XLOC_029478 (gene) - C. hemisphaerica

Overview
NameXLOC_029478
Unique NameXLOC_029478
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_106:342337..347408+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029478 ID=XLOC_029478|Name=XLOC_029478|organism=Clytia hemisphaerica|type=gene|length=5072bp|location=Sequence derived from alignment at scaffold_106:342337..347408+ (Clytia hemisphaerica)
GGTTTTTCTTTATCAGATCTTCCTCGTACTCGACATTGAATTTGACCAAA GAAACATGTACATTCAAAACAGAATGCTAATTCGTACATCGAGACGTATC GCGATTGTCTATGTCTGATGGTATGGTTTTGAAATCTGCAGTCTAAAGAG AGAGAAAAGGTAAGATCTAAGTGAACGTATATAAAGAAATTGGGATAGTT TTGTCTATTTAAGGTACATCATATCCTGTATGAGAAACAATAAGTCTGAA ATACGTAATACGAATCTTTTGAACAGCTATAGACGCacttagcgagttta tgtattggCACTTTTGAGTAAGACGGAGTgactaaaacttgaaaaaaccg CAGTTCTGGCCCACAAAATCGGGGACAGTAAAAGTGCTTGTTTACCGTCG TTCTCAGCTGATCAGGGTCTAtacaaatcagaagctaacaGAAGAATACA CATTCATAAACTCGCTATCGTAGTCCGTTCACCATCTAGAATagaccaca gatctgtaaatcccgaagggctagatttcgtgctttaagcttttcatagc aaaaaaagtaaatattgcaaaaaatattgttgatattgttttcaaaaatc tgcgAGGCTTCTGATTTGTCAAGCACTGAAACTCTAATGTAATTGTCACA TTTCCTACCGAACCACGGCACTCTTTTCATATAAAACTCTGGGAAAGACA AACCTGGATTAGTCATCAAGTTGGTGCAATTCTCCTCAGAACATTGAAAT GAATACATGAATCCATTAATTCTTTCGTCCGTTGAACATATCAGATCACC TTCGTAAGAACACGAACATTTAATATTATCGCTTCCAATTTGAACATTCC ATGAAGtcaaaggaattttcttctGTCCATTTAAAGGGTGGACACAATAA GTACATTGATGTTTAGGGAGTGTCGCTAACAATGTCTCACAATCTTGTGT GTTTCCACATATGGGTTGCCGAATATCCTTATAACGACACGATATGGTTC CTTGTTTGGTGCAATTGCATGAGATACATTCTGTTTCATTACCAAAGTTA ACAGAGTGCATAGACGGAATGATTATTGATCGATTGCCAGGTTTCTCACA GTACGAACAAGGTTCCTTGATAATAATCGcacattttgagcatttttcCG TTGCGATGCCATTTAAGCCTTTTTTATAACAAGTTGAATGCCCATTAGTG TTGTTGCATAGACAGTAAGAACAGTGGGATAACTCATATCTTGTTTGAAA TCTGAAGCCTCTTTTCATGACGCCTCTATTACCCAAGAATTCATATTCCG TTATCTGACATTCTAAAACAGAAGATGAAATCGTGTAGTTATACTGTGAG TTAAATTCAAGCCAAAAACCTGCCGAatactttttagaaaaatttgagGA TTTTCCTCAATcaactagactggagtcgtttataattcgTCTCATACATT GATATCGGTGTTATATAGTACCATATGTTATGGGATTATGAGGTTGGATA AACTACAACTTTCCCCTTTCATTTTGTTTGGCTTATTTTCCACTATGCCT GAAATAGTCGTCTTATTCAAGCTAATACCTCAAAATTAAAAGGAGCTATG GATGCCGTCAACTTCGAAATAAGCAAAATTATTATAAAACACTCACCTTT CGGGCAATTTAGTTCATCTTCTTTATCAGAGCATTCGATAACTCGGTTGC AAAGACTTGACTTCCAAAGCAGCTCTTTCGTTCTGTTACAAACTGTAATG CTTCCGTTGTGTCTTTCCAAAAATGAATCCCTATCTAAGGAACCGATAGA AAGAAACAAGTGTTTGTTACTTAGAacttaattaaaaattttattgtaaC TTTCTTAACCTTAGATTAGACATTGTTTAACGTTGGTTTTCAGTGAAATG AAAACACCAATAAACTGTGCAATCATTGCATCTTGCTTGGCGGTTTCTAT GCTATGGGAATATTTTGTCGTAAAAAGTACACGAACCTGAAATTTAGcac caaaacattcaaaaaatgaaaagaaagtacAAAAATAATCTCAGATCCAA TTAGTGAAAAATATTTGTCGGCAAAATTTAATCGTTggcaaaaattaata accgTCAGTTTTTTTACCGTGACAAATTTTCTATCATTAAACTGCTTATA CCTCCATCACAAGGTGTACAGTAACCATCATTCTGGATAACGTGCTCACA CCATTTCTTCTTTATCTTCATAAATACCGGTTGCCGTCTCTTCGGATCGC ATTTTAAAAGACAATGACTTGAGCGCCATCTAAAGGACATCCCACTAGGA CATAAAGACTTTGATGGTGAATTGCAATCTAAATAGAATTATCAGAATAC AGTTGAccctcgctaattcgaactcgaggGAAATCACGTCTTATTTCTTC