11 28.24 18.12 19.32 14.51 18.39 19.67 18.07 12.18 13.83 16.59 19.7 14.68 17.35 18.39 17.36 19.2 19.69 11.7 14.48 20.63 15.95 17.08 20.93