XLOC_003191 (gene) - C. hemisphaerica

Overview
NameXLOC_003191
Unique NameXLOC_003191
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000054:318372..328646-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003191 ID=XLOC_003191|Name=XLOC_003191|organism=Clytia hemisphaerica|type=gene|length=10275bp|location=Sequence derived from alignment at sc0000054:318372..328646- (Clytia hemisphaerica)
TTCTCATTCAAAATCCAATCTTCTTGCTAGGTATTGCTCCAACATCCTTA
TCAACACAGAAACATGAAGCATAAACAAACTAAATTAGAATGGCAAATGT
ACACATCACAGAGGCACAGAAATTTGATTTTATAATTTTTTACAAATCAC
AAGTCCAAAGCAGAAAAGAGTTCTATAGTAAAGAAGGAGAAAAACTTGAT
TTTTAAGACATATGTATACAAAAGAGAAACTAAAATAACTTAATTAATCC
TAGATTTGTAAAAAAGAGAAATTGTCACTAACCTGAGATATATTTATTCT
CTGACACTTTTCTGTTCATTTTCCATTTTCGACCTCCATCCCACAACTCC
ATAAAGAAATATTTATAGTATCTGTGGAGGAGATTATATAAACAAAACAC
TTCATCGCTGAAGCTATATAGTTCATTCGATTGAAAAATAAAACGACGAG
ATAAAAACTCATTTCACTGAGTATGATAATTTAAAAATGGCGGGAATTCT
AAAAATGGTAGCGCATTCAGCATGTGAAGAGGAAAATGTTATATCGGATG
GCCAAAAGTCACCTCACCTTCTTTTCTTTTCTTTCCTATCTCTTATCCTA
TTTTTCTCTTTTCTGACTGTCTGAGTTTCTGAGACTTAGTTTCTCATTTC
TGACTGAGTTTTCATACCTGTCAATCAATTGTCCATCAATTTCGACCAGT
CTAATTTTCGCACCGAGTGGGATTCGAACCACCACCAAAGAAAGACCTTC
ACATTCGGAAGCCAGCGCTCTATCCGTTGAGCCATCGCCGCACAGCAAAA
CCACGCAATTCATAACAAATTATACCGAACTGGCAAAAGACGGGGGTAAT
GTTATATTAATATGGGTAACAGTACCCCTTTTTTAAACCTGACTGAAATT
CGAGCCGTTACTAGCAACCCTGCGGGGCCCAAGGCGCCGAGTATGCACCC
GGCACAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGACCC
TACCTAACCCCCGGAAAAGTGACTATCAGCGATCCGTGGATAAAAAAATA
AAATTAAAAAATGAAGGTGACTATTGGCCATCCGATATAAGAGCAACCAT
GTGAAGAATGTAGCATGCGATTTTAAAAAACTCCAGCATCGAAGCAATAA
CAAGATAATATTTTGTATACACACTTTAGTAACATCATTGCATCAATGTT
AAATGCTGTAGGTTTACTTATCATCCAACATGATCATCGTAAATAATTAG
GAAAAGAAAAGGTCTGTGCTCTGTCTGTGTCTGCTGTATATTTATTCTCT
TCTTGTGTTTTACTGTTTGTGTCTTGTAGTGAGGTATTTTTGGACCTACC
CCGATGGGGTAGAGGTCCTATAAATTAACCGATGTCCGTCCGTTCGTTCG
TCTGTTCGTTCGTCCGTCCGTCTGTTACCAGCTTTTCTCAATGTTGACTC
ATTATTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCTAA
AATTACGGGTGCATGTCTAGTCCGACACTTTCTAGTCCGACAGTAAAATA
GTCCGAATCTATAAAATAAATTTAAAATTTGGTAGTCTTTTTTTCCGACG
TCACTTTTGTCCGAAAACGAAAGATTTTTGAGTGTCAAATGTTGAATAAG
