XLOC_003261 (gene) - C. hemisphaerica

Overview
NameXLOC_003261
Unique NameXLOC_003261
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000059:37742..44937-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003261 ID=XLOC_003261|Name=XLOC_003261|organism=Clytia hemisphaerica|type=gene|length=7196bp|location=Sequence derived from alignment at sc0000059:37742..44937- (Clytia hemisphaerica)
GCAAGTTTCTTTAAAAAAATAAAATAAAATGGCATCACGATTGAATTTTC AACAGAAAATCACTGCATTGAAATCGAAGAATATCGATCCATCAAAATGC ACCCAACGAACATCATTGTATGAGCAAATATTGAAAAATCCAAAATCCAC CATCGACAAACAAAACCGAAAGTTCAACCTCGGGAATGGTCAGCTATTTA CCGACCCTATTCTCGCCGCTGATCAGCTTCTCTTAAGAGAATATGCTGAT TCAGCACTATTCGACACCAATCGCCACGACCCTATATATATTCCCCCAGT TTTTCAATCACACCAATACGCAAAGAAGGATTCAACCGTGCATCTCCTCA ACTACGATGTTGACATAAACACTCTCAAGAAATGTTTGGATAATTTGAAG AAGGATTCGCCAGCCTTTTGGTTTACGGGAGAACTTCAAGCTTTCTATGA TCTCCAATTAAACAACTCTGGCGGTAATGAAATCAACGCAAAAGAATTCT ATAATTGGATCTTCAATGTCCAAATCATTTATCTTTTGAGGGAAGAAATT GCCAATCAACCGATCCAAAGTTATTTCAGAATGTTATTTCTATCACTCTC AAATTTTTTCTTCCGTCAACCAATTACAACCGACCTGACTTTACCATCAA CAACAGAGGATAACAACAAATTCATCCAAGCATGTATTCAGGAATTGGCT TCAAAATCACCAGGATCAAAACTGGAACAAACTCTCAAAAAGGTAACTAT AAATTTCGATTGTCCCGCAACAGACCCAAAACGCCTATTTTCATCTGTCC CGCTTTGCACCTAAACTAGAAATATGACACACCCATTCACTGTCCCGCTT CGTACCCAAACTAGAATAACGCCACACCCATCCACTATCCCGATTCGTAC CCAAATCGGAAATACACAACGCCCATCCACTGTCCCGCTTTGCACCTAAA CTAGAAATACACCACATCCATCCACTGTCCCGATTCGTACCCAAATTAGA ATAACGTCACACCCCTCCACTGTCCCGATTTGTACTCGAACTAAAATAAC GCCACATCCATCCACTGTCCCACTTCGTACCCAAACTAAAAATAAGCCAC ACCCATTCACTGTCCCATTTCGTATCCAAACTAGAAATACACCTCATCCA TCAACTGTCCCGCTTCGTACCCAAATCGGAATTACACCACACCCATCCAC TGTCCCGCTTCGTATCCAAACTAGAAATGCACCACACCCATCCACCTACA CCCATCAACTTTCCCGCTTCGTACCCAAGTCAGAAATACACCACACCCAT TTACTGTCCCGCTTTGTATCCAAACTAGAAATACACCACACCCATCCACT GTCCCGCTTTGTATCTAAACTAGAATAACGCCACACCCATTCACTGTCCT GCTTCGTACCCAAACTAGAAATACACCACATCCATCAACTTTCCCGCTTC GTACCCAAATCGGAATTACACCACACCCATCCACTGTCAAAAGAAGAGAA GAACAGTATAAATCTTGGCAAAGGGGTCAGTTCACCAATTTTCAACCAAA TTAGGAAATTCTTATTTGGCTGAAGCTGTGGTATGTCCAACCACTACTAG TACTTATATGTATTTCTAAACAATCTTCCCGTGTGTTTGTCTGTTACTTT