XLOC_003566 (gene) - C. hemisphaerica

Overview
NameXLOC_003566
Unique NameXLOC_003566
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000066:149269..158606+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003566 ID=XLOC_003566|Name=XLOC_003566|organism=Clytia hemisphaerica|type=gene|length=9338bp|location=Sequence derived from alignment at sc0000066:149269..158606+ (Clytia hemisphaerica)
GATCATCAACAAAGGGGACTGGAAACTGAAAGAGCTATTTGAATTATGTA CCGTCGTGTACGCGGCAAATAGACCGAAAGCCGTAAGTAGACTAGGTTTG TACGCAGACTATCTTCCCGCCATTATGGATAgaatgaaaaacatcttttc atcaaaaatatcgAACACACTTCACGTTCAAAACATTCGATCTGGAAGTG GGGAGCAAAAAATGAGGATATAAAGCTTTTAAAGATTTGTGTTTCATTTT CAGTCTTGCATGGCTACTTTGTAGCTTTTGTTTAGCTCCTGATATGTTAC CAAGTCTTTCACTCTAATTTCCTAAGGAAATTATGAGTAACTTTAGAAAT AATGGGCAAGTCATTGTTGTTTCCGATGAAAGCCCAGTTTCATCAAAGAA GGGCACAACAACCACTACCACAGCTGCAACAAACAACAATACCAAAAAGA AAGATGTAGATAATGAACAAGAAAACAATGACTCTATGTACGATTACAAA ATAACTGCCCATGAGATACTACGTTCGTCAACTGGGGAATATGAAGTTCT TGAATTTCTTGGACGTGGAACATTTGGACAAGTTGTTAAGTGTTGGAAGA GACATACAAATGAATTGGTtgctgtcaaaatttcaaaggatCATCCTTCA TATAAAAAACAAGCAGAGattgaagttaaaattttgagtttgcTGATGCA AGAAGATTCAGAGGAATTCAATTTTGTTCGAGCTATAGAATGTTTTTCTC ACCACAATCACACTTGTGTTGTCTTTGAAATGCTCCAACAAAACTTGTAT GATTTCCTAAGAAGTTCAAAATTCAAGCCTTTGAGTTTAAAATATGTGAG ACCAATTTTATACCAAGTTGCAACAACCCTTTTAAAGTTGAAGCAGATGA ATCTTATTCATTCTGACTTGAAGCCTGAGAATATTATGTTAGTTGAACAA GAGCGACAGCCATTCCGAGTAAAAGTTGTTGATTTTGGTAGTGCAACTCA CACATCTAAGGCTGTCACATCAAGCTATCTTCAAAGCCGTTATTATCGGT AAGATTTTATtatcataaattttctttttgaaagggCCATTCCAGGAAAT TTGTGTTCCCCCCTCGGAcgaaatacattttttatttttttagtttcgCA AAAGACGttgctgtttttattttgattgtcttgtaaattttgaatttttg tttaaaactttTTCCCTTAGAAATTCTGTATCGTCCGCCCctctgttaca gacaaattttGGAATGGTCcaaagggaactaatttttgcagaatagacct tttttcaaagaggccaccctgttgaataattatgtagtccagcagaaaaa caatgataaaaccatgcataattattacaatatgcatgatacagtaatta tggatggctctatcattgtttttatggctggactatttaattattcaaca ggacgtcctctttgaaaaaaggtctattcttttGGTGCAAGAGATTGAAA AAGGACCTAACTTTTTGCAGAGCTTTTTTATGCCATTGGAAGCCACTTtt gtcaaaattcttttttttttccttagggttaatttaggaaatttaagcaa aatttattttgtgggAAACTTAGTTTTTTTTGTTGCATACAGTACAGGGG