GGTTTTTCACTGAGATAATATTAATAAAAGTTGATTTTGGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGGTTTA
GGGGCCTAACCTCAAAATCGGAACTTTGGATTTTTAGAAAAAAATGTGCC
TCCTCTTCCGCGATTCATATTACGTTTTTTATATGTTTTTTTTACTCGTT
GTCGGACAAAATTGTTGTCGGAATACTGACGCATTCGTCAAACCCAACGT
TGGACATTTATACTGTCGGACTAGAAAGTGTCGGACTACTGACGACCTCC
CAAAATTACGGAGCCCGATTTTCGAAAAACATTTTTTTACGGCCGAAAAT
GCTGGAAATATGCCGGAAATCGCCGTTTTTCTAGATTTTCATTAGATTTT
TTTCTTATAATTGGTGGTTTTTTTCATTCAAAAACATTATTAATAGCAAT
CAAGCATGTTTCAATTTTCAAAAAAATTGATTTTTGAAGCCGGAACTATT
CAAAAATCGCCGGAAAAACCTATTTTTGCCGGAAAGACAGTATTTCTTGA
ATTTCTCGAGCTGTACCGTGAGAGGTCCTAAAGCCGACAGTCCAGCCTAA
TTCCGATCCCCTAAATAACTGTTATGAAAAAAAATTCTATGTTTACAAAC
ATTCCCTCTCCAAGTTGAACGATAAACTATTGCTAGAACTCTCGAAACAA
AACATCTAACAAGATAGCTGTAATGTCAAGATGTCAATTAATGTAATTAA
AAAGTGCGATTTGTAAAAATAATTACCTTTTATTCTGGATCAGTTGCTCA
TGTTTAAAACGATAACAGTTTTGTAATAAAAGTGACTTGTGCGGGAAAAA
TACGAAACAACTTGGACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNCT
AAATTGTAAAAATGGCGCGAAGTTGAAAAAAGGGCGGATGTGGTAGCACT
AATTTGAATAACAAACATCGAATCAATGAGGCGGCAACTATCAATGCCCT
TTTTACCACCTATAATTCCGGATGTTTATTTACGGAAGGCCCACAATCGG
ACAGCTCTTCATTTAAGTGTACTCTTTGACGACATATATTATCTTTACTA
GAATAGGAGCAAGGTGTCATGTAATATATAATATAATGTAATATACGTCG
TCTATATGTATCCTTACACAAAGTCTAAACCCCGCAATCAAGCCAAGTGC
CAGTGTAAAGTAATAGAAACCAGGCTTGATTACGTAACGTTTCAAAATGA
GCACGCTCGTACACAGACCTCTTTTATATTTTCGTGTGCTTTGGAAAATC
AAAACATCTCGTTACTTTTTATGATCATGCTGTTACTACTGTTGTCATTT
ATGACGTTGTGCATATTATTGCAATAAAAAAATATGTTTTGTTATAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCG
TCACAGCGAAAGGTTTGTTTTTATTTTAGTTTGTATCTTTGAAAGACCCC
ATCGGCTTTAGGCTGGGCTGTCGGCTTTAGGACCTCTCACGGTACTTAAT
ATTTTTTTATGAAATTTTGCGCACTGATGAAAGATGAACCGGAACTTTCT
ATTTCTATTTTCCCTACACTCCCCTTCCCTCTTCCCCATCAACAATCAAT
GATAAAATTTAATGTGTTATGCATTTTTGCAAAACGCTATATCGTCTGAC
TGATTGTTTTCATTTTTCTCCTTATTGCCTTATTATCTAGCTTTCATCAT
CAGGTAGGTCCATTCAGCATGTTGCTTGTTTTATGTTATGATAACAAGGC
GTTGACAACTAACAAACCTGTAAAGGGTCATTCAGATAGTTTGTATATTG
AATGAAATACTGTGAAGTCGGGTAACTTGCATCAGTGGAGGCTAACATGC
ATAGCCCTCGAATGAATGACCTGGCTGGTCCTTAAAATACAAAGTTAAAT
CAAAACAAAAATGGTAGAGTAGAGCTGCGAGCAGAGCTGCGTAGGGCGGC
