XLOC_029784 (gene) - C. hemisphaerica

Overview
NameXLOC_029784
Unique NameXLOC_029784
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_116:696029..700479+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029784 ID=XLOC_029784|Name=XLOC_029784|organism=Clytia hemisphaerica|type=gene|length=4451bp|location=Sequence derived from alignment at scaffold_116:696029..700479+ (Clytia hemisphaerica)
GGGAAGAATTTGAAGacttttgtgtaaaaaatctcATTTCTTGAAGAAAG
TGGATCATCTAAAACCCCTAACAGAAATATTGGACCATGGAGGATTTGGT
AGATTGTCTTCAATTGAATTGCAACCCAAAGGAAATGCCGTTGATGAAAC
AACACCGACACACCACCAATCATCATGACATGGTATGTTTTCATTCGTAT
TTTTTCATtgtcatttcattttcattcccTTTTGCACTTTTAAGTCAGGT
TGCATTTTGTAGGcataaatttcaattcaaattctaaaaagaaaaatctg
aTTAACCtgatttttaaccttttttagcCTAACTTTCCAAGCCGATTCCT
TTTCGAATTGCTAAGTAAAAAGATTTGTGtcaagttttttgcttaaatca
tTGGACATACAATGTTAGATCCCTTCTAATGCTCAAGAGTATGATCGATT
ATAGCAGTGTTAAAATGACTATTAGAATCTGTAGCATCTTTCGTGGGTCT
CAACTACATGgtgattggttcgaaagtagataggatttttgaaaaatgaa
aagttgtCAATTTTTCACTCATGTTCAGTCATGTTTTGGGGTTAAGAGTT
TTGCCTACGACGTCggttttttggccaaaaaaactTTTGCCATGCCTAAT
CCGCGAGCCCTCtctcaaaaaagtcttaaaattctATCTACTTTTGAACC
AAGAACCAATCACATGTGGTTGAGTCCCACAAAAGCTACGGATCCTATAA
GGGATGTCCTTCTACTATATAGAAGATTTAGAACTTCAAACAACGATCGA
ACCGATAATCTGATCTTCATATGATTTAACTATAAAAATACGATATAATT
TTCCATCACTGATCACTTATCATCCTGTATCATCTCTATTTTAAAACAGC
CTCCTTTTAAAGcgacacgttttttataagaacatccaaaattcattcat
tcctaaaaatgttcttaacatgttcttattttgactattttgtgagtatt
tttgaccattttcccaagaaatagggtgtttctgagtccacaaagccaag
atgttcttaacttgttcttaaattttcgacCAACCAAGCCttacatgttc
ttataaagtttgttctcaTATAAAAAAACTGTATTTCTATCTTTAAAACA
ACTTCCTTTTGAGCTATTAGCATTTCCATTATAAAATGGAACATAGCGAG
ATATTGATCTATTAcagtattataaaaaaatgctttttaatttttttacc
actATTCTGGTGAGATATGATTTATGTATGGTACTTTATAAGAAAGATTG
GAAAGGTTTTATGAGTGATGTTGATAAGGTTAAGGAAAGAAAATGTCTat
gtttatattttattatcatttGGTACTTAAAAGTAACgttaattttcttt
ataagaatgttctaACCATTTCTGAGATTTGTACTTGTTATGATATTTAT
CACTAAATAGAAGGATTCTTATTCTAGTGTAAAAATTAAACCTTTCTCAC
TGTTATTATGCATATAACTCAGTCTTTATCACATTTTCCACTTATTTCAT
TTGAGAGTAGTTTGCAGACGTTTTTTTTCTGATACTGATgggtttttttt
gcttgaaagtttgaagggctacatacactacacaatatattgccaggcaa
tatattggcaatttgttgatgatatattgctgagtgcAGATAATATATTG
ctaaggtgtccgcaatatattgtcagctcgatttgcaatattcagACAAT
ATTAAGggatttttaaagaaagaaaattcctttttataatagagtacctg
ATGTTTACTTCGTACGTTACGGTCCGAAAACTATATTGTTGAATATTGTT
CGttaatatattgtgtagtctcaGTAGCCcttaaaggtttcatttttaca
tcagtgtcttgctattgttatattatgatGATATaaccaaaaatttgttt
ttcttttcctctttctgaccaatcttgctccgcatccgtgtcaatccaat
gttaaaaagcttgtgaattaaaaatgatgagtaagcaaacgatatcactc
ttatttaaaaacaaaacctttaaactttAGAGATGGAAGGTATTCTTGAT
AACATCGTTTTGCTTATGGTTTCCTCTGTTCGTCTGCATTGTAGATATCA
AATTATTCACTGTCACATAATTGTTCAGTTATTTAAATGATTTATCAATT
