XLOC_029477 (gene) - C. hemisphaerica

Overview
NameXLOC_029477
Unique NameXLOC_029477
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_106:297010..306599+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029477 ID=XLOC_029477|Name=XLOC_029477|organism=Clytia hemisphaerica|type=gene|length=9590bp|location=Sequence derived from alignment at scaffold_106:297010..306599+ (Clytia hemisphaerica)
CAAAGtctttgacttttttttacgaaaaaatgcttcaaaaattgaaaaag cgaAAAAACAGAACAAAAGACAAACATGAAACATGATATTTGAACACGAC GACAAGAAATTAGTGCTACACAATGTTATCTTGAATAACACTAACTAACC TCTTAGTTTGgttcgaaattttaaacacaccAAAACTGGATAttgatgac gtaatgttttatatacAAGGCACTCAAAATAGTCCAGGCATTTGCCAGTA ACTTTATTGTTTGAATTTAAAACTAGTGAAAAAGACCAGatcttttttgg gtgcttccgtatataACATTCACCCTTGGGACAAAACGTCCGAATAAAGT CCATTTCATTTAAAGTCCATTTAATGATCATTTAACGTCTATGTAGTTAC ATCGCCAGACGAATGTTCAACGACGTTGAACGTTGTGGTTTGTGAGTAAC TGTCACAAAAAGGTTCAGAGGCTCCAACTATTCACTTTAGACAACAcaaa aaaccaaaattaaaagaACTATACACAATGGTCTGTTAAGAACGAACAAG TTACATGATTTTTGCTTGGTCCATATGATAAACATCGCTGCCATCTATGG TTAGCATGGCTTTCTCATTAGGGATTTCTGCAATGTTTTTTTCAGCTTTC TTTTTACCATGTAGACCGATGTATAAATCTTTCAAATACGAATGAATGCC AGGGGTAGCTAGCCAATGATCTATCTCACAAATTGTGATCGAATGAGCTT CATTCTGAGTGCCAGGTGAAGTGTATTGAGGCTGAGGGTGAGCTAGAAGA TCTGCTGAATTCAACAGTCCAGGAATCGCAAATTTATTTCCTTCATCAAT TCGTTTCGCTAATTCTTCCAAATGTTGTttcaaaatgttgatttttttgt aaCTACCAGGTGCTATAAGGTGTTTGATATTCTGTAAGACAACAGATACT CCACTGATCTTGCGGACTGGAGATTCTTCTCCAAGTCTTGAATGTGTACC AAGGAGAAAAGTCTCATAGGAAAATTTCTCCTTCTCTAGCTGATTCATAA CTTTGTATTTAATCAAGAATAGCGAAACCAAGGAGAAAGCATCTGTGTAT TTATGAAGACATAAAAGCgacaaatcttcaaaaatatctTCATCTTTTAA ATTACAGTAAGGGAGGTCCAGGTTCCCCCAATCATAGCGCCCATCAGGAT CACAAACTTTCCACCATTTCAAGAAATCGTAAGCTTCTTGCACTTCACCC AAAACGCATAAAATTCCTGGGATAAGCGAACGTACCCCAAGGTTATCGCC TCGACTCAACCAAACCAAGTCTAACAAATGTTCCACGCAAAGTTCTAAAG ccaattttgaattattttttatccCACACTCGTGCAAACGCATGGATAAA GCATGTCGTGCTCGACAATAGTTTCGTGGCTCGACTAAACTCCAGAAATG ACCGACATCATCTGGAAACAAATCATAAGGTTCGTTTCCAAACCAATCCT CATATCGTCTCAATGGTTCTCTTTCAAGAGCCACTTTCTTTAATAACTTC TTGATCTCATTGCAGTAAGCTTTATGTTTCACCCAATGATCTTTTTGACA TTCTTTGGAGCAATATTTGACGGCCGTACATCTTGAACATCTTTGTTCGG CATCATCTTTCGAACAGTTACTGCATTCAAATGAAGTGCTTCTTGGAGAT ACTGTTGTTTCACTGACGATTCTTGGCTCCATCTTATTATTTTTACTAAC