AATCACAAATATCTTCATTTCGCGTCCTCGTTGAGTCGGTCGGTTGTAAA
AATTTTCGGGTTTCCATTTTTCCATCCATTTTTGGAGTGCATTCTTGGAG
GAAACCACCAGCCAGCCAGCAGCCAAAATAACCGCGTGTAATGGGTGGTT
TAAAATTATGACCTTTGAACACTCTGACCTCCGACCCCAAAATGGCGCAT
GTTATGATAAACAAAGTCAAAATGCTGCGAATGCGCTAGAAATCGCTCGC
TGAATGAAAATCGGCAATAATAAAATTATTGAACGAAGGAAAAGTCATTG
ACATAAAAAGTCCGACAAATTTACCGACTCACCGACTCAATTCTACTCAA
TTTTCGAGAGTCGGGCGGGCGACGCGAAACGAAGATATTTGTGATTGCCG
CCTAGTTCATTCATTTGTTTTTAAATTTTGCTGCTTTGATTGGTCGGTCA
TTTGACGTCATATGATATGAGGCCTATAAATGTTAGCCTCCAATTATGCA
ACTTACTCGACTTCACGGTAGACCTTTGGTAGGGTACTAGTGTCATTTTG
CATAAGATTCCACTTTGCACACTAAGATTTTCTCCTGACTTTTCCACTAT
TTTTCCCAGGATAACCGACATATCATGAGATTAGAAAGGGTTTTTTTCTA
AAGGCACAGAGAATCTTATAGAATCTTGTGTTTACTTACTACATGATTTC
CTCAACTTTTTGAAGTCCTGGTCTTTTTCTGATAGAAAAGTGACAGCCAA
ATCTTATTAGTGCAGGAAGTGGAATCTTATACAAGTAAACCATTATTGTG
AATAGTTGATTGAGAGAAGGTGACTGTCTATTGAATAGTAAATTACTCCA
GCCAGTAAAACGGGATAAATTATTTTGTATCTACCGGGTGTGCCACAAAT
AAGGTACCCTCTTTGATTTGATATTGTAGGCAGTAGAAAATAGATTTTTT
AAAGATTGTTTTGGAATCATTCAGAGGAAAGCCTAACTTAAAATTTGGTG
TATTACTTTTAAATTTTACTTCATTGGTTCAAAAGTTATGTTCAAAAACC
TAAAATGTCATTTTTTTAAAATGTCAATTTCTGAATGCTCAATTTTTATC
TTTTTTGGTCACTAATATTATTCATAATGTTTTTGGAAGTCTTCAATGAG
AACAAAAAGACTCATTTAGGAATTACAAATTAGAAAAATAGAAAAAAATC
TACTCTCTAAGGGTCACTTTCTTACAAAATTGTTTTTATAGGAGCAATTT
TATGAGAAGAGGATGCTGAAAATTAAAAACAAATTAATAACAATCTGAAG
CTCAGCTACAGCAAATATTTAAATACAAAATAATGAGACCAAGGCTGAAT
CAAGAATATAGAGAAATAAACACCATTACTCTTAGGTGCCAAATAAACCT
TATTGGGACCCCCATGTTTATAAATTTTTAAGAATATTTTCAGCTGTCAA
AGAGAAGGTCCCTTATTTTGCTCTAAATAGCCTAATTTTAGCCTATAATT
ACCTTATTTTGGGGTTTTCAGAAGTACAATTTCCTACCCCCCCGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTAGAATCTTATTACTTTTTCTAAAGAACGCGTCATCTCTATCACTTTA
AATTACCAATTAGTGAAGTATCTTGTAAAAACTCCAGCTCATCCCAATTA
AGAATCTGAATTAAAAACATTTTGGGGATTTCATTTTCCAAGAACATTTT
GTCATATTTTAGGCGAGGAAAATATAGAAAACTCTAAACGAGAAAAATAT
ATCCTATATTGTACNAATCGAACTGCGCGGGCAGAAAATAACAACAACGA
CCTCAAACTGAACGCTATTGTTATATTGTACGAGTAAAAGTGTAATAACT
GGTTTATCGTCAACTTGAAAAATATCAACAAACTTTTCTCTCTCCATTTG
TGTCTTTTCCTATGTTTTTTTTTCTCTTCCTGTTTTTTCGCTCTCCTCTC
TCAACATCAAAACATTCGAAAATAGTCTTTGGAATCGAATGGTCATTAAA