AAAAATCCTGGGAAAGTGACAAGAATATAAGTGCGGTAATTGGAATCTTA TGCAAAAGGATAGTACTTAAGTAGTGGTTTcggttaaaatttgaatttct gtAAGGactagtttttgcaataaatggccaaaatttacagaaatcatgaa aattaaTCCCAGCTTAATATGTAAAGCAAATTTGCAGATTCAAAGTATGA TATTTTTAAGCTAATCCTGATTGTGTTAAAGAAGCCTAAAGACGTAATgt ataaattttgtgaaaaaaccttgaaaactttttgaaattgtgaCTTTCAA AGTAAATGTTTGTGGAGTactttttgagaaattcaagatttcaaattttg tgatTTCACAAAccctttttatttcaatttatttaaaaagGCAAGAAATT GAATttgctacacgcttttttttataagaaatatgtaaatctatttcatc atgaatattcttatttttttggtccAAATCATCATATAATGTTAACATAT TCTTAAGgtaaatttttggattttacaaGTCATAGTctcaaaacattgaa aagtaATGTAAAAACTGAAGACTTATgcatgaaaaaacaaaagaataaat gcaatatatttttaaatagtacaaattaaatgaaatagaaaattaCAAAT ACAGAAATATATaagttcataaaaaaagaattaaaaattttcatgatgac aatattcttacaatattcttaatttttggccattttcatcatggacattt tgataaagtttattcttattaaaaaaaagcgtgtaacagtGATTTCTAAA ATCTACCTTCGAATACGATTCTTTTGACAATACTGTAAATGATCATGCAA AAGGCTCCCAATGTTTTATCCTAAACTTACGGCATTTGGGACATGCAATA AGTTACAACAAGAAGTGACAAAGTAATGTAACTTTATTTCTGGGGTTTGA ATGCTAAAATTAAAATATCACTCTACTTCAGATTCAACAAGACATTAGCG AAAACAATGCCTGAGACAAAAAAAATGTGACAGACCTAGCTAAAAGTAAC AAACCATATTGATTAACATGAAATGATGCTTAAAGCATTATACTTGACTT GTTCAATGATTTTTAGTCTGAATTTGGTCACGTTctcacaaaaatattca aatgaaaAGTGATAAATTTTGGGAATTATCTTTTATTAGAAAAGCAtgac aatgaaacttttcaatatttcttCAGTGCACCAGAGATTATCCTTGGGCT ACCATTTGATGAATCAATTGACATGTGGTCTTTGGGTTGTGTTGCTGCTG AGTTGTTCCTTGGATGGCCTCTCTACCCTGGTCCAAGTGAATATGACCAG GTAATCggtctttggatgttttaacatcctgtgaatttgaattttcagNT CAGGTAATCGGTCTTTGGATGTTGTAACATCCTGTGAATTTGATTAAGAA CTTTAAAAACAAGATACTTGAAGAAAAGTGAAAGCCTTGATTTCTCAGGC TTCAAAGGAACATTTGATTTTATAAATTCTTTCAGATTCTTTATCACTAG CATAGAAAAAGACTTAAAAATACCAACccaaaattttgtttcttttctag ATTTCATACATTATCCAGACAGAAGGAATGCCATCACAATCATTGCTGCA TATGGCAGCTGCAAGTAAAAGGAACCGATATTTCAAGAGAAGCGTCAACG CATTTGGTCATGAAGAGTGGAACTTGAAGGTAGCTTTTTTAAATATCTCC AATAGTTAGCCTCCTGAGAGCTGTCCTGAATTCTAGGAAAATAAAGGAGA TTAAGTATTTCGAAATAAACATGTTTTGGTTATTCTTCTTCTTGTAAACC TGATATATCTAGTATTCACTTATGTTTCTaggtaatacatgttatttgat tttgatgttttccATTAATTTCAGTCTGCACAGGAATATGAACAGGAATC AGGACGACCTCGTAAAGATGAAGGAAGTCGAAGATACATCTTCAATAGAC TTGATGATATTGCTGAGGTATGAAATTATATTATTTGTCTTCTATTGATT