TAGAGGATTTTAGCTTTATGCTATCAAATTACTGTTAGTTAGACCATGTT CAGACGTCATAGATTTGAATCGCTTTGGTATGGTTTTTGTAACGAAAGAG ATGAGCTCTGTTCGATATGTTTTACTTTGTAACGTCTACCTTTTTGACGT TTTGAATTTTGACGTTCACACAGTGTTTCGGAGCGTTTTGTTTTGGAGCA AAATGGATCCGTAACGTCTGAACATAGGACTGAAAAATAGGTGCATATGA GTACTCTTTTGAAAAAGGGAAAGATTACCACTGAAATGAGGTTGATAGAC AAATGTCATTTAGTTGAGATAATTCGTATTATCTATTTCGCTCACTGCCA AATACGAGTATACTCGTAGAAGGGTAGAAGGGTCAGAATAACGGTAGTTT TTGAAAGAGTATGTAGCTTTGACACAGAAATATCTTCTTTTCTTTCACAT TTTTAATATCGATGTCAAATTCTGCGTCGATTGGTATACAATTTCGATTT AAAGTTATTTGAGGATTAATTGAAAATTAAAATAAGAAAGGAACCTTCTG TGCTCTGGAGGTGGAGTATGCACAATATTTGCATGAGACAATCACGGCAA AAAGTAACAGACGTTAAATCGCGATAAAAAAAACAGTTTTCGTCTAACAG GCTACTGGATGATGTGATATTTTATAAAAGATATTGCGGTCTTTTACGCG AAGAAGAGTTTTGTACTTGACAAAATGAAAAAAATTCCAGTTAATTCTAG CTTGAAGGGAAATTCCAGGGACAATCACGGCAAAAAGTAACAGACGTTAA ATCGCGATAAAAAAACGGTTTTCGTCTAACAGGCTACTGGATGATGTGAT ATTTTATAAAAGATATTGCGGTCTTTTACGCGAAGAAGAGTTTTGTACTT GACAAAATGAAAAAAATTCCAGTTAATTCTAGCTTGAAGGGAAATTCCAG GGACAATCACGGCAAAAAGTAACAGACGTTAAATCGCGATAAAAAAACGG TTTTCGTCTAACAGGCTACTGGATGATGTGATATTTTATAAAAGATATTG CGGTCTTTTACGCGAAGAAGAGTTTTGTACTTGACAAAATGAAAAAAATT CCAGTTAATTCTAGCTTGAAGGGAAATTCCAGGGACAATCACGGCAAAAA GTAACAGACGTTAAATCGCGATAAAAAAACGGTTTTCGTCTAACAGGCTA CTGGATGATGTGATATTTTATAAAAGATATTGCGGTCTTTTACGCGAAGA AGAGTTTTGTACTTGACAAAATGAAAAAAATTCCAGTTAATTCTAGCTTG AAGGGAAATTCCAGGGACAATCACGGCAAAAAGTAACAGACGTTAAATCG CGATAAAAAAAACGGTTTTCGTCTAACAGGCTACTGGATGATGTGATATT TTATAAAAGATATTGCGGTCTTTTACGCGAAGAAGAGTTTTGTACTTGAC AAAATGAAAAAAATTCCAGTTAATTCTAGCTTGAAGGGAAATTCCGATGA AATATTATAGACCCGGACGATTTGGAATCACTCTAACTTAGTTTTAACTC TGAGTTTTAACGCTAGACTTTAAACTTATGACCCTAGGATCTGAGAATCC AAAAGTTTAAAGGTCTAATAAGGCTCAGAAATAAGCCTGGCAGTCTACAG ATAAACTCCTCCCAAATTGTGAAATATTTGGTTACATTTAACAAAAAGCC CAAAAGCGACTTTCGCCCGATCTTCAAATTTCGAAAAACGATAGAACCAC TGAAATTCTAAAAGATTTTGGACACAGATTGTAACTCAACCGAATTATTT AGAAAACAATCAAACTTAACAAAGTTAAAAAGTTGAAAAATCATTTTTCA ATTTTTTTGTCAATATAAATAAATCGGCTATATTCAATTTAATTTGAAAA ATTTGCTAATATCTATCCATCTCTTTCAAAATCTAAAACCATTTTAGGGC CATTACCAAAACTTATCAAGATAGAAATTCAAAAAACATTTTACAAGTTT