XLOC_003251 (gene) - C. hemisphaerica

Overview


Name	XLOC_003251
Unique Name	XLOC_003251
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000059:313731..319616+

gene from alignment at sc0000059:313731..319616+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_003251 ID=XLOC_003251|Name=XLOC_003251|organism=Clytia hemisphaerica|type=gene|length=5886bp|location=Sequence derived from alignment at sc0000059:313731..319616+ (Clytia hemisphaerica)
CAGTTTTATCTGAATGAGATGTTTGAAAAGTTTAAGTGATGTTACATTAT
TGTGTTAATATCACGGAGTGGGTTATCGATTGGATTCGGAGATCGGTTAT
GGATTGCACTAGCGCCACCCCTTGAttcttttctttaatttctgaCACCA
AGTGGTATCGAGTAtcattacacccccttctcacagacccactgggaccc
ctccCCGCTAGAAATTGGccgaaatatcgtccccagtgggaaattagact
ctaatttttgtccatggtgaaaataatcaaataaacaaatcctcactgta
AACTTTGTGCTATTTTCCTCCatctccactgaattttctgacttgaaaag
tATGGGATAAGAATTCCAGCCATAATGCATAAAATGTCAGTATCAACCCT
CATCAAGTTTTTGTCCGTTATTTCTACCCCCCCCCACATCTGGCTGAAAA
tattctaccgggtctgtgagaagggggtgtatcatttTTCTACTAAGTAT
AAAGTCTGCTATGACCTGGTCAGGGGTTCAGCTAATACTCTTGATCACCG
TAGCCGAGTGCTTTACCGTTGCACTCCGCAAGGGTGACCGAACGTTGGCC
CATAAGAAATAAGACAGATTTTCTCCCCTATTAAATAGTTTAAAGCTCCC
CTGATTATAGAAATATTATTTAATCCCAAATATAATTTTCTAACTCTTTT
TTACAGTTCATTCATTGTTCGGACTAGTAAGATTTTAGTTGATAACTGAG
ACATGTAGCCTAGTCTAGACTATCCCCGGGTGTGTCTCATTCCACTGTAT
TGACCTGAGTGACAACTTGCAGTCATATATCAACTAGTTTGTTCATATAG
CACAGATCAATTAGAGACAATTAGGATATAATAGAAGATATAATATGTCT
TAATTGCAGACACTCGACCGCACAAATAACTATTCTACGGATATTTTGAA
CTAAGATGTAGCTATAAGGAACTATGCAGCTTTTTGCAGTACGTTCTTTA
TGCTTTAGCTTTTATTCATAAAGAATCTGATCTCCGAGAAAGACTATGAT
AGTAGTGAAAGATGTCGCGGAACTTACTTGGAAATTGGCGTAAGGAATAT
TAGAAAacatagtttttttttcttcttctttcttagatAATTTGTATGCA
AAGCCGTTTCTTTTTGCTAGGTTTTTATATGACAAATTTCTCTAACGAAA
ATGAGCGATAAATAGAAAAAGATGTTTGGTAATGGAATGAATCCGATCTC
TTTTTCCAGTAAAACTCCGGGGGGTTACTAAGTTTGTGAGGTGACGGGTA
TACCAAATTACCAAATTTTATGACTCTTTGACAGGGTTGACTTTTGATAT
TTCGTTTAATATCATATATTCACATCCTTGAAAGTCTCTCATaaagggta
caaaaaccattaaaaagcaaagaGTCTCTTAAAGGGTCCTTAGTACCCTC
GGGCTTATTAAGGTATATACTTTTGTTNNNNNNNNNNNNNNNNNNNNNNN
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taaggaactttgaggctgaaattctctgtaacaataaggaactccaggct
cagagcaaagttaaggttcctcataaaaaaaaacgtgtataagggAAGAG
AAGAATTTTTGCCACTTATGAATCTCTTGAATCTTTCGTTTGAAACTGTT
ACAAGCCTTACAATCATATAACAACAAAGCTATTAAACTATTCTTCCATT
TCAATTACATAATAGaacaaaaacgaaagaaaaaattaaaacgaGCCAAT