GTCCCGCTTCGCTTTTTTTTCGTCTCTTTGATCTATAGAATTGATCTCCt ttttactgatttcttgaatttctttttcacataACTTTACTATTTTAGCG AAACTTTCCAACAAATTTGACTGGGACTGATTTGATGGCAGAAAGAGTTG ACAGGTAACATATTATCATGTCTTGATAAAAATGTTTGCAGGACGCAAAT AACCTGTTGTTTTATGTTATGAATAGGTATTTATAATAATagttcttttt ggacctaccccggtggggttggggtggaggtcctataaattaacctctgt ccgttcgttcgttcgttagttaccaacttttctcgagattggcacATTAg tttttttggcacaaagatgcataactataaaccctcgaatgcgacgatga tttttttgcatgaaagtaggtaaaagatggctcaagcatatttttattaa aaaagaatttttcagctcaaaaaacgcatctttatttaaaagaatcacta ttaataagcatacatcaatgttcttagccaaattactcaattttttgatg agatagatattttttttgctcacgaagtcttgaatatgaaagaATATTTC AAGAGCATGAAATTTTGGtttctaaacgttttttttataagaaacaaacg actaattttaatagatcgtcactatttgtgttctaaatgattgtttaacg gtcatgtcatgctcacgtagatatcaattatatatgtgttaaatgcataa ctaggtaggtccataaaagtatcacttgttaactTCATTTTTTTAGACAA GTGTTCATCGAGTTATTGAAAAGGATGTTGGATCTAGACGGATACACGAG GATCAAACCAGCTGATGTTTTGGGTCACCCTTTCTTCACTTTCACTCACC TTTCACAATTCTATTACTCAAGAAAGTAAGCAATTTAGCGTTACCAGTTT TGGCCTAGAATGTTTGATTCGccgaatctttgttttttttatatgaaatg TATCGCTCGTTAAATGACGGTATTTCAAAGtaggaatttcttttttatca ttGAACATTTTGTCCATTAAAATTCTTGTTTCAAtatatttgattgtttt tgacGACCACTGTTATCCTGATGGTCAATTAGAAAGTTCGATTGTAGACC AAAATATGTGACAACTGACTCCTTGTAAGGGAGCTCTCTCTTTCTAAATT ACTCGAATAACATTGTTTAACCTTGTTTACAAGCCCTTTAAGtcaaattt tgttcatttttcgtccaggtaggtccaataaatcACCAATAATTTCTTTT CTCAGTGTTCAATCATCTATTCACGTCATGGACACCATTGCATATTATAA AGCGCAAGCCCTTTCTCAACGGAACGCTACTACCATGGCAACGGCTAATT GTCGTGTTCAAGCCAGCTCTAGGAATGGTCACACCTCCTATTCCACTGTT CCCATGCCCAATAACAAGAATAATGTATATCAGGTGCGAACTTATTTAGT TTTGAAACCTACCGTCGACCCACTTAAGGTTGCACTTCCTGAACTAAGAT TCCTCTGACTTTTTCAGAAACGTGTCCACTCTTTTTTAGGGTTATCCCAA ATTAGTGCAAGGTTGCATCCAGGGGTGCAGAAAAATCAACTCCGTCCGGC TGAAAAACTGGATAGTTTTTTTATGCTCATTTTTCATCTATCCGGCTTTT TGGTCTTTTCCTGTCGAAGAGAAGCCAGCAAAATCTTCGGTCTAGGGGTG TTTCGACGAAAGCCCGAGTTCttcttgaagatttttcaagatttttatct TGTAGTATCTGGGTATACTGTATTTTATCAAACATCAAGTGCCATACTCC TTTCATCCATTTGTGTCTCTAATTTTCATGGTATATCTAACGGTGGCCAT TTCTTTATTCATTTATAGGGGCagtcttcaaaatattttgtgtaAGTAAA TTCAACCTTATTTTTCGTAAAATGCTGTTTGATAGCATTGTTATTTGCTC