TCTAAAACGAAACAAACACGGTAAATTTGCATAACACTAAACTGTAAAGT CGATTCGttcgatttttttcatttacttcCTCGAATTCGACTTCGGTGTA AATAAAGCAGAAAGATTTcgtttttaaaggaaaatgtaTAAATGAACGAA GTGAATGACATAAAAATACAATATAAAAATAGTAAGAAGATAATGCTAAT CGTAACGAATTAAACCATGTCCACCAAATACATTGTAAAGTCACCGAGAA ATACATCGTCTTTTCGTTTGGCTTGAATAGTAAGCACTCCTCGAGGTTTT AAGGTCAAAAGTTTAAAGTGGCAATATTTTTGGTATCCCGCACTTTATTG GGAGTGGTTCACGTCAAACATATACCCCTCTTAAATTGCCGCTACAAAAG CAATCAAGCGTATTCAGTAATGTTGTGTCTTTGAATGATATGGAAACTAC TTTCAAGCTAGGTGTGCTTTGCCTAGCACTTTGGCAAGTGATACTTTTTC TCTCGGTAGTTCAGCTATGTCGCGTTCAGCTTTCACTTTTCCATGTATTT GAATGTAAAGCTCTTTGGTGAGGATGAAGATATCAGGTACGGGTTCCCAA TGTTTAATATCAAACCAAACAGCACCATAAGCTTGGTCTTGAAGGCTCCC TCCTTCCCCAACATACAGTGGGTTTGGCTGTTCAAGGAGCACTTTATAAT TCAGAAACCCAGGAATGATGTATTTGTTTTTGGAATCGAtaaactttaaa atttgaatCGTTTGATTCCTGATAGTTTCATATTTATCAATTGGAGAGAA ACATTTCTTGATGTTGTGTAAGATGACCGAAACTCCACCGATTTGCTGGA TGGGTGAATCTTCACCAACTCTAGGGTGTGTTCCAAGAAGAAATGACTCA TAGGAAATCTTGTCTTTCTCGATTTTCCTCAACATCTTGTATTTTACCAT ATACATTGAAACCAACCAAGGAACATGTTTTTTACTGAGATTCAATTCCG ACAGATCCTCGAAGATATTctcattttttaatttgtcaccGCTTGGAAGC TCGAATTTAGTGTGGTCATAATAACCATCGTTATGCAACACTTGCCACCA TTTTAAGTAATCATAAGCTTCTTGTGGCTCATCCAGCAAGAACAGCATAC CAGGAATATGTGCCCAACAGCCTGAATGGTCACCTCGGTTAAACATGAGA ATATCTATCAAATGTTCCAAACACAGCTCTAAAGCTAAACGTGAATCATT TTTCTCACCacaaaattgaaagccaatagCTAAATCAAAACGCTCCTTCA GATAAGGTTGCATCTTAGTTATTCTCCATGATTTACCAGTCGNTGTTCCA AACATAGCTCTAAAGCTAAACGTGAATCATTTTTCTCACCacaaaattga aagccaatagCTAAATCAAAACGCTCCTTCAGATAAGGTTGCATCTTAGT TATTCTCCATGATTTACCTCTACCTTCGAGTTTGGCCATCTCTTTCTCTA CTGACACTATTTTCTTTCTGATATGTTTACAAGCGACTTTATGCCAGTCC CAATGAGCTTTTTGACATTCTTTGGAGCAATATCTGACAGCCGTACATCT TGAACATCTATTTTGAGCATCATCTTTTGAACAATTACTGCATTTGAATG TAGTACTTCTTGGTGATACTTTAATTCTTggcttcattttatttttggtc TGGTGAAACAAAAAAAGGACGAAATACAAAGTTTATAAAGCAACTTTGAA CACAATTTTGGCGGAAACTCGAGTCAATACAATCTCTAAAATTTCACGAG AATTTAACTAAATTTTCCCGATAGTGGGAAAAACTGAATTTGGCGGGAAA TTAAACTGACGGACTTTGGTCAAATCCAAAACATTTTCTTCCCGTCAACT accttcccttaaggtattatttGAATGAGTGTTAGATTGGTCTGTCGACT TTTATTCGTTTTTACGCCAGATTTTAATTTCAAGTTTATAAAACAATGTT TTCGTTTTTAAAAGGAAAGTTACAAATGAATATGAATATAgcactaaaaa taaaatatgaaaatagaaaaaaaagtaatTGTAACAGAAGGAATGGATCA