CAGAACAAAGGAAAATACAACGCAAGCCAATCATGATGGATGACAGTAGT
GATGATGAACGAGAATCATTGGCTGGTGAAAGGTCACATGACCCATCAAC
AGTCTTCGCAACAATGATTAAATTTGATTTCAATTACATCACCAAGACAT
GGATAGGACGTGTCAAATTAGCTCAGCTCATTTGCTGCATATTAGCAGGT
TGTATTCTCCCAACAACAATAGCGTTCTATTTCACACGTTTCTCATTCTA
CACCTTCGTCATCTGGACATGTTTCATGTACATCTTTATCGATCTCCTCA
TCCACGTGACCAGCATCGCAAAATTGGCGCCCGACTTTTGCCGGACCACC
GATATCATGATGTATCCGTTATTTATCGGTGCGTTAACACTTCTCTTGAG
TGCTTCATTAGTGGCTAGCGTAACTGACATTCATCATGGTAGCCGAGCAA
CGCGCATtggattttcagcattttttggatTGATCCTAATGGCCTTATTC
TTGTTTGAAGCCTTTTTACAGTACCGTCGAGCACGTAACAACGGTGTAGA
GCCACCTTTGTTTAGTTTCTCATTGCCAGGAAGAAGAGCACCCACTACTG
ATATTGACGCTGAGAACGGAAACATTCCCGCTGGACGAAATATTGTAATT
TCAAGACCGACATCCCTTAGGGCCGTCGAGGAACAACCACCACCTTATAG
TAAGGGAATGGAAGGGGCGGACAAAGGTGGCGTCGCTGTGCCCCTTGGAT
CTTATGGTGGACAGTAAACTTTCCAATAATTATTTGCGTGATCTCATCAA
ACAGTACCTTACATAGGAAAtgcagaaaaaattattttcaatagagcaaa
atatgttttaaggtattaaatcaaatataaacttgtacagatttttttcg
aagattcgTATTCGTGTAATATTTACGTATTCACAATTTGGACAAattgt
caacaacaacaatTTTAGTAGAAAAGATGATTCTTTAAAAGCAATTTAGT
TACCCATTATAGGATATTATGATAATACCACGTAAtggactcttccagaa
aaaaattgaaaatggggAGGGGAGGTGGAGGATATTTGAATATTTGGaaa
tttgccccccccccacggacattttgacttttgacccccgggCAGCAGGT
ATAACCcaccggacaagcatcagttgacccctggacattcaaaagtaccc
tcaaacagagcaatgTTACCCAAAAATAGAGTATTTTTACCCCccagaca
aggcaaattttgtagattttttactACCCCCCGGATACTTTATCCTCCAC
CttccatgtacggacattttttAGAAGAGCCCAATATGACCCTTttgtaa
agtatttttttgaatGTATAGAATTTTTGTATCATAGTTTGAAATTACAG
CCTTAGCGTAAatataaattcaatttttcttaaaaactaattgagatata
tttttcaagCCCTGCTAAGGCTAATAAAGTCCCCAAAATAGCATCATTGG
ACACCAATATCCAATAAAGTAACCCCCTGTTACCGACACAGTTAAAAGGA
TTGAGTTTTTCTGATCAGAAATTTGTATGGTGTATGGTTTACAAATTGTA
CACCAGTCGACGCAGAATTTCATGTAGATTCCAAATATGCAATAACAACT
TTTGTTTTAAGTTATGAACTTTGACCCTCTACTGCG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00005731	TCONS_00005731	Clytia hemisphaerica	transcript
TCONS_00005732	TCONS_00005732	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00005732-protein	TCONS_00005732-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000059	supercontig	sc0000059:313731..319616 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23	0.02	0.23	0.1	74.71	52.11	37.32	34.56	12.97	14	4.6	3.95	5.86	5.82	8.69	9.04	20.04	20.28	2.03	2.11	19.79	19.5	13.33	19.38	24.01	24.33	35.3	33.85	20.52	21.8

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XLOC_003251 (gene) - C. hemisphaerica