XLOC_003335 (gene) - C. hemisphaerica

Overview
NameXLOC_003335
Unique NameXLOC_003335
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000061:387866..393777+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003335 ID=XLOC_003335|Name=XLOC_003335|organism=Clytia hemisphaerica|type=gene|length=5912bp|location=Sequence derived from alignment at sc0000061:387866..393777+ (Clytia hemisphaerica)
TTGTATTTCCACTATATCTCTAGGTCCATTATAATGGGTTTGTGACATTC AGTTTAACAACAGTCCGTGCTATCAACACACTCCGTTGTCAACAGCGACC AAGTAACACCGAAGATTTACTCCCTGTTTACTGGGCCAGCTATGATTTCG GAACAGTCTTTCAATTCAAACACAGTAAAGGGAGACCGAACCTCTCATCA AAACAAATCAGATCACTTGCAAGAGACCTGGATCAGACTTTTGGAGATAG AACAAACGGTTTACCTATTACACATCGAGATCACATCACAGCTGATCAGA TTCAAGAGGTCTTGGTGTTCACGTGGTATGATATGTACGCCAGGATCAAT ACCCGAACGTTACAGGTACGGTATATTACCAGGTTTTTATACCATTGGTT CACTGATTTGTTCGTTTCTCCTTTGGTTGTCATGACTCATAATTATTGAT TCAGGTATTCTTTTAAATGAGCTTTGAAAGAAGAACTTGAATCTACTCCT CGCGTAGTTTTCTCAAATATGCTAGCATTGCGATAATCCGAGAAATCCGA TCCgattaatttaattttattattgaattttttatttttgtttacttcCA TTCACAGAGGAAACGCCACCGCTTTCAGTTGCTGATCGTCAAAGTGCAAA ACGAGCGAGGAACATATTTTTACGTCCAAGTGTACTACGCGCAGTTAGAT TCAAACGGAAATTGGGATCCCGCCGTCACTTTCAAAGATCAACAGTGTAA ACAAGCTCAGGTAAGTCCCTAACCTTTAATgtacgttaaaacaacgttgt atgaACTTTGAAACAACAAAGTGGGTCAGGTGAGTGGCATTAGTGCCATC GGAAAGTTGGGTTCTAATTTTACATGGTTGAATAATGTCAAAAATGGTCT TATCAACTAAGATTATTATAACGTTGAAATATTAGTCTCTGGTTTTAGAA CCTTAGACATCTTGCCCAACCCCGGACCCCactttgccccttgaaagatc gaaatttggtcaaatcatTTAAcacaattttccttttttcctccTTTTTG GTCCCGTGAGGGTCCGTCTgtccgtcagctcgcaaccccaGTGCCCGCCT CGGTACGAGGTTAAAGCTCAAAATCATTACGATATAAttatttgtttgtt gtttatgtGGTTTCATTATTGGTTCGTGACTTCTCGAAAATCGAGACAAA TAAAGTTCGTAAACGGTAGCTATGGGATAGCCaaactgtgtcataaaaat gtcGTCAATAATCGAAACTACGTTTCAATTTAATTAACACAATTCTATTA TGTCATGATTTTCGCATTGTTACATGCTCAGATAAACAGGGATTATTGAT TGAAAGTTTCGAATTTGATTCCAATTGGTTTCTCATTAGCTCGTTGATGC ATTTTTGGCATGAAATCCTCTtgttataccgggtgcgccacaaaaagttt ctctctttaaaactaattttcccgaaatctaaaaattttaaaagaaccat tcctattcaaTTGGAAAGAAGATATATAAACTTAacttttgatgggtcat ttattaaattcggttcattagatcgaaagttatatgctctattgaataaa aaagttactttctgaaagtgctcaaaaacgatTAAAATCGACCTATCGTT GTTTGATGACACAGACTACGTGGAAGTTAGCATTCACTTGATATTATCAG TTTCCAGGAACTGTTTGGTCCCTCTTGTCCCCATAAGGCTTTAACTTTTT GCTGTAATGATTGAGCCAGACAACCCAGCGGGTGTACAACGTTAATCAAA CGTCCATAAAACGTTAGTAGTTAGATGAAACAACGATGTGTGCCAGTTGA