TAATAGCATAGAGAAACTCGaataatagaaagtattttaagaaggTTTCT CCTTAGCggggactggaaacaagttcgaattatagaagctCAAATAAGCG CGAGTTTACTGTATTCATTCATCAACTTGCCCATACAAAAGCTAGCCATA ATAAAGAAACATTATTTTGGTGGCCATAAATTAGATTAGATGTTAATCTA TGGATACAACTTGATGGTCAAAAAGAATAGTTGGCTCACGAGTTTACAGA TGTAAAGTTTGGAATTTTGGCTATCGTTTTTTTTCCTATTACACTTTTAT CTATTTTGTAAAGAGTGAACACGATTATTGTTCGTACTACGGCAGGagaa ttttgaaatctttgggTCAAATACAAATCTGATaatcactgggcgaaata agagatttccaatattggaaatatattgaaaatatgatatttccatatac ttttgtaaatatggaaatatgactcttctatatttccaaagttgtggaaa taccatatttcacgatatttccaaatctgaaatatcatattttcgaAATA TTTCCAACTTAATCTATAGTGGAtaactaagggtcggaaaaatccgaaaa tcaaatttcagtcgtcccagtaagggtcggaaaaataggaaaatttcaac tttttaccccctgaaagatcgaaatttggtcaaaattggtcaaattaNca gtaagggtcggaaaaaaaggaaaatttcaactttttaccccctgaaagat cgaaatttggtcaaaattggtcaaattattcccgctaagggtcgtaaaat tcccaaaattttcctttgtattctcctttttagtcccggtaagggttagc aagcacctcactaaaaaccgggatttttcatctcgtttcttagtgagttc cactttgacgattttcgaaaaatagaagcctttcaagtgctttgacgcaa atttgattattttgatactgcaggagcttcgaaagttaaaaatgacgtca aaaaatcgaatgtttagagcccgaaaacctgggctcaaaacattcgaaaa agtcgcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccccccccccccc cggatacaCTCTCGAACAGACTAGGTgaatttttaagtattttagaATTC AATGATAAACATTTACATTTTTGAACTTTAGTTGAATTAGCAAGTTGGTT GCATCTTTCATAACCTTCACATTTAGTATTGTAATCTCTCTTACAGATCA ATTGACGAAAATAACAACTACATTGTAAACAGTAGGGTAATTCGTAAAGA GAAATGAATTGAGATGAACGGTGCTTGATCGTTTGATTCTTGAAAAAACA ATCTAAGAGAAAAAATATATGGTATCGTTTGATCGCATTGATAGCCGCGT AACTAgctgactctcgctaattcgaactcgaagtgggaatcttatttgtt cgaataacagagagattCTAATTATAGAGAATATCTTAAGATGGTTTCTT CCTAATGGGAACTGAGAAAAAGTTGGGATTataaaagattcgaataatag aagttcgaataaacAAGAGTCGACAGTACAAACGAAAAGTTTCTTGTATA ATACAACAATAAGTGGATTGGGCCGAATCACGTCTAACGAACGTCTGTGT ACAAGGACCTCTTCAGAAGagatttaaaaatttgattatttgaattttct tttcgaTTATCCAATAGGAATATTATTCGATATTTTATCCAGCGGGGCGA TGTATGTGATTTATTTTTCCATCAGTGAGGGTTGGGGTCCCAGCTGTTTA GTGATGTGGGGAAAAGATACCATAAAAAGATCATTTGGACAATTTGATAT TCCAAGTTCGAATAACGTAATTCCCTACATTTAAAATTACCTGGACTTTG GAATAATTCTTCAATCATTTTCGTGGTGTAAGTACtgaatctgattggtt caaaaCTTCCAACAGAAGTGTATTTGCGTTTGCTGAAGCATACTAAATAT CCATTTTTAAGACAATTGCATGCGAAATAATCTGGGTTGTACATGAACCA ATGTTCTCCTGGCATTTTCTTCTCTCTTGTGAAAGGTGCAATACAATGGG TGCATTTCTCTTTAGGATACCTCTTTATCTTCCAATAAGGACAATCTTGG TCGCTGCAAATCGGATCTTTAAATCCCGCATATTGACAGATGACTTTCCC TTTCTTTGTACATTGACAAGAGACACATTTCGATTGAGTTGATATATCTA TGGTGTTTCCTAGATCGATTCTGATAGATGTGTTGAATGGGTGTTGGCAA AATGGACAGTCGACGCTGATTGGATCACCTTTTTGTGGACAATTAGAGCA TACCGTATGTCGAGTTTCATTCTCGTCAACTTTGAAGCAAGTAATATTAT TTTGGTCAACGTTGCAATCACAAAATAAACAGCTAGATAACTGGACtgtt ttttgaaagaatttacTGTTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046146TCONS_00046146Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_106supercontigscaffold_106:342337..347408 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0.4 1.96 2.47 3.62 2.4 3.06 3.65 2.31 5.19 0 0 0 0.72 2.69 0 0 0 0 0 1.76 3.1 0 0 0 0