XLOC_029801 (gene) - C. hemisphaerica

Overview
NameXLOC_029801
Unique NameXLOC_029801
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_116:490715..495380-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029801 ID=XLOC_029801|Name=XLOC_029801|organism=Clytia hemisphaerica|type=gene|length=4666bp|location=Sequence derived from alignment at scaffold_116:490715..495380- (Clytia hemisphaerica)
TACAGACCTGTTTTTTTTTTAATAATGATAACGTGATCAATTCTTTTACT CCTTTTAAACCTCTTTAAAGTAAATATTATTGAAATCTTGATAATTTTAA TTTGAAATAATAGCTACTTTAGGGCTAATATATTTCTTCAAATGAAAACT GCTCTTTTATTTCGTGGTAAGTTAATTACTACACTACACTTTGTTTACAT CGAATAAATCAAAATGGTATCTTAAAAGTGGGGTGTGTTTATTTTGATTT CTTTCACTTTCTTTTTCCAGTGCTTTGTGTTGTTGTCAGGATTTTTCTTT TCCAGCTTTGGAGATTTGAAACATGTCAATAACTATCAAAGGAAAGATTA GATTCGCTTCCCCTCCTTTAACCATCCCAGATGGATCTTTGCTAAAAGTT AAGTTTCAAGATACAGGTCGCATGGATGCTCCATCAATCGATTTGGGAGT TTATGAGAAAGTCATTGAGAGTTATAAAACTGGGGATGAAATCACTTATG AAATCAAATGTAATCGACCAAACTGCTTCGGTACTTCAGTAAGTCCGCCA CTTTTACTTTCTTTATGTCATATTTTCATAAAACTAATATAATACTAAAA GTAAAAAAAAAAAAATTTAAAACAACCCGAAACACAGTTAGGAACATTTG GCAAGTTCCTGTACGCGGTNCCAGATTTATTCAGATAAAGCTATAAGAGG TTCATTACTTGTGGGTTTTAAAACCTACATGAGCAAAAACGAAAGTTGTT GGGAAGGAAAGAGTAAACGCAATACAGAAGGTTTGGTTGTGTTGATCAGG TATGTTTTTATTCTATCCGAACTAATGTTAAAAAAGACCAAAGAGGTCCT GACTGACGGTGGAGTGCATGACGTAACTCGCGCGGCAACAAACTCGCCTT CTGTTGGCTGGTCATATTGGGCGTTTTGGCGTTACCACCCTCGAAGCAGT GGGCGCATTCGTCATTCCGCAACTCTGTCCACCATTTTAAATGAGTTAAC AATAGATCCAAAAGGGCGCCCTCATCAAGAAAGATTATTTGCTATGGTCT CCGGCTTTGGAAAGCAGTAATGTTTTCGATTGTTTTCGATGGAAAATGGT AAGAAACTTAAGTTTACAAGTGTCATTCAGNNNACCAAAAACATTGCTAC TTCCCAAAGCCGGAGACCAAAACAAATTATCTTCCAAGATTATGGCGCCC TTTTGGATCTATTGTTAAGGCCATATAAAATGGTGGAAAGAGTTGCGGAA AGACAAAGGCGCTCGCTGCGTCGAGGGTGGTAACGCCAAAACGCCCAATA TGATCTACCAACAGAAGGCGAGGTAGTTGCCGCGCGAGTTACGTCACGCA CTCCACCGCAGCGCATAACGAAGTGTGTATAAATGAATATCATTAATTAT AAGAATATCTCATGTGCTTACTTTCAGTAAACTTCGAGTGCTTCATTAAA GATGAAGAAAGTAAGAAGATAAAAAATGCGCTGGATAATTTTCATTGTAA CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NTGAAAGTTTGAAAAAGTTTTTCCGACGCAAAAGAAATTGTCAGCCAATT AAAAGCACAGTGTGCTTATACTTACTATGTTTGCTACATTGTCTAGGCTA AAAACAGTGCGAAAAGACACGAACGCCATTTTTTATTGAGTGACGTTATG ATTTTTTTGATTGCGGCCGCGTACAGGAACTCGCCAAATGTTCCTAACTG AGTTTTTGCTGGCTGATAGAATGGCAGGATCCTGGATGGTTTCCCTAACT GAAACAACTCAACACTTGTTTTGATCTAGTAATATTGGTTTAATGTTGAC ATCTCTCATCTTATTCCGACACCATTCTTTAAACTTTGGAATAAAAGCAC ACCACTATGCAAACGTCATAATTATTACTTTTAACATTTGACCAAAATTC AATCCCACAACTCCTCATCTTGATTTGCATCGTAAGTTGGTCTAATGACT AATGTCGACATCCCTTTTCTAATTTCAACACCCTTCTTTAGAGATGTATA AGAATAATACGAAGGTCGGAATCACTGATTGAAACTAATCTTTGTTGCTT AGCGATCAGAGTGGAGTAAATCCTTTGTCTATCAGTGATTTTGACCTACC TATTATCCACATTTCTCTAGACAGCTCAAGACAGTCTTAACTCACCACGG AAAAAAATGTTGTACATTATATGTAGGTTTTTAATCGGCGCGCATTATAA TGTAGTACATTAAAAATTGTTCAAAGACCTTTCTACACTCAAATAAATAA AAGAAAGACTCTTCTACACTTTACAGATTTAACCATTTCCCTTTTAAGTT GGTGCTCATCCATTCCAGATCATCTAAATAATGACGCAATGTTTCGAGCT CCACCCCTGACCCTAACTAATAATATTGAAATAATCAAAAATCGAAGATA TCGAAAAGGTCAAAAAGGAAGAATAAAAAAAGTCTACTTTTGGCCGTCCA CAACCCCGACCTAAAAGTGACTGAACTACCCCCATAGAAAAACAATGATA AAACCATGCATAATTATTACAATATGCATGATACAGTATGCATGATATGC AAGTTTTATTATTTTTGTATTGTCAACAAAGTGTAATTGACTTGCAAAAG CAATTAATGCAAAGGATGAGATGATGGGATTGAAACTCAGACAAACAGTA ATTTTGATGTCTATTTTTAGAATCACTGCGATACCGTGAGATCGGGTAAC TTGCATCAGTGGAGGCTAATATGCATAGCCCTCAAATGAATGACCTGTCT GGTCATTAAAATACAACTACACAGCTCCGCTCACAGCTCTAATCTACCAT TTTTGTTTTGATTTAACTTTGTATTTTAATGACCAGCAACGTCTTTCATT TGAGGGCTATGCATGTTAGCCTCCACCGATGCAAGTTACCCGATCTCACG GTATGCTATTGAAAGGTCAGAATCCCTGTGCCTGTCCGCTAATAAACGAA CAGAGAGGTCTTTTTTTCAATCAGTGATTCTGACCTTCCTTTAATTTCTA TAAGCTAAGGCAGGGTTCACTCACATATCAATGTTTCCCATGACTAACGT CAAATTGACGTGGGAGGGCGGAGGGGTCTGACGTTAGTTGAGGAATGTTG ACATCAACTTACTGTAATTTCCATCCAGACTTTTTCAATCAATAAAACTG TCTGGTGTTTTTGTGTAGTGCCAAAAAGTGTAGTCCTTTAGGAGAATGCA ACAGTCTATTGAATAACAAATTACACCAGTATACATTATTTTCCCTAAGC CAATATAAACGGGTGATAGATTATCTTATTGTCCCTGTAGATAACAGCTG TCAGGCTGTGTTGTAATAGACAAATCAATTATATAATCTTATCATTAAAA CAAAATAAATTTTGGAGTAATCACAAATTAGTTATTCAAAAGATTGCATT CTCTCAAACGACTATTATTTGATTATATGATTCTGGATACTGGACTAGAC ACTTTTCCGGTGGGAAAAAGTTTTAACATCAGACATACCTACGTACTATT GCATACTAATTATGTATGGTGTTTGGATTGTCAAGTGACAAAATGTTTTC TCATTTAACACTAAGCAGTGTCAGCAGGGTTGTAACTCAATCTTTAACCA TTATTACAATTATTAGTAATTTTTACTTAAAATCTTTTAAAATCTTTTTC TATTTTAGATGAGTGCTGTTTTAAACATTGGCTGGAAGGCTTCTGGTAGT GAATGGATAAGAAAAGGGGATCACTTGAATGACACGCACCATGACATCGA TGTTGGAAATGCTAGTCAGGTTGTTTTTGAGAAAGATATTGAAATCATCC ATTACAAATGAATGTGCTCATAAATAAATTCAGATTGTCAATTAAGGCAA TAGCACGCAATATACTTTCAATGGGGGATACAGAAATTCAAAACTAGGAA CTGTATTTTGTTTGCTAGTAAACTGGAAAAAATTATGAAGAATTAGAGAC ATTTTTTTGTTATTTAAGTAAGAGAAATAATATTCACAATTACAGCATTT TCAAAGTGCTCTGGGGTTGCATACAGTACGTCATAATTGTTTTAGCTTAA GCTTTATGACTTTAAATCATACAGTTTATTTTGAAATGATTTGAAAGCAG TATAATTATTACTTTTTATTATATACAGTATATCTAAAACGTGCTATATC AATTAACACAAAGGCGGATGAGATTGAAAGTGGTACAAACTTACAGATTT ATGCTTTTTTTTAGATTCGATATTTTTTTCACTGTCATGTGTTATTGGAA ACCCATGCTTACTAAATCTAAATGGAATAAGATTGATAAAAAAGTCCAAA TGAATTGGACTAAAATAGTTTCTTCTACAGAGATTTTTTAAAGTGTTTTC AAGATTCAGTTTATTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046710TCONS_00046710Clytia hemisphaericatranscript
TCONS_00046709TCONS_00046709Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046709-proteinTCONS_00046709-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:490715..495380 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
69.78 73.35 31.69 31.48 60.25 44.92 61.44 66.1 53.81 56.4 47.68 42.81 44.76 37.18 31.95 32.27 64.07 76.11 52.25 64.37 81.92 83.83 60.42 61.93 29.06 32.72 88.21 67.62 61.41 62.45