GTTAATTAATTTTCCTTCCACAAAAAAAGCTCAAAAACTTTATGTTATGC ACGAAAAAAGCTAACTCGATAAAAGTTTTGTGAAAAATGAAATTGATATA GCTAAATGGAAAAACTTTTGCGAAAAAAAAATTCTAGTTTATTGTTACTC GGAAATCCTTTTTTGAAAATCAAAAATCGAATTTTGCAGCGCTTTCATTC TATGCAACTTGCCAAACTAAGTGTAACAGTCAATGGGTAGGGCGCAATTC CAGTTTTGGTACGAAACAGGACAGTGGATGGGTATGGCATAATCCTAGTT TTGGTGCGAAGCGGGACAGTGAATGGATGTGACAAAATTCTAGTTTGAGT ACGAAGCGGGACAATGGATGTGTGTAGCATAATTCTAGTTTGGGTGCGAA GTGGTACAATTGATGGGTGTGGTGTATTTCCGATTTGGGTGCGAAGCGGG ACAGTGGATGGGCGTTGTGTATTTCCGATTTGGGTGCGAAGTAGGACAGT GGATGGGTGTGGCGTAATTCTAGTTTAGGTACGAAGTGGGACAGTTGATG GGTGTGGTGTATGTCTAGTTTGGGTACGAAGCGGGATAGTAGATGGGTGT GGCGTAATTCTAGTTTGGGTACGAAGCGGGACAGTTGATGGGTGTTGTAT AATTCTTGTTTTGGGTACGAGGCAGTACAGTCAAAAATCGTCGTCTTGGG CGTAACGCAGGACAGTCGGAAATAGTGACAGATAATTTTTTGGTCTCTAA AATTGATGAAGGGCAGGAAGCGGGACAGTCGCTCTCACTGTCCGGGCTAT ACCTATAAGTACAACGCTAAGCCGACCTTATCCGGAAAACTGCTGTAACA ATCCTTTATACTAGCAGAGACCCCTGTTTGTAATAAAATCTCTCAAATTG CGTTATATACTTTTTAAAAAATCTCATTTTATTTCCAGACGTTAAGAGAC GCTAAAAAAGCAGTCAAAAACTTGGTCGAACAAAACCAACCATCCCATCA TACAATAAAATGGCTTTTCGGATTAGTGCTATCGGAGCTCGGTGAAAAAG GAGAACACTTATTCTTTAGTAAACTCGATTCCCTCAAAGACGACCCTGTT CTTGAAGATACTGTGATTCTCAGTTCCATCAACTTTCTCACCAATGTCCA AAAGAAAATGCATCAGGAGATTGATGTCCTTATTTTCTCGTGGACCAGGA AATTAATCATAGGCGTTGAAATCAAACGGACACTTACTGGAAAAGCTTTT GACCAGTTGGATAAATACCATAAATTGATAGAGGAGAAATTGAGTGATCA GTTAGGACATGGCTGGACTTATCATCCAGTCATATGTGTTGAAAGGGATG ACCTTTTCTTCAACAATCAACATTACATTGATCAAGAAACAGATTTGAAA TGTTGGTTATCCACCGTGTTGGCAAAATATCCGACCGTTCCCTCTCTCAT CCCAGCATTAAACAAAGTTAAAGATCTCCTAAGAATCGTTGTGTTTGCCA TTCATGCTTCAAAAACAGCACCCATTACCACATCAAACTGGGTGGAGTAT ATCTCGCAAGCCATCGATACCGTCTGCACTACTGACAACATACTCTTTTA CAGTCAGCGCCAACTTCCCATCATGAAGACAGCCACTTCTGAATTCAATA AGATCCTCTTTTATGCCCCTTACGGATGCGGCAAGTCTTTCATCCTTCAG GAGAAAGCAAAACAATTGAGTGGAATGACGGAATACAAAGGACGTGTTAT GTATGTCATTGAAAAGACTGATGATTTAGAAACCCTTCTTGAGTGGAGAT TGAAAGACGAATTGGGAAACGAACATGGAGTTGACGTCTATGGATACAGA TGTTACGTAAGTTGTATTTTGAGTCTAATTTTGAATATTTTTGAAAACTA ACCAAATAAAAACAATATGAAAAAATTCTAGTTTTTAAGAGGTTTTCAAC AATTCATAATTTGCTTTTTCCATTATCTTTTTCCAAAAAAAATACCGTTC