GTTAAGACTGAAATTTTCTCTCGATATGATAAAACTCAACTACTAATCGG ATTAAAAAGTTTTCCATTAAACGAATTACAGGATATTGTTAGTTTTTGTT AACGACATACTTGATATTCTAATAATAGAACACTGACATATTGACTTTTT GAAACGTGATAAGCCGTTACTGAACTAAATATAGCTCAAAGTTGTTGTTG ACTGCCATTTTTAGATTGGAAGACATTTTCTTTTTAAGGAAtttatctaa aaatagattttcccTTTCACCTCTTATAATTTGGAAAAGTAATTTAAAAT TCTCAATTCACCAAATTGTCATTCCTCAAAGTTAAGAAAATATCTCTCCA AGACACACTGAGATGCCGATTTTTGGAATGCGAAAAGAGGCTTGTAAAAT TTCCTCTACAATTCATTTCTACGACGATTTTGCATATCAATTTAATAGTC AGTTTCATATAGTAAAAAGCCACTCAAAAATGGTTTGATATCAGATTTCA CCCCTATTCAATCGTTTACTAAATCGCTTTAATCGATTCAGATGAGAAGG AGTTTTTATAGGATACTTTAATCtgctttaataattggtcatttgaagta ataaaaatgacgcgttctttagaaaaagtaacaaagttgttttattactg gttaacgaccaatcaaatcaaataagagcttgtaaaagctccaTCTCATC CCAATCGATTATTCAACTCCGACTTTTCAGGCAACAGGCTCCGCCACCTT CATCCATTCCAATGCCACCACTAGCATGGCAGAACGTCCCCGATGATGTC GGCTACGTTTCTGAAGAACGTTCTCCTATGTACCGTAGCCCCTGTATGGA CCCGTGGAACAAACAAGTTCCAAAACCGAAAGACGCCTTCGATCAAAACC GATACTGGAACCCAATTCCTTTCCCGAAATGGCAATTCCACTTGAACACT TCATCCAGCCCGAACGAATATCGAGGAAATCCTGGGAAAGATCCCTTGAT TCCGTCCGGTAAAAGTGGAGTTATTTTCATTGACGATAGTCCGGTTGGAT CTTGTAGCGTGATCAGTATATCAAGTTCCAGTGATGGCGAAAACGATTTG GAACAAAGTGATGTAAAAGACGTTAGTATGCtcgatttgaaaaataatca cTCTTTCACTGCGAACACACCAAGTCCTTTGACGCAAGATTTGGAATCCA AGAAATTTGTACCGTGCGAAGAGGTGCACAATAACGACCCTGCTCATTGC TTTACTTCATCACGCCCGAAACGAAGCCGTATCATTCCGCTTATGCATGA TCCACCGGGTGTTCCGGTCGAACCTAATCATGTTTTCACTGTTCCGGCTC CTTTGCAAAATCTCGGACACCCGCTGCAAGCACTGTTTAAAAACTCCAGC AACGCCCGAATTCCACCACCGGCAGATGTTTATTCAGCAGGGCGAGAACA CCGACATAATAGTCCAACATCAAACGTACCACATACGAATACGGTACATC ACCCTTCTCAAAGGTTCCATCATAACTATTATTCGCAGGGCGCTGCTATC CCACCCCCGCCCAACCGAAGACCTTTTGAGGAGATGCAACaatcgcgatt tttcgaccaaCAACACAATAGCATGAAAAGACATAACAGTTCGTGTTGTT TTAATCCTATGATGACGTCAGAACAAACAAATGGATGTGGGCGTTGTTTT CCAGGTGCCCCTTCTTTCGAGGGCGTTCCACCCCACTTACGCACGGGTAC TGACTATATTCCGTTTTCTGCGCCCCAGCCTCAGGTCGCACTACCGATTG GGCACGCACAACAGGCACCGGCTAGTCACCATAATGTAAGCGCTTCCTCC GCAGCATGTAATGTAACGAATTATTCATCTTTCACTTATTTCAGCAAGTA ATATTTCTTCCTTCACTCGTTTCTTTTCGTTCTGCTCCTTTTACCTGTGG AttaaatcatttcaaaaattttacttaattgATTATATACCTGATTTTac gattttattgtttttataaatatttttatttttttgttaNTGATAGTCCG