XLOC_029604 (gene) - C. hemisphaerica

Overview
NameXLOC_029604
Unique NameXLOC_029604
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_109:61055..64373-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029604 ID=XLOC_029604|Name=XLOC_029604|organism=Clytia hemisphaerica|type=gene|length=3319bp|location=Sequence derived from alignment at scaffold_109:61055..64373- (Clytia hemisphaerica)
CCTCACCTTAGAATCTCAATCCAAAATTGTAACGCGGCGACGACAAAACG TAAATTAGTTGTCTATCCTTCGCAACCGCAAACAATAGACAAACGAGTGA CATCATGTAACGATTTCCTGGACATAACGTTCCAAACAATATAAAAACTC TGATTTGTGTGGAGTTGAGCAGAAATCAACAGCACTCAACAGCGGCAATC AGCAGCACACAGCTTCCATAAGATATTTTAGTATTCGGTAGGATCTTTCA TCCTAAGCGATACTAAACTAAATCTTGAAGCTCATCAACAACAGCAATTT ATATCAGCATTTTTTTGATATAACATTTCGTGAAATCAACAATTCAAGAT GGCAAATGGATCTACAATCCTCAAACTATCTCTCTTGTTGGCTATGATAA TGGCGACTCAAGCTTATGTTCGTGTTTGTTATTACACCAATTGGTCACAA TATCGAAACGGCCTTGGTAAATACTCGTTAAGATCACATTACCAGAAAGG CTTGTGTACTCACTTAATGTTCTCCTTTGGAAAGGTCGTCAAATCTGGAA ACGAATACACGATCGACCAATACGAATGGAACGATAAATCAAATCTTTAC AAAGAGGTAAGAGTGATTATTATCGGACACTTAAGTTTAGTCTTCGCCAC GATTTGGTGCGTGCTTGTTTCCCCATTGAAATAATTAAATTAACAAAAAT CTTATTAGCCTCTGTCTCACAGCCCCAGTGGGCAATTCTATTGTACAGAG GATAAAAAATCCATCGGGGATAGTCATGGAGGATAGTGTAACTTTTAAAC ATTGAATTTCAAGTTTTAATGAAATCAAAGTCAATTTCCAAGTGAGGCTG GGGTCACGGCAGTGTCTTATTGATTGAAAAGTATACAGTAAAAAGACTCA TTTCTTCCAGAATCATTCATTTTACTGGAACATGATATTATTCTCTAGGC TATGTCATATCTTCCTTCATTACAAGCGTAAAACTTCTACTCCTATTGAA GCCTAAGCTTTTATTGGGTAGACTTAATCTTTTATTCTGTAAAATCTAAC TCTTCATCTCATTTTTCTTAGATGCAAGACTTGAAAAAAGACGATCCTGG ATTGAAGACTTTGTTGGCTATCGGTGGTTGGACACATGCATCGAAGGGAT TCTCTCCAATGGTGTCATCCAAACAAAACAGAGCTGCATTCATCAAGAAT TCCATGAAATTCATTCAAGACTATGGTATGTGAAAAAATCTAAACAGTTG AAAATAATCGATCGCCTGTAAAGCCAATTTCAGTACAATTCACAAAAGAT AATAATCTCGAGTGCCCCCTTTTTTCAAGAGTTTAAACAATTTACTTCCT TGAGGTATGAAATACTCTTATAACAAAGTTTCCTCAAAAGTCGGAGAAGA GACGTGAAAAAACCAATTATAGTGGCCTTTATTATTTGAACTATTTTGGC TATTATTTGAACTTCATTACTTCGAATTCCTCTGTAATTCAAACACTTTC AGAAAAAGATTTCCCCGTTTGAGTTCGAATTAACAGGAGTCGACTGTAAC ACGTCATAATATGGTCATGTACATAAGTCATATGGTCATGCATATGTATA GAATCAATTTTTTACTTTAGGATTCGATGGTTTGGATTTGGATTGGGAAT TCCCTGGTGAAGGAGGAGACCGTGGTTCATCACCAATCGATCGTCAACGT TTCACTTATCTTTGTCAAGAAATGGCTGCTGTTTACCATGACAACGGTTT ACTAGTTACTGCTGCCGTCAAAGCTGCTGAAAGCTCCGTCAGACATTCAT ATGAAGTTGCCAAGGTCGCCCAAGCTTTAGATTTCATCAACCTAATGACT