AAGAAAAATTCTTTGAATAAACCTTTGTCTTGTCTATTGTAAGCAAGAAA
AAAAACATTTCTAATCATAAAATTGTACAAAATATGATCTCTCGCTTACC
AGCCCCCTTTTTTGAACGTGGTGTTGTTTGTATTTGTACAGTACAAAATG
AAATACAGCATTTATGTACACATTTTTAGCCAATCAGATTGCTCATATTT
TTCATGATGACAATAACACTCAAAAGCATAATTAGTAAATAGGATGAAAT
TTTCACCTCAGATGCATCCTGCTGAGAGAAAGCAATTCACAAAAAAAGCA
ATTAATTTTTGCAAATTTCTGCTGATGTCATAATCAGAAAAATGGAATAT
TTTTTTCAAAAGTTGGAGATTACCAATACCTGTCCATTGGGCAAATTTTC
AACATCTTTTGATTAGTACTTTTTGAGATATTTAAATTCTAATTTTTATG
ACGTCATCAATAAAGACAAGAAATTTATTTTATTAACAGGCATTTCTGAA
ATCTACATCCTATTACGCTTCTTTTGACGTGTAAATGACCGAAGACCCTC
ACTTTTCTGCGCCAAACTTATGTCCTTTTATACCATACGTTACACAAGAT
GAGACAACACTTGAAGAGAAAATTTTGACCATTGATTTAATTTTTTCTAA
TCTCAAAATGGAAAAGTTTTAAGAATCACAAGGCTTACTTTGATTTATGT
AATTTTTATTAAACTGTATCATATAGGCAAGTTGTGAGGCCTTTGAAATC
TGTTGAATATACACCCCCTTCTCACAGACCCACTGTGACCCCTTCCCACT
GGAAAATTTGGCCAAAATATTGTCCCCAGTGAAAAATTATACTTCAATTT
TTGACCTCACTGAAAATAATCAAATAAACCNAACATTTCTTTCTCTTTTT
ACACCCCCTTCTCACAGACCCAATGGGACCCCTTCCCACTGGAAAATTTG
GCCAAAATATTGTCCCCAGTGAAAAATTATACTTCAATTTTTGACCTCAC
TGAAAATAATCAAATAAACCAATTCCACTGCTTAATATCATGGATGTTAT
GGGTTGGTATGGGTTTATTAGAAAGACTTCCTAGAAACTACATAAAATTT
TCAAAATCAGATTTCCATCGTAAAATACACTTTATATTTACGTTTTTAAG
GGCCTCTTTCAATTTTTTTTGGCAGATTTGTCAAACTAAAATCATGCATT
CAATACCCTTAGAGAGAGAGAGAGAGAGTTTTAAGAAGGTGGTGACAAAT
ACTAGAACATAATACAATATCTTGGTGGTCTTTAAAGGTGTGTTATGGTA
CTTCCCTTACCTTCTCATGCTCCTCAGGTACTTGTAGTTGTTAAAGGTAA
AATCAGATGGTTTGAGATATTTTGCCTGCAGATAGCTTCTAGGATTTTAG
GAAAAACCTCAAAATTTTTTGGTGTACTTATTTTCCTAACTCAAGTTATG
CCACTTTGAAATTTTGAACCTTTGCTTGAAAACAATAGAAAAAAGTGTGA
AAAGTCCATAGTGTGCAGAGGGGTCTGAACCCCCCCATTAATATTTCATC
CCCCCCTATAAAGGTATCCCCCCTATTTTTAAAATTTTTTGATCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACAGGGGTCCGA
GCCCCCAGCATATAATTTGTACTCCCAGTATTGGGGAAGAATTTTGATGA
ATAAAATATATTTTTCAGTGTGAATTCGTACCAATACAGTAGTCAATGAA
CTTGAAAACACTAGCAAATAAACAGTAAACTAATAATAGTAAAACTAGGA
AAAATAAGAAATAAGACAAAAAGTTACTATACCCCCCATTTTTATTTGAT
CCCCCCAAGCTCAAACCCCCCATTTTAACTGGAAAATTGCCCACCCCCCC
CCTATAAAGCCTTCCTTGAAAACTCGGATCCCCCCCCCTTAAAAAAGGGG
GGGGGGTTCATACTATGAAAGTCCCTGAAAAGTCCCATTTTTCGAGATTT
CAAATTGGCATAACTTGAGTTAAGAAAATAAATACACCGAAAAATTTAGA