GTTGGATCTTGTAGCGTGATCAGTATATCAAGTTCAAGTGATGGCGAAAA TGATTTGGAACAAAGTGATGTAAAAGACGTTAGTATGCtcgatttgaaaa ataatcacTCTTTCACTGCGAACACACCAAGTCCTTTGACGCAAGATTTG GAATCCAAGAAATTTGTACCGTGCGAAGAGGTGCACAATAACGACCCTGC TCATTGCTTTACTTCATCACGCCCGAAACGAAGCCGTATCATTCCGCTTA TGCATGATCCACCGGGTGTTCCGGTCGAACCTAATCATGTTTTCACTGTT CCGGCTCCTTTGCAAAATCTCGGACACCCGCTGCAAGCACCGTTTAAAAA CTCCAGCAACGCCCGAATTCCACCACCGGCAGATGTTTATTCAGCAGGGC GAGAACACCGACATAATAGTCCAACATCAAACGTACCACATACGAATACG GTACATCACCCTTCTCAAAGGTTCCATCATAACTATTATTCGCAGGGCGC TGCTATCCCACCCCCGCCCAACCGAAGACCTTTTGAGGAGATGCAACaat cgcgatttttcgaccaaCAACACAATAGCATGAAAAGACATAACAGTTCG TGTTGTTTTAATCCTATGATGACGTCAGAACAAACAAATGGATGTGGGCG TTGTTTTCCAGGTGCCCCTTCTTTCGAGGGCGTTCCACCCCACTTACGCA CGGGTACTGACTATATTCCGTTTTCTGCGCCCCAGCCTCAGGTCGCACTA CCGATTGGGCACGCACAACAGGCACCGGCTAGTCACCATAATGTAAGCGC TTCCTCCGCAGCATGTAATGTAACGAATTATTCATCTTTCACTTATTTCA GCAAGTAATATTTCTTCCTTCACTCGTTTCTTTTCGTTCTGCTCCTTTTA CCTGTGGAttaaatcatttcaaaaattttacttaattgATTATATACCTG ATTTTacgattttattgtttttataaatatttttatttttttgttatgcC CTTCGAAATCAGatcttcaatttcaatttcttatCTATGGGCTGGAAAAC CTAATCActgacaaatcttattttgcttAAAGCTCTTCTTTTCCGCTTCG CACTCCTCTTCATTCTGTTTTCTCCTTATTTATATCCATTTatattttaa gatgaaaacattattttatCAGTTTCATATTTATTTTAAGTAAGTAATGC TTTACTATAAACTTTAAGTATAGCAAGAACTTTTTTTACAAAGGTTCAAT TTTAAAGAGTCAGGTCTGTCAACCATAGCATGAGCTACTTTAGACTGACA TATTATCGACCAACATAAATATTGTGCACTTGAAATACCAACAAAATAAA TGTCTTTTTTGACAGTGGCCTGTTATCGTTTATCACCGCAACCTTTTAAT ACACAAACAAAGCAGAGAGAGGGAGAGGGAGTATTTTAAGATAAGTTTAT TGTGAGAGTGTGTGAGGTATTTAAAGATTTACCATGAAGTATTATTCTGA TAAGTAAGGAGAAAATTGTAAAACCATCCTTTATTATTTTTGTACGGACC AAAAAAATGCCAAAACAAAACCATGATAAACAAAGAAN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006220TCONS_00006220Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006220-proteinTCONS_00006220-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:149269..158606 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.43 3.46 1.25 0.97 63.34 47.16 53.81 57.97 61.59 67.96 95.13 73.23 85.7 87.18 40.02 43.5 58.35 72.77 63.1 63.37 105.45 104.98 48.47 62.48 86.71 90.07 71.15 104.55 42.3 45.47