TAAAATCCTGTACCTTAAAATCTGAATactaaccccctggaaaaaattAT ATCTAGCTccctggaaaatgaaaatgtcttCATCCCCTCGAAAAACTAAA GGACTTATCGTAGATAAACTTGTCTCGATAATTTAACCCCTCGGAAAAAG ACCAACTTTGACCAATACAAACTCCCTGGGAAAGCGAAAATTCGTCTTGC ATAATACCCTTTGGAAATGCTCGTCCGATCCTTGTATGGATATTATCAAA AGGTCGAAAAATGTTGTTAGATGGCATTGGTTACTAAAGTCAATGAAAGT CATCGGAGAAACACTTTGCTTGAACAGCCTTTGTTGGTGATAAGAAAACC TTTATAAAAATGAGAGCAAACAGTCAAAAAAGACTAGTAGGGCATTGGGA TATGATATCTAGCCGGTGATACACTTTCTTTAGGTAACTCAGTGATATTA TATTCCGCCAACGCCGATCCATGTATTTGAGCGTAAAGCTCTTTAGTGAC AATAAAGATGTTAGGAGTGGCTTTCCAATGTtgagcatcaaaataaacag cGGCATAAGCTTGATCTTGCTGAGTTCCTCGCCCATCATAAAAAGGGTTT GGTTGTCGAAGAAGCGTATCAGAATTCAACAGCCCAGGAATGATGTTTCG ATTCATCATATCAATCAGTTTTAAAATGTCAAGCATTTGATTCCTAACAG TGTCATATTTATCAATAGGAGAGAAACATTTCTTGATGTTGTGTAGGATG ACCGAAACTCCACCGATTTGCTGGATGGGAGAATCTTCACCAACTCTAGG ATGTGTTCCAAGGAGAAATGACTCATAGGAAATCTTGTCTTTCTCGATTT TCTGGAACATCTTGTATTTCACCATATACATTGACACTAGCCATTGAGGA TGCGTTTTTNACATCTTGTATTTCACCATATACATTGAAACTAGCCATTG AGGATGTGTTTTCCCGAGGTGTAATTTCGACATATCCTCGAAGATATCTT CACCCTTCAAGTTACAATAAGGAAGATCAAGATTGTAGTAATCATAACGC TCTTGATGTGAAACTTGCCACCATTTTAAGAAATCGTAAGCTTCTTCAGG CTCATCAAGCATGAACAGCATTGAAGGGATATGGGCACGAACGCCTAAAT AATCACCTCGGTTTAAAAACAAGATATCCAATAAATGTTCCACAGCCAAT TCTAAAGCTAATCGCGAATTGTTTTTCATACCACATACATGAAAAGCTGT TGCTAGTTCAAAACGTTGCTGACAATAGAGCTGGGTCTGTTCTATTCTCA TAAAGTTACCAACCTCCTCTTTGAATAAGTTTTTATTGAAGAAATTTCGT AGCGGCGCTGCCTCCTTTTCTAATAATATCATTTTCTTCTTGATATCCTT GCAAAGTACTTTATGTTTCACCCAATGATCTTTTTGACACTCTTTGGAGC AATATTTGACGGCCGTACATCTTGAACATCTGCTTTGAGCCTCATTTTTT GAACAATTACTGCATTCAAACGAAGTGCTTCTTGGGGAAACCGTCGTTtc gcttatttttcttttttctttgtgcattcttagtttttttcctggaaaga aaaataaaccgtTCTTTGGTTAGGTTAGGAATAAGTATTAGTCAGGAAAT AGTGTATAGTTAGGAATATGGTTGCTTTGAAAAATAACaacttttatcat ttttttccagaaaaaaaaaatttaagatatttcacatgtattgtatttat aaaaatctaaatctaagTTTAAAACGTAAAATTGGAGGAGATTGGAGGTT ATGAAAATTAACAAGGTAAAATGTATGCCAAATTAAATCTTTTTATATTA AGGAAAGAAGACGAGTTTTCACAATGAAGATTTACTTCTAGTCTAAAATT ACCCATAGGGCAACAAACGGTGAACCAGTAAACGGcgagtcgaaaaaaaa aaaaattctgagaaGTATCTTGGAGAAAAATCTTCTTTGTATCATACATA TTTATAGTCCACAAATATTGTAGGTATATATAGACATTAGAAGAAGACCA GACAGTgggtttgaaaaacaaaaatttaatataCCCTTTTGTCAAAAGAG CTTTAAGAATCTTAAGAAGCTttaagacttcgatggccaaaatattaagt