TATGATTTATACGGCCACTGGTCAAGCACACTTGGTCATCACACCAACAC TGACCGCAATGCTCGTCCACACAATTTACACTTGACCGTTGAAACTTGGC TCAAGAACGGTGCAAATCCTAAAAAGTTGGTTTTAGGTCTTGGTTCATAT GGAAGAGCTTTCTCTTTGAAAAATAAATGCCAATACCATCCAGGACATCC TGGGGGAAAAGCAAGAGCTGGTCGAATGACTGGTGAAGGAGGATTCTTGG CTTACTATGAAATCTGCCAAATGAAATTTGACAATCATGTCTGTACCAAA GACAGCAAAGTGCACGCACCATATGGCAATGCTGGTGATCAATGGGTTGG CTATGATGACCAAGAATCAATCGTCTACAAAATTGAGAATGTAATGAAAA AACACAATCTTCTGGGATACATGTTTTGGGCTTTGGATCTTGATGATTTC ACTGGCAAATTTTGTGGACAAGGAAAATATCCTTTGATGAATGCCGCCAA AGATGCTGCTGAAGGGCGGAGAAAATCTTACTCATGCATGACAAAGGACT CATGCGATGGCGTCCGCCCACCACCACCACCAGAACCGACAATGCCCACC AACCCTCCAGTTGTAGTGACAGGAAAATGCAAAGGAAAAGCTCCATGGGG TGCGCAATATGACGTATGGTGCAATCAAGGTGAAAATTGTCAACTGGCTT GTAATGAAAGAAATGACTGCAAGCAAGGAAGACCATGTTCGGTGAGTTTT CATTCACATTTTTTTGGGACACGCTTCAATACAGTGTGTCCCAAAAAAGG TGGATAAATCTTTATTAAAGTAAAATCATCTTACCTGGGCTTAGAATGAT TGGAATATATAAGATTAAAATTCTATATTCAATTAGATATTCAATTCCCA AGATGATTGAATAGGTTTTTGAGATTGAAATATTAAGTATACAACTCTCA AAATTTCACATGAATTAATGACTAACTTTTTCTTTTCTTTGCAGGTTTGC ATATGCCCCAATGACCCAGAGCCACCAAAAACAACGACCACTACAACGAC AATGAGTACCACCACAACTACTACGACCACCCCCAAAACTATAACGACCA CCCCAAAAACTAAAACAACGACCACCAAGGGGCCCAAAATGAATTGCAAA CCAAAATTGGAGTTGTTCATTAAAATTAAATGGTTTTGTAATGCATATTG CTACAGATGTGACAAAAACATCGGAAGCAGAACAACCAAATTCTTCAATA GTTATTGCACATGTGAGTGAAGATGAATGAGGAAAAAAAGAAAAACTTCG AAAGCATTTTAAGATTATTTATTGTGCTATTTATTTGCTAATTTATTAAT TTATTTTTATGAAAAACTTTCTTAATCGAAGTAACGAAAGTGCCAAATGA TTTTCAAATTTTGAAATTTAAAATGAAGTAAAAATTTTCAAATTTCAAAA TTTGAAAAATGAAAAATGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046389TCONS_00046389Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046389-proteinTCONS_00046389-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_109supercontigscaffold_109:61055..64373 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CHI3L1PREDICTED: chitinase-3-like protein 1 isoform X1 Homo Sapiens
CHI3L2chitinase-3-like protein 2 isoform a precursor Homo Sapiens
CHIAacidic mammalian chitinase isoform c precursor Homo Sapiens
CHIT1PREDICTED: chitotriosidase-1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.75 0.78 0.8 1.02 2.16 1.4 0.78 2.33 1.44 12.79 2.03 0.38 108.48 16.79 321.84 453.29 8.54 9.58 0.31 0.44 0.4 0.35 1.86 1.93 3.95 2.25 0.12 0.26 0.3 0.32