AAATAAAGTACTTTTCTAACTTGTCAACTTTATTGATTGATTACTTACTC
TGCTTTTAAAATTGATACTGATGTGGAGCAAGACAAATGAAAgtgttttt
gtttattcagcaaaAATAATAATGTTGTGTTATCTGTTATGAAAAGATGC
ATATTTGATAGTTTCCTCATGGATACCTATTTTGAAATACAGTAGTCAGT
GAAATTACTAAATGTCAAATTTGAATGATTAGGCAAAAAAATCGAACTAT
TTTAAACACGAGAGTGTCGCGTTTTCATATCCGAACTTAAATGAAAAGGG
GTTTTTGAATCGTATAAGGTTGGCTAATAGATACTAAATAAGAATTGAAA
TACAAAGAATTacctttttaaaacttttaagatCTTCACTGGCAACAATG
GCAACAATGAGTACATTGTTTTACCTCAGTTACGGTAACACAGCAAAATT
TAATAAGATATTTGACTCTAGACCAAAGATTGATGAATaatattttatca
tttattACATAATGTCTATCCCTCTGTTTAAAATATTCCTTTCTCAAATA
TTAGTTCAAGAGATTTAAAATGTACTGTGGTTAGAGATTTTCACTGTTTA
ATAAATTGCATTTGAATTCGTTTTATGTTGGTATGTGGTATTggttttag
aatatttttgacATGAATTTTTTGCTCTCGCAGTTCATTGTATTGCATGT
AGAACTGAGCGAGAAAACATATAAAATgcagggccggcgaatcaattttg
aaagtggaggggccaaatagtaagtgtctaaggaggcgccaccatggttg
gttgattttttttttcttagcaaaaaagtgggggggccaaatagtaagtg
gctaaggaggcgccaccagggttggttgattttttttttcttagcaaaaa
agtgggggggccaaatagtaagtggctaaggaggcgccaccagggttggt
tgattttttttttcttagcaaaaaagtgggggggccaaatagtaagtggc
taaggaggcgccaccatggttggttttttttttttttaacgaaaaaaggg
ggggggcccccccccccccccttgccccccccccagtttCGCCGGCCCTG
AAATGTTGTATGTCATGTCATCCTGCTCTATAATATATTTGCACCGTAAT
TTCTCATGAGTATTCTTTATATTAGACCGTCTAATTAGCTGTCTTTCCAT
TGATTTATGTATGATGGTtgtctcttttctttttcttaaaattgtaCAAT
TTTATTCTAGTTTTTGATtgctttctttcaaaatatttctccgTTAAGCG
AATTCGTTTTGTAATAACCAAAGGCTTGTTGTATTTCTAACCTCGAGAAA
GTTGGACCTCCTACAATCTGTGACTAAATATTGTGGCAAGAATTCTCTTC
CCCCTTAGTATCAATGTTGATGGGTAGAGTGGCTGCCACCATGCTCAGAA
AAAGCTCACATCAACACTGATATTAGGGAGAAGCAATTTTTCCAGAAATT
TCCACATATTTTTTCGCTGATTGTAGAAGTCGTTCATCGTCAAGCTTGGG
GAGATGTGGgtgtttcacattttgttttTCATACACCCTAATTTTAAAAG
AGAAATAGAGATTGTAGTTCAAAGTTCAGCAATCGTGAAAAGTATtgtgt
tatttttgtatttgcTTTTTCTGGATATTGGTATCTTACCGTTGAGATAG
GGACTTTTTTGTAACGTGATTACATGGTTTGGAAGTTTTTGCGTGATTGC
ATGATGAGATGTCAAAACGTGattgtgatttgaaaaattttttagcCGTG
ATACGTGAgctggactttttcaaagggatgcgtgattgtccatttttttg
cagatttgcgtgatcgtgattgaagacaaagaATTACgcgatatcgtgat
cagagttaccgctggtGGGAGGGCTCGTTGAGAGTGGCGTTGGTATGAAA
GATTCCAGTTACAATACAACTGTACATTTTTTACGTATGATTGTAGTTTT
TTATATGTTGAAGATATTTGTTAGGACTTTTTCTCTGATGAGTCATAATC
ATTATTACATGATGTAAATCTATTTTGCAATGTGAAAACATTTACTTAAC
CTGactctcaaaataatttgattataaacaaaatttaatgtcaATGAAAA
CTTTATAATTCTTCTACTACCATTCTTGTTTTGTACAAGATACTCTTAGG
GTGCATTTATAGCGAGTCTTTCGTTAGCCAGACTGTTACAAGTAAGTCTT
G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046670TCONS_00046670Clytia hemisphaericatranscript
TCONS_00046671TCONS_00046671Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:696029..700479 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.45	0.77	0.46	0.6	0.54	0.57	1.16	1.35	4.22	3.5	2.43	3.24	0.98	1.78	0.53	0.42	0.75	0.84	1.1	2.01	1.28	1.71	1.39	1.15	0.92	2.08	1.6	1.56	0.94	0.98