AAATTTGCTGCAAGAGTGAGAAAAATTTTACTGTTTCTATATGAACATAC GTGAACATTTTAATCAAAAATGAAAAAAAAAAATAATAGTGCACTGTTGT GATCTTTTCCTTCTAATGTTACTGATATTGTTAAAAAAAGTTAGAAACGC GCGAATGTTCGATTTGGTCGTTCACTTTTCCGTGGCAGATTTTCCGTAGA TTTTTTGCAACCTCGCATAATTTGACTCTACTTTTGAAGAGAATTACTTA AAACAAAATTTTTCTTTCCTTTCAAACAGTTCGGTTATGAAGAGGAGAAT AAAGAGGAAACTGAAAAGCTGATGAAGAGGATTCGAACAAGAAACATCAA CGCATTATTCATCGATGAGTGTGATATTTCCGATAATCAACTGAAAGAAA TGATAACGAAAGTCAAACAAGACGTTGATGTGATTTGGATTGCATCAAAT GGATACGGTCATCGGGAAATTTTATCAAGTTATGAAGTTCTTTCGATGTA TGACGATTTCATGAAATATGAACTTGACGTGAATTTAAGAAACTGCAAAA GTATAGTAAAAGAGGCATTAAGCTTTGAAGAAAGAGAAGGTTCGACATAT AAAGAAGGTTTAGTACTTCCACCACCGAATCATCCTAATGGAAAACAACC CTACCATTCCGACTCATTTGAAAACGGCATCACAGAAATGAGAAAGATCA CGAACGATGGAGTGCTAGTGATATCTGATATTCTATACGAGAAGGATGAT CTTCAAACATTGGACAAGATGAAATTGAAATGGAAAAGGTATGGGCAAGA TGAAAACGATTTTAATGGAGGTGAAAGTCCATATCAACATCTCGTAGACA AAAACATTTTATTGATTAACGACTATGAACTTATTTCCGGTTTCGAATGG AATAACATCATCCTCATCATAAAAAGAATAAGAGGAGTTGTTGCTCACCA TCCAAGTAATCGGATCATGAGATGCACGACAAATCTCATGATTGTTGAAC AAAGACGAATTTTCTTCAGATGAAACCGATAGTGATCTTCAGATGATTAA GTTTTACCAAAATCTTAAAACATAAAAATCACGGTTTTGATATCTGATTT TTCATATCTTGTTCACAATATTAAATTAATTGTCTTTTGTGTTTTATTTG AATTTCATGAAAAATCTAGAATCTTTTCTCACAGTCTTTCTCGATGTGGA CGAAATATCCTCAACAGCCGAAAATTAGCGGTAAAACTTATGATGGTACT AAATAATATGTTTCAAAATTTCTACCTAAATTTTTACAATATTTTTGAGG TTACTTAATCAATAATCCATGTTAGATGGCCCGTCCATGCTTTCGGCATT TTGTCTTATAACATTTACTTCGATAAACCCTTTGTCAATTTATTCATTTT TTAAAACTACTTTTAGCTTTAATAGACTAATTTTATAACCCATATCATTT CTCTTGTACACTTATATAATAGCAAAAGCACCGTTATGTGTTTTTATTTA AGAGAAATTTTTCAAATATTAACGGTATTGCTATTTAACTTTTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005748TCONS_00005748Clytia hemisphaericatranscript
TCONS_00005747TCONS_00005747Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005748-proteinTCONS_00005748-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059supercontigsc0000059:37742..44937 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18 0.03 0.02 0.07 5.72 4.18 3.37 3.45 1.72 2.58 1.56 1.58 2.32 2.07 0.67 0.67 0.63 0.5 2.83 2.08 0.73 0.66 0.32 0.5 2.94 3.32 1.29 0.97 1.18 0.95