AAGTTTTCCTAAAGTCCTAGAGGCTAGCTGCAGGCAAAATATCTCAGACC
ATCTGATTATCCCTTTAAGGCAGGTATCAAAATATACTTTATTTTATTTT
AGAACAAAAAATAATGGATTATACCAAAGAAGAAAGTGATTTTGAAAAAA
CGCGCAAAGAAAATATCAAGAGAAATGAAGAAGAATTTCAAAAGCTTTTT
CCGGCTATGCTGCTTAAACCCTTCAAAGATTCACCACGTACCACTGAAGT
TCGTCGTGCACGACGCAATAACTTACACAGTATTGTTCAAACAATCACTC
CTAGGGAATCTTTGAGAAGGTCATGTAAAAGGGAAAGAGAACCCAGTTTG
GATACTTTTTCTGATTCTGACGATGGAGGAGATGACGAGGTAAGCAATGG
TAGTTCTGGATCTGCTGTTGTCGTCAAGTTTGGACAGTGGAATAAGAAGT
TCAAATCGCTCAGATATCAAGATGATGTTAAGGATAAAGATTTCATCTAC
GATGGAGATTCAATTTCTGATGACGAGCACCAAGAGGAAGGGAAGAAGAG
GAAGAGTAAAACTCCTCGTGTGAAGCCTCAATCACGTGTTAAAGCAGCAC
GTGTTTTGCGTCCTTTCGATGCAGTAACTGAGGAGGATTTGATTCTAGTG
GCTGATCGAACGAGCGATAAACGTTATGATCAAGTGGATGGTACGAGTTG
TCATCAATGCCGTCAAAAGACGGACGACTTAAAAACAGTATGTCGTAGTG
GGCACTGTGTCGGTATACGAGGCCAGTTCTGTGGGCCATGTTTAAAGAAT
CGTTATGGTGAGTGTGCAAAAGAAGCCATCATGAATGCCACGTGGCAATG
TCCGCCATGTCGTGGTATTTGTAATTGCAGCTTTTGTATGAAGAAACGAG
GACGTCGTGCTACAGGTATTATGATCCATGCTGCAAAACAAAGTGGGTAT
ACTGATGTCTCCTCTTTTCTTGGATTGAAAGAGAAAGTCGTCGAATGACG
TTGATACTTTATTAACGTTTTCTTCAATCATGTTGGTTGTTTATATGAGA
TAGACTGAATTTTTCATCCCTTGAACAATAACTGCTTTGCAATCCTACCT
TTGATCTATCTTAGATTTCTTTATTAATTCAGTAGCAAAGAATTTCAACG
TTATTACTTTCAAATGATATTTTCAGTATAATTTTCCAAACAATTGGAAA
AGTTTTTAAGTATTTCATTTACATTTTATTTGTATATAACAAAAATCCGT
GTATTTTTTCATTAAAGCCCAACTTGCCATGTAAACCCTTAATAGATATC
CTCCCAGCGTAGAGGACTATCCGTACCCTTTGCATTTTTTGTCTGTTCCC
TAAGTTCTCCTTTTATCCATTTGCATTATACCCCCTTGCTGTGTTTCCCC
CTTTCAATATCAACCTTTTCCGAACCTCTGTTCCACGTACTTTCGTACCT
TTTAAAGTATTTCTCATTGGTCAATTTCAAAGAAAAATCTTGAGGCATAT
TATATTCAATGGTATGTTATTCTCTTTCTAGGAAAAGATATTTTTAAAAA
TTTTTAATTTAGTATTACGTTCCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005634TCONS_00005634Clytia hemisphaericatranscript
TCONS_00005633TCONS_00005633Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005634-proteinTCONS_00005634-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:318372..328646 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.34	15.56	20.89	19.8	7.35	4.93	5.8	6.16	3.66	3.85	2.06	3.13	2.47	2.88	3.46	2.77	4.38	3.1	0.5	0.47	2.59	2.47	11.44	10.77	8.53	10.93	1.59	1.82	7.26	7.04