taaaaaggttttatttaccaacacttttatcaaaaaattgtggAAATAAG AACGCTCTAAGAATatatttaggcttaaaacttaaaaatgttTAGAATAT CTTGGCTTAAAAGATTTTCGACATAGTGACTGGCAAACATAAAATGGATT GGAGGCACTTGGAGCCTTGAAATCCTTAAAGCACAGAAGTCAGTCATTTA GCCGGGTACTGTAGAAAAATGCTTCAAAATAAAAACTATGTACATTTTAA ACTATATACATCTAAAAATATAAATATATCATATGTAGGTTCTAAAATAA ACTTTTTCTTTTGTATAAAATAAAAATATGAACACAATGCTGATACGGCA AAAAATATCCCAGGTCTAAGTATCTTAATGAAACGCATCCATTTCTGGAA TGATACTGATAAAATTCTGAAAATAATCCTTCGATAATTTGATAACAATT TATTTTGGTTTCAGGAAAAGGGAAGGTGTAAAAGCGATACCCTACTCTAT GGTCCCGAATAGTAGGTGGTTCAAAACAAAAGGGGTTCGAATTTTTTTTC AATTTAACAAGCAGAGGGTCCGAATAAACAGGGGGGGGGAGTTGGTAGAC TGAAAAAAATTCTAATTTTTGCTTTTATCTAATTTTATGAACTTTCAAGC GGTTCCTACTGATAAAATGGAAATCAAACATGGGATAACAAATTCGGACG TTCGAAAATTATTACACTTTAACTGAAAATGAGAAAACTAGAAAATTAAT AAATCAATGAACGGGACGGGGGTCTCTTAAAACGAGAGGGGGTCCCTTAA AACGAGAGGGGGTCCCTTAAAAGAACAGTTGGGTCCTAAAAGGAACGGGT TACGATCTGAAAACCATTGAAAGTTAATAAATGGGGTATGTTTATTCGGG ACCTAAGAGTAGGGGACTTAGGAATCTATAAGACAATTGGAAGTTGAAAC AATGTAGGGCAAAGCCAATAACATAGGTCAGAGGGGCAAGAAAAATGACA AAGAATAGAAACTCATTTAGCCTCGTTAAAGAATCTTCAGAACACAAGAA ATCGATATATAATATGAATCTTAAGAAAGTCGAGTGAACCCTTGCCTTAG AAAATAAGAACCCTGTANATGTACATTTTAAACTATATAcatctaaaaat ataaatatatcaTATGTAGGTtctaaaataaactttttcttttgtataaa ataaaaatatgaacaCAATGCTGATACGGCAAAAAATATCCCAGGTCTAA GTATCTTAATGAAACGCATCCATTTCTGGAATGATACTgataaaattctg aaaataatcCTTCGATAATTTGATAACAATTTATTTTGGTTTCAGGAAAA GGGAAGGTGTAAAAGCGATACCCTACTATATGGTCCCGAATAGTAGGTGG TTCAAAACAAAAGGGgttcgaattttttttcaatttaacaaGCAGAGGGT ccgaataaacaggggggggggagttggtagactgaaaaaaattctaattt ttgcTTTTATCTAATTTTATGAACTTTTAAGCGGTTCCTACTGATAAAAT GGAAATCAAACATGGGATAACAAATTCGGACGTTCGAAAATTATTACACT TTAactgaaaatgagaaaactaGAAAATTAATTAATCAATGAACGGGACG GGGGTCTCTTAAAACGAGAGGGGGTCCCTTAAAAGAACAGTTGGGTCCTA AAAGGAACGGGTTACGATCTGAAAACCATTGAAAGTTAATAAATGGGGTA TGTTTATTCGGGACCTAAGAGTAGGGGACTTAGGAATCTATAAGACAATT GGAAGTTGAAACAATGTAGGGCAAAGCCAATAACATAGGTCAGAGGGGCA AGAAAAATGACAAAGAATAGAAACTCATTTAGCCTCGTTAAAGAATCTTC AGAACACAAGAAATCGATATATAATATGAATCTTAAGAAAGTCGAGTGAA CCCTTGCCTTAGAAAATAAGAACCCTGTAAGAAAACACaagaaaatacaa acaaaacaaaagtaacaaaatgaaaattttaaaacacaaaattCTAAAAC ATTATAAATATCAGCCAATTTGCTTTCAAAGTTAAAAGTTCTCAGTTTTC