XLOC_029480 (gene) - C. hemisphaerica

Overview
NameXLOC_029480
Unique NameXLOC_029480
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_106:7611..10119-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029480 ID=XLOC_029480|Name=XLOC_029480|organism=Clytia hemisphaerica|type=gene|length=2509bp|location=Sequence derived from alignment at scaffold_106:7611..10119- (Clytia hemisphaerica)
NNAATGCATGTTTAGAATATCTTGCTAAGTATGCCTCAAAGGCAGAAAAA
ATATCAGATGTTGCTCGAGACGCTTTTGTTTCTGTTGTTGAGAATTTAAA
AGGAAATGAACAAATGAGATCTGTTATTCAGAAATTAATGATTAGAGCTG
TCGGGAAAGAGATTTTAGTATACAAGAGGTAATGCACCATATATTATCAT
TAAAACTGGTCAGTTCATCTTTTCAAGTTGTTAATGTTTCAGTTGACGGA
TCTAGAAAGCTTGAAATCAATAATGAGGATGTCCTTACTGAAGCTTCAAC
TGTTGATAATTATGCTAACAGAGCTAACCTTGAAGGATGTGATGCATTCG
TTTTAGATAGCAATTTTATGCAATTTGTTTCGAACTATTCAGTGCAAAAA
GATGTTTTGAAAAAACGTAAGAAGCCAGTTATTGTTAGAGCCTTCCCAAC
ACCATCATTTGATCCAAAAGGACCTAATTTTTATGTATTTTGCAAATACC
AACTGCTGAAATACAAACCATGGAGGACCAGGATTAGTGATGCATGGGAT
GGTTTAAGTGAGAATGATACTGATATGTTTTGCCAAAAATGGAATGAGTT
TTTGCAAACTGATTTAGGTCAAAGTGTTGTCCCTAATTGGAGAAGAGAAT
TTAATAATGCTGAATTATAGTTTGAAAGGTCAGAAACTGATTAGTTTGAA
GAGAATGTTGAAGGGGAACGTGAAGAATGGATGCACTTAGCTGATTTATG
TGCGAATAACAACGAAATTAATCAAGATGAACCATCTCATAACGATTTAG
AATATTGGCAGTCTTGTAGAAATAATTACACTGAAGAGCAGATTGGAAAT
ATGGTTTCTTGGCTTGACAAAAGAAAAGCCGAAATGTCTGAGAACCCAGT
TGAACAAGTGTTTGAACTAAAAGTAGACTCCCTTAATGAGTCTCAAAGAA
AAGCATTTGATATATTATTAGATCATGATATGAATCAGAGTGATCAGCTA
TTCATGATGATTACCGGGTTAGCAGGGAGTGGAAAAAGTTACTTAATTAA
TAACATTAGAGCTTTACTGAAAGAGAAATGTATTGTATCAGCCTACTTTG
GAATAGCTGCATTTAATATTAATGGTAAGACTTTGCATTCTTTATTGAAT
CTTCCAATAAGAGGAAAAAACCGAAACGATTTGAAGGGTCCTGCACTCTT
ACGACTACAAGAAAGACTCAGTGGAATTAGATATATAATTATTGATGAGT
ATTCTGTTGTTGGTCAAAATATGCTAGGATGGATAGATAAACGGTGTAGA
CAAGGAACAGGTGAATCAGGCAAAGCTTTTGGTGGAATATCTATAATCTT
GGTAGGAGACATTGCTCAATTACCCCCTGTTGGAGATGAAGTATTGTATC
ATAAGAAACCTAGAAGTGAAATTGGTACATTGGGTTTTTGCATGTATAGA
AGGTTTACGACTGTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGATTAAGAAACGGTGATTCAACTGAGGAAGANNAGTAAT
GTTGACTAGAAACCTTTGGACAGACCAAGGACTTTGTAATGGGTCAATGG
GAATAGTTAAAGATATTATTTATCAAGAAGGAGATTCTCCTCCAAATCTA
CCTATAGCTGTTATTGTTCAATTTGACTCTTTTTATAAAGGACCAAGTAT
ATGCGAAGACCAGCCTCGCTGTGTTCCGATTATTCCTTTAACAAATTCTT
CAGACCTTCGCGGTACATCGCATGAGCGACAACAGCTACCTTTGAGATTG
TCTTGGGCAATAACTATTCACAAGTCTCAAGGATAAACTTTGAATAAAGC
ATGGATTGATTTAGGAAATACAGAAAGATTTATTGGTTTAGCGTATGTTG
GGATCTCAAGAGTGAGAAAGCTAAAAGATATGATAATCGANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGACATTAGA
GCGATTACAAGATATTAAGAAAAGGAAAAATTTTAAATTTAGAGAATTAG
AAGAACAGAAAATTAACGGTTTGGCACTAGAAACTGAGGCGAGATTGATT
TGATAAGGGTGTACATTGATGAGAACTAAACGTTTTTAATGACTGGGTGG
GTGGTAATACATTTTCAAAATTGTAAATAATGATTTTTTTCTATTTAAAG
CTCGATTTGAAATACATGTCACAAACACAATTCAATGATGCTTCTACATG
ACACTTCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046150TCONS_00046150Clytia hemisphaericatranscript
TCONS_00046149TCONS_00046149Clytia hemisphaericatranscript
TCONS_00046148TCONS_00046148Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046148-proteinTCONS_00046148-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_106supercontigscaffold_106:7611..10119 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.02	2.05	1.38	2.22	2.21	2.84	3.84	2.58	2.81	1.56	0.86	4.79	2.48	2.41	2.22	1.45	1.14	1.63	3.54	3.06	4.21	4.19	1.23	3.17	5.24	2.05	5.37	2.03	3.8	3.7