TATACACTATCGCTAGCGTTTAAACTAAATAAGGCATTATTCAACAAAAA CTACAAGCAGATGTCTTCTAAAAAGAGAAGAATCGCGTTTACGTTTACCT TTTCAAACAATATTCTAATTTTCTTGTTTCCTAACCGACCTACCTGTACG TAGATAGATTGGATCCTGTTGAACATTAGACTTACATTTCTTTCGGACTG NACGTAGATAGATTGGATCCTGTTGAACATTAAACTTACATTTCTTTCGG ACTGTTTTGTTTGAGCGGGGATTACCGGTTGGAAACGAGCTGATAtctct attttttgaaaaggaaaaattagtGGCAATGAAATATACCTAGAATGTAT TTAAATCGTTTGGAGAAATGTACTCACACTCACGAACTTTAATATTCGAG AAAAAATCGTTTGCTTGAAGCTTGAATtttctcaacaaaaaaaaaggaat tggAAATCGAAGTTTCCAAAATGTAATACGCTGTCATTGGGTTAAGAAAA GCCACCATACCACGACCACATCAGGGTTTTGAGTCTTTCTCTTATGTGAC CGATactatcccagctggcacacaacgttatttcaacgtccaTACAACGT TCACAAcgcccatataacgttagaagaacgttaaaacaacgttgtgtgcc agctgggattgtAATGGCTGCATTTTCGGACGTGTCATTATTGATTTATG ATATTATATCGCAAGATACACATTTAAAACGCGTGCCGGGTCATCAACGC GACCAACCGGAGATACATCAAACTTTCATTAGGCTATCCGTTTCCAGATT TTCAGATTTAGATCTTTTTTAGCATAACATGCCAAATTTTATTGCTTGCC AATCACAAAAGTTGCTGAGGAAAATACGTTTGACTGAATAAAGAAATGAG AGGATAGCGTCGTTCGTTTTCTGATCTATTCGAAGTCGGGAAACTAGTTT TGTAAATAACGCCCCTTTATGTTGATTAAGGGAATTTTTCTGACCAGCTA AAAATATATCTATGTTTTTGATAGAATTGAAATTAGCTAAAGGTCAAATA GAGATTATATTTGAGTGGAGGTCAAACATTCGCTGAATTCATACTATATC ATATTTAAAACCTTGGGTCTACCATCCAATGCAAGAGTGTTATGATGTAA TGATGTAATTTTTAATGTTAGGGTGAAGACACTCGACTTTAAGGGTCTTT TTGTGGGGTAGGGGGTGTTATTAGAGAAAGATCCAATATTTTGACAGAAT GTATGCTTAAAATTTGCGGTAGTAAAGgttagaaatttgaaaatcaattt tttgtggaAAAAATACGTATGTTTCAAGAAAAAGTGCCCGTAAATTTGTA TGGACACATCTTCTCCCACTAAATTAGCTTATAAATTCAAGTGCGATATT CAGTATGCTCtcaacaatttttcatttttatcgatAGTTTGGAGTTGGCG TTGAAACGTTTGCCAGATTCAATTTCAATGGAGTGTACAACCCTGGCTTT CCATTACCAGCCATCGCAGAATGTGTTACTAATGAATATCCTTACACTGA TCTTGGTAGTTGGGTCTTTGATGTTTCTGACAAGAAAGTCAGTAAGTAAC GTTTATATATTTCAGATTCCCAGGAGAAAGTTTAATTTCACTGGTTAATT ATTAGATCTGTCTTTGAATAAATGTTTTGTGGTTTTTCTGAGGAAATACA TGATCTGACTTTGAATTGGGTCGTGGAACGTAGCTTTTCCAACGACTTTC TATTCTGCATTTTTTGTCTTAGCCTTTTAGAATAACAAGTCTGTATAACC ACATTCTAAGATCCCCAACGTTTTAGGTTATTCTGTTTCTTTAAAAACTT ATGTcactatttttctctttccAGCAAACCAACCTGTTCCACCGAGCGGT CGATGTGATTCCAAATTCGGTAGTTTAGATCCTAAATGTTACTTGAAAGG ATTCGCCGAGAAAAAACGAGAAGGAATGAAAGGAGTCGTCGGCCCAACCG ATCCACCTAAACCAACAACAATGACAACGACAACGACAATTCCACCGACG AAGCCAACAAAAACAACATCGACGACAACCACAACCGTACCGACAAAACC TACCGAAACTtctacaacaacaaaaacaacaacaaccattGCACCGACGA CAACTACTGCATCGACAACAACGACTGCATCGACAACgacaacaacgaca acgacaACGGCGACGACTTCTACAACTTCGGGACCGACAACAAAAACCAC