GTCGTCAagaaacaagttttttttaaatgtttttcttcacTACAGATAAA TTTGAATCCTATACCGAGAGCATAATATATCAATTCTCCATGGCAACAAA GTACAAGGTTACTCTTCATGGTCACCCATATCCTCCTCGTCACTGCTTTC ATCATCAGAGCAACCACACTGGCAACACGCTCATCAAAGGAAGCTCCTTG ATATTCTTCAGGGCTTGTCGCTTACCATGCATACCCATATAAAGtttctt caaaaagtataaaacaTTAGGTGTTGCTTTCCAGTTCAAATGTTCGTAAT CTACAATGTTCCAAGCCTCGTTTTGAGTACCAGCAGCAACATATTGAGGC GTTTGTTGCCCCAGCAGCACGGACGAATTAAGTAAACCAGGAATGATGAA CTTGTTGACTTTATCAATGTGTTTGCCTAAGGCAACCAATTGAATCGCTA AGGTTTGGATCTTCTTGTCCATGCCAGGGGAAATAGCTTCTTTGATGTGC TCAAGAGCCAGCCAAACACCATTCAGCTTCAACACAGGCGAATCTTCACC TAACTTAGGATCAGTGCCCAGAAGAAAAGCATCGTAAGATGCTTTATCTA GTTTCAACTGTCGTATTAGTTTATATTTGATGAGGAATAGGTCAACGTAC CTGTGAACATCGGTGTGGTTGGTCAGTTTAAGCTCAGACAACGATTCGTA CATATCCTCGCCCTTCAGATTGCAATACGGTAGCTTCATGTCATAACAAC ACGAAATGAGATCTCGATCTTGCCACCATTTCAAGAAATCATATGCTTCT TGAACTTCCCCTAAAATACAAAGTGTCGAGGGAATGTGCAAACGAACACC GAGGTTATCTCCACGACACAACCAGATCAAATCCAACATATGTTCGACAG AAAGCTCTAAAGCCAGTTTCGAGTTATTATTCATGCCACATGAACGTAGC TTTAAAGCAAGTCCCAGTCTCTCCTTACAATAGTTTCTTGGTTCAACCAA TCTCCAGAAAATTCCAATAGCAACTTTGAAAAGACTCCCAGGTAGAAGGT CTTCAAGTTCATAAAACTGTCGTAAAGTTTCAGCTTCTTTTGCCACAATC TTGGTACGTCTTTTGATTTCATTGCAATGAGTTTTGTGTTTCACCCAATG ATCTTTTTGACATTCTTTGGAGCAATATTTGACGGCCGTACATCTTGAAC ATCTGTTTTCGGCATCACCTTTTGAACAGTTACTGCATTTNTTTGACGGC CGTACATCTTGAACATCTGTTTTCGGCATCATCTTTTGAACAGTTACTGC ATTTGAATGAAGTGCTTCTTGGAGATACAAAAACGTCactaatttttctt tcattcatttcaagtttttcaagtCAGCTAAAAAATCAAGAACTGGAAAA TTAAAATGCATGAAAAATTATAACACAGAACTTTcattaggctacgtcat atctgcCTTCGCtccgagcgtaaaactcctcctcttcaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046140TCONS_00046140Clytia hemisphaericatranscript
TCONS_00046141TCONS_00046141Clytia hemisphaericatranscript
TCONS_00046142TCONS_00046142Clytia hemisphaericatranscript
TCONS_00046143TCONS_00046143Clytia hemisphaericatranscript
TCONS_00046144TCONS_00046144Clytia hemisphaericatranscript
TCONS_00046145TCONS_00046145Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_106supercontigscaffold_106:297010..306599 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.5 7.92 2.93 2.08 62.78 55.9 18.43 25.08 6.54 6.41 7.05 5.15 4.21 4.69 3.37 3.62 4.54 4.38 0.82 1.17 3.25 3.66 4.18 4.5 12.19 20.05 1.08 0.72 2.71 2.84