XLOC_029928 (gene) - C. hemisphaerica

Overview
NameXLOC_029928
Unique NameXLOC_029928
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_118:382917..387984+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029928 ID=XLOC_029928|Name=XLOC_029928|organism=Clytia hemisphaerica|type=gene|length=5068bp|location=Sequence derived from alignment at scaffold_118:382917..387984+ (Clytia hemisphaerica)
ATGAGCATCAGCGTGCAACAAACGGTTTCTTTGATAGCTCAAACAAATTC TCTCCCACTAATTTCACGCTAAAGTTTATGTTTCTAAAATAGCATATTTC TGAAACAGTAAaccaaacattttatttttagctGAATTAGGGATGTTCTA GTGcagaaaacataaaattaatggaaaaattattttctgcaCGGTTGGtt aatttattaaatttttgcATAATTCTATAAGCATATTCATtcacaaattt tacaaattgttTAATGGAAGTTATTTTTGAATATGATATGGATATTGTTG TTACATAGTTAGATTAAGATTCTGGCTGGCTGCGATTGCTGTTTACATCA TGTTTATAACTCTATGGTACTTTCTGACAACAAAATTGACGCTTGAATTA TGCAATGTTTTGTCTTGATTACCCTGTTGTTGATTGTGGCATTTGACGGT GCTTACAGTTTGTCAAAAAGAGTAAAAGGAAATTCCAGTTCTCGACAAAG GTGTAAGTAGAAATAATCTAGAATACACAGGTTGTAAAATtgaagtctga agacaaatcacgcttttactcgagtaatcacatgttttgactaaCATTGA TATAATTCTGCAACCTGTGTATTAGAAAGCCAACTGGGAGATAAgtaaaa tttcattcatttcagaaaaaaagggaaaaaaacctttgttgtttttaaca tccctgtcaaatttaattttaaaatctcCCCAGCGGAGTTTGTAAGTTAC TCTCAGTAAAACTTGAATTAAATACGATCGTAGATCAAAAGATGCAAAGA GGATTTAGATTATGTAAAGATTGAACGGGAGTTTGagttcattttcttta ttttggaaTATACTTTCCCGCTAAAAGCTATAAGAATAtgagatgagctg gagtttttataagatacttcactaattggtcatttgaaataatagagatg acgcgttctctTTAGAAACAGCAATAAAGTCCTTTGTGTCAAGATTAAAC GACCAACCGAATCATaaaaaaccttgtaaaaactccagcttgacccaagA ATATGTAGCTATatgattttctttctttcctagCTGTCCATTCCAGACGT AGTGATTTTCACACTTATAAACCGATTCATCCTCTCCAAACCGTCACACG AAACGTCAAAATTCATAGACTAGAACAAAGAGCAAAACGTGGTACGACAA TGAGTAACGATCCGTTATGTTACCGTAGCCCGATTCATCAGAATGTTACA TTGCGTGGTGGAATCGAGGCTGGTTATTTCCGAAAACTTGCAGAGCACGT TGCAATGAAATTATGTGTGGAATTATGTTGTGAAGAGAAGGGCTGTGATG TTGCTTTCATGTGGGGAAAACACTGTTATGGTGTGCAATGCTTTAATCAT GAGCTTTGTGAAGTAGTTCCCGCTAAACAGAAGATTAACGAACCGATCAT GTTGTCCCATGTCACTTTTCAAGGAGAAACACGTAAGTGAAATCGTTGGT AACATCCCCTAGTAACATCACTGTATCTGAGCGATTTTCTGTAATTCAGA CAAAAATACTTAAAGTCTTGTGGAAATTTTCACCAGTCGCAAAATTCTCC TCTGGAAGGATTTGTCAAAAGTATTGTCTGTGTAACTCATGTCAAATCTC TGTATAACCATTTCGTATTCTTTATTTAGTACACAGAGAGAAGCTGTCAA AGAAACGCAAAGAAGAATGTATAGCCACCGAAGTCCAACCCGGCGTCGCC TTACGTGGTGGTTTGAAAGCTGGCAATTTCACACATATTGