XLOC_029854 (gene) - C. hemisphaerica

Overview
NameXLOC_029854
Unique NameXLOC_029854
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_117:492209..499779+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029854 ID=XLOC_029854|Name=XLOC_029854|organism=Clytia hemisphaerica|type=gene|length=7571bp|location=Sequence derived from alignment at scaffold_117:492209..499779+ (Clytia hemisphaerica)
GAACAAGAAGTGAAGGCCAAAGAAAAGTGAAAGCAATGTtaattgaattt ctttattttattgattATGCTGGAAGGACATTCTTTATGCTTGATAGACA AAAAGTTGATTGACCAAAGCAAACAGCACCAAGAGTAAGTTTACAGTATA GTCATACTATGCCATAGTCAGATAGATTGAAACCCCTAAAAACTCTCACT TTCCCACGACGGTCACGGTGGTGATGACTTCTTCTTCTTTCGTATAATAA GTTTAAGTGAATAACACAAACAGCTCTATTTTTGGGATCTGGCCTGGCGG AATAGTGTACCGTAggacggggtgaatcggataccCGGGGTGAATTGGAT ACCCGGGGTGAATTGGATACCCGAGGGTGAATCGGATAATTTGTTTATAA TCCCCGGGGATGTCTTTTTCCATTCTGTTTTCAGATCCCGTTCACTGATC GATCAAGCTATTTCTATTTAATCAGGCGACCTAGTAGGGTTTGGTATGGA TGTGGTTATGTATCAGGTTGTCTAGGAATAGGGTTAAATTTACAATTGCA AAAACGGTGCAAAACTTCATGATTTCCGATACTGTAGCtatattcaagat tttttaaggcaaaatcTTGGATTTCCCAATAAATAGCAATGAAATAGAGC ATAGAATagaaattttatggattttctgaTACTGATGACCAAATAATTAG GAAAATCCTGCATTTTCCGGgaccttttttaaaaatctttcaggATTTCC AAGTGATAAATAATTCCAAAAAACCCTGTCATCCACCGGCAAATAATGTG TGTTTCCATTTCAAGAAATGACGTGCAAGTCATCGATGACCATCTGGAAA TAAGGCTGCAAtaacaaataacttgtgttcatgtcagaaagtttcaaaat acTGTACCTTTCccataattcaaatttctcagaaatgacaagaaaatgtt tcatttcCCTTCGTACCTCCAAAAATAGGgcaaaatcagaatcccccctt tataaaggggggggggcactatgGCCTGCAAGGGGTTAGGGCAAGTATCT ATCTCTCAATATCTTTTTGggaattttcagggtggtatgaTGAAAAAAAC ATATCATAATTTGAaagggaaaagaaaagaaaagctaaaaaaaccccaac aattaaattatttttgaaaaaaattgtcttgCAAAATCGTCTGCTTGCGA AAATTAAGGTTGAaacaatttttctttgctttttggtCTATCTGTCTCTT TCataatcaggtaggtccaatcagcATCCAGCTTGTTGTCCCTAAAACAT TGAACATTGGTCGAATtgaattagtcccaataagggttgtaaaattcaca aaatttttcagTTGTTCCTCTTTTTTAAGTCCTGCTAAGTGTGCGACGGT CAAAAGAAGTCAGGTGGCATACCCCGTCAgcttccaaccccccccccccN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNccccccccccccggttgaAAACGAAATA TGATATTAAGAAAGTTCAAATTGTAGGAAAAAGTAggaattgatttttga tttatttaatgGCATAATGATCATTTTTCTATGAATCATGGATCACATGA TTTGCTGCAATCCTTGTTGGGCTTAGTCAATAACTTTCCACACGAAAATT TCTCTGAGACCAGACAATGTTTTGACTTCTCATTACTCAAAACAGCACAG GAAGTACAGGTACTACATAAATTGACTGTCATAGCCTCCTTGGGacgaaa acttttttaaattctatCTAGCAGaaacaataaagaaaaatggCTGAAGA AATTGAGGCACAAACTTTCCCAAATATAGAAGATAATGATTCAAGCTCAC AGCTAGGTTCAAATGCTTCCAATgaagttttaaaagaacaagACGCAGAT GTTATTGACGAAACAGCAAGTATGATAAATGTTGAAGAATACAAACACGA ATCTATTGTTAAGGATATCCCAAAGACTGAATTAGAGAAAATGACACCAA GTTGGAAGACAAAGATCATTGAGAAAATACCAGCAGAGGAATTAGATGGT CTatctaaaaatcagaaaaaaaagttgtttaagAAGAAGATCTTTGAAGA AACACGACATGAGAGACGACAAGAAGAACGCTCACGTCGTAAAGAGAAAC GCAAAAAGGAAAAGGAGTTAGGACTGGAGGTTCCGCGGAAATTACGTGct aaacatttcaaaaatattgaataccGTGACCCCAATATTGTCATTGATTT AGATTTCTATGAGTTGATGAATGAAACTGATGTTAGGATGGTTGTGAAGC AGGTTAATTCTTGTTATTCCATCAACCGAAAAGCAAAACATCCTGTTCAT TTACATGCAACTAGCTTTCATGGACCTTTGAAAGACTTATTTGTAAAGCT ACAACCAGGTAGTCCACATTGGGACTTTCATTTCCAAGAGAAAGACTACA TTGATTTGTTTCAGAAAGAGAAGATAGTCTACTTATCGTCAGATTCGGAT AATGTTCTAGAGAAAATGGATGAAAATAAAGTCTATGTGATTGGAGGCTT AGTAGATCATAATCAACATAAAGGACTTTGTTTAAAGCGAGCCCAAGAGA AGGGATTAGCTCATGCTAAACTACCTATTAACAAATTCATCTCATTATCA ACAAGAAAAGTATTGACTATCAATCACGTCTTTGAGATTTTATCCAAGAA CCTTGAAACTAGAGATTGGAAAGAATCCTTTTTCTCAGTGCTGCCAAAAA GGAAAGGGATCGAAGACAAGAAAGAAGAAGTTGTTGTGGCAACctaaatg attttgttttaatGTTGGGTTTTTGTTTGGGTTGGAACAAAATTTTTCTA CATAATCTTTAGGTTAATTATATTATCAAACTATCTATTTAGTttctttt tgtatcttttttaaaagaaaaaagagctcACAATTTAACATTATTTCAAG GTAAAATTATTACtttcttttgtaatatttttggtgttgaagagtcaaaa aggttaaaaaaggtcACAGTTATTTCATTTCTGGAGTCTTCAAAATCTCT ATGATAGGACAAAATTTGCTgctgctacacgttttttttNATGGTAAAAG GGCCAATCTGAAAAATATTGGCTGGGAAAACTAAGAATTTTTCATTGTAA CTGaccttaaattttgagattgacctTTTTTTGTAGCTTGGAGGGTNAAA TCTCTATGATAGGACAAAATTTgctgctacacgtttttttttttattaga acaccttaaatttggctgagcctggatgtgcttattcttttagcaatttt cagcctgaaatgttcttagatgcgttcttaaattttcagaNTGGCTCCAA GTTGAAGGTCAGCTAAATAGAAAGATTTATAGTTTTCTGGGGAAATATAT TTAATGTATTCTTGTTATTTAACCAAGAAACTTGTTTTATTAAAGTTTCC TTGGTATAACAAGAACTTAGTTAACTTCCTGTTATCATActcaaatgtca aaaatgaaaGTATCAGATTACCACTTGCTTGTTTCTTTAATGTCATGTTG TTgttaaaatgttattaaaaagGAATGTTTAAGCTTGGTCACGAGTTTTG TAAAAGAGATTCATGTTGTGCTTTATTTCATTCTGGTTAGTAAAAGATTT GCATTTTGGACTTATTTGATCGCCAGCAATCATTTTGGTCACAAACAATG GATtctttagaatttaaaaaatttatcgTTAGAAAAAGGGATTTATTGCT TAGATTTTATGGGAATCACTGTTGCTTTTTGGCTTAAgtttaaatgactt tttttcaatgaatttttGTCCGAGGGGACagtacagtgtgtcccaaaaaa agagaacaaatttttataaaaagtaaaattctcaaaaagttTTCATCTTA ACTGGGCTCTATGATTGAAATAAGAGTAAaattctctgttcaatcaatag aGATTCAATTCCCAAGATAATCGAACAGGTTTTGGAGATTAAAATACCTT aattggataaattttagcggggattaaatttggcgaatttggcgaatttt gccaaaattcgccaaattaaatcctcgcctaAATTTACAAATTCGGcaaa tcgccaaattaaatccccgccaaacttaacaaaaagagaattatgtgaaa aattacAACTTATTAGTATATtgttgagtaattttcacccatttcagtgt gacaaagtttccaattcgccaaattaaatccccgccaaattttgcgaaat tgatctatcgctaaattaaatcccctccaaaaatcgtattttggccaatc tccaaattaaatccacgccaaaatttatccactaaGGTATTATTCATAAA GTCATAAATTTCGCATGAATATAAATTTCGCATGAATATAAATTTCGCAT GAATATAAATTTCGCATGAATATAAATTTCGCATGAATataaattatgag gattttactttatataaatattttgttcgttttttttgggacacactgta atGAATACTTACAATGTTAAATTTCATTTGGAAAATCTTTATATTTAGCA TTAgactttctttttctattttagtgaataaagaaaacaacgaaaattaa aaaaagtaaagcACCCTAACATGTCAAAGGTGATTGATAAAATCGTCAAA GAGTTTAAATCATGGACTTGGCATCACTTGTTTGTCTTCGTGTTAACTTT CATGGCATATGCGGCTTTCCACGGCTGCCGAAAGTCGTTTAGTAACATCA AGGATGAGTTAGCAGAAAACTTTACTCCCAATACTACTTATTTCCCATAT GATACTTGGCAGAAAGAAACTACCTTCGCGAACAAGGATGACGCTGATGT TTTCTTAGGTAAGGTGCCTTTTATTTTGACTGTTGAGCTTTATGTAAATC CTGGAGGCACTTCCTTGGTCCCGGCTAACTGGGATTTTTCTTCGGAGTTT TTATGAAAGTGGTAACCTAATGAGGGCAAAGGTGTAAATGCGTTTTTGCT TTCATCGAATACCTGATATGATGTTGTGTCACAAATATTTAAATGAAGGT TCGATCGTGTTTACTGTATAATAATTATTTTGACTAAAATATGATCGCGG TTataaaatctcattttctttatttatagGTGAATTagattctttgtttt tgttcgCCTACGCTTTTGGTTTATTCGTCAATGGTGCGTTAGGCGACCGC CTGAATCTACGATATTTCCTCGCCTTCGGCATGTGTGGTTCAGCTAtcgt cactttcattttcggtTATCTTGGAGCAGCTTACCACGTCCGAAAANNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTA ACATGTCAAAGGTGATTGATAAAATCGTCAAAGAGTTTAAATCATGGACT TGGCATCACTTGTTTGTCTTCGTGTTAACTTTCATGGCATATGCGGCTTT CCACGGCTGCCGAAAGTCGTTTAGTAACATCAAGGATGAGTTAGCAGAAA ACTTTACTCCCAATACTACTTATTTCCCATATGATACTTGGCAGAAAGAA ACTACCTTCGCGAACAAGGATGACGCTGATGTTTTCTTAGGTAAGGTGCC TTTTATTTTGACTGTTGAGCTTTATGTAAATCCTGGAGGCACTTCCTTGG TCCCGGCTAACTGGGATTTTTCTTCGGAGTTTTTATGAAAGTGGTAACCT AATGAGGGCAAAGGTGTAAATGCGTTTTTGCTTTCATCGAATACCTGATA TGATGTTGTGTCACAAATATTTAAATGAAGGTTCGATCGTGTTTACTGTA TAATAATTATTTTGACTAAAATATGATCGCGATTataaaatctcattttc tttatttatagGTGAATTagattctttgtttttgttcgCCTACGCTTTTG GTTTATTCGTCAATGGTGCGTTAGGCGACCGCCTGAATCTACGATATTTC CTCGCCTTCGGCATGTGTGGTTCAGCTAtcgtcactttcattttcggtTA TCTTGGAGCAGCTTACCACGTCCGAAAAACCATTTTTTATCAGATTCTAC AGTTCTTCAATGGTCTGTTGCAATCGATCGGATGGCCAGCTGTAGTAAGT ATTATGGGGAATTGGTTCTCAAAATCTTCAGCTGGATTTGTGTTCGGGAT CTGGTCGGCAAATGCGTCCGTTGGAAACATTATCGGTTCCGTAGTTCTAG CTCAAGTGTTGAATTATGGTTACGAATATGGTATGTTGTTGAATTCTTTA ATTCTTTTTTGTGTCGGtttgattgttttgttttgcctCGTTGTCCACCC TAATGAGATCGGCCTCGAAAACCCCGATCAACAAGAACGCGTCGAAACTT TAGGACAGGAGGATAACGATCCTCTACTACCATCAAACAAAGTCGCCGTA CAACAACCAAAACCGATCAGTTTCATCCAAGCTGTTCTAATACCAGGTGT GATCCCGTACTCGTTAGCGTACGCTTGTCTGAAGTTGGTTAACTATTCGT TCTTCTTTTGGCTACCAACTTACCTCTCACAGGGTTTACACTGGAAAGAT GACAAGAGCGTCGAATTTTCAAACTTCTACGACATCGGTGGTATCTTTGG AGGTATTATCGCGGGAATCGTTAGTGATTGTATCGGAGTTCGATCACCAG TTGTCGGCATCATGTTAGCGTTTTCCGTCGGTTCAATCCTATGTTTTAAT TATTTCTCGGGAGTTTACAATGTCACAGTCGCGATCTTATTCATTAATGG TTTTATGATCGGAGGTCCAGCCAATACAATTAGTACGGCAATCACAGCTG ATCTTGGAAAACACGAGAAAATCATGGGTAATGCTGAAGCTTTGGCAACA GTCACTGGCATCGTAGACGGGACTGGCTCTGTCGGCGCTGCCATTGGCCA GTACCTTGTTGGGGTTATTAATAAGAAAGCTGGATGGCAATATGTGTTTT ATTTCTTGATCGTGATGACGGGCTTGAGTATCGTGTGTATTATTCCGATG TTAATCAACGAACTTAAATATCTGTTCCGAAGACGCCCAGACCCTAGACG ATATTCGCCTATAGGCTCTCAAGCAGAACCCGAAGAAGTACGTTCGTAAA GTTACTTATGTCGAATAATTAGATTTTAGGGATACtcttttgtgtgtttt ttctttacttattgtattttttaagttatttttggacctaccctggtgga ggtcctataaattaacctgtgttcgtccgttcgtccgtccgttcgttcgt tcgttcgtctgttaccaacttttctcaggattgaatcataggaatctttt gatttttggtacaaaggtgccaaatggtggtggccaaaatgtgacggagc ccgattttcgaaaaaaaaattttttggcaaatttgggccaaaaaacggct aaaaaactggttttttagactttgtgaaaaattggataattaattttttc tgattttttgtatgaaagtag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046785TCONS_00046785Clytia hemisphaericatranscript
TCONS_00046786TCONS_00046786Clytia hemisphaericatranscript
TCONS_00046787TCONS_00046787Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046786-proteinTCONS_00046786-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:492209..499779 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC37A3sugar phosphate exchanger 3 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.81 21.48 25.04 29.05 38.17 28.84 36.77 36.64 32.05 35.97 30.23 22.59 21.27 18.22 31.57 30.53 30.99 28.04 22.07 32.31 22.74 23.24 29.45 33.22 30.34 33.56 28.86 21.5 36.75 30.34