TCCAATGGTCATTACTACGGATCCGATTGTTGACGAAAAGGTCCGACGAC TAGCAAACAAATTCTGTAAAAACAGAGACGCAGGATTATATCAACTGCCA GTCATATGTGATGTTTTCGTCTCCTGTTCACTTGGAAGTGAGGCTGAACC CATGGTGTGCCCTGAAGGAACTAATTTCAACCCTGAATTCAAGACTTGTG ACCACTCTGATAATTTTGAATGCTTCTACGATAATGTGACTTGTAAGTTG TTTTTCCGAACTTTTTTCTGTCTTTCGCGATTGTTTGATTTCGCCCAAAT AGTATCTAATTCTGAGTTTTTTGTTTTCTGAAAAGGGGTTAAATAGGAAT GGGTATCAGGGTAATCATCAGGACCAATTGAAAACTCGTTGGAAAGGTAT TTTTGAGTATGTTATGTCAAACTCCTTGTATTTCCTCGCACTTTCAGATC ACATATTTCAAAATTcgtctttgaaaataattaaaagtagttaaactaaa atatttagtagttcaaattttgaaataattgaaaTTGTCTAAAACATTGG ATTTCGTCCAAGCAAACACACAAGGAAGAAGACATAAAGCTATGAGCTAA TGAGTCAATTAATGATTTCTCATTGAATCTAAGGGGAATTTTAATGAGAA TTCTATTACTTCCTAAATTGTCTTTCCTATTTGAGTTCGTAATCATTTCT TTTCGTCGATAATTAGTCCGTCCGGGTCGATGCTTTACAATATATTGTGG AAGATTGCCACAACGAAAGCGCAGCAATACACCCCCCCCGCattaaatgt taaaaaattgatttttgtggcaaaataTGGGTGTTTCTAtacaaaagata ttcaaaaataaCACAAATAAGGTTGAATTAGGAAAAATTGAATTCTAAGT TCTATGTTGGACTCCTCTTTTTATAGACTATGTtataagacgaatcacta tctaagaaaaagcccaaagccgaagaaaattcgcaaataggtttttttgc cgaaaagagtttacagtcggagAGTtgccgtttcttcgaaactctcccgc cgattttttcccgtATACCACCCATAACGctataccgccatattttcccg cctttactattactgtaacggacgataacatcgtctactcTTTTTAATGA TGTAGAATGCTGACAAACTagatcacgcaaaaaaattccTCGAAAATCTT CCTCACGCGTTGCCGAAAGGGGAAAAATGttatctttcttttgtttacaa atgctgtgtaagcaaatggtaggagataaATGATGTCCTTTAAGGAAAAG ATTCTTCCATATTAAATAAAGTATTAGCTGATCAGAGAGTAAACTATATA TCctgtcttttttcttttgcagTGACCGAACTAACCAACGTAACAGCGCC ACCACCTAAACATGACAACCTGTGTCATTTCCTTGGTTTCGGAGAATACG CAGACCCGAATTCATGTGATAAATACTACGCTTGTACTAACTCACGTTCC ATATTAATGCCTTGTCCAGCTGGTCTGCATTATAAACCTTTAAACGAAAC GTCTGGTATATGTGATTGGAAACGTAATGTTCAATGTACGGGAGAAGGGC GTAGACCACCCACTTCAGCGCCCACAACTACGTATCATCCACGGAATCTA GGTCATCGataaatttgaataatttaCTGACCAAAAATACGAGATAATTA CTGTGTATAACACGTATGAAAAACCACTCGCTCGCTTCAAAAGCTCATTG GTTTGAAAATTCAACGAAACTAGAAAATCTTCTAATATAAATAAGATATA TATTTATGATTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005844TCONS_00005844Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005844-proteinTCONS_00005844-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:387866..393777 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.55 3.57 1.14 0.85 0.57 0.4 1.32 1.01 0.65 0.78 1.63 0.81 8.64 4.32 27.06 9.41 7.95 16.62 0.17 0.34 0.86 1.16 3.58 2.87 2.25 1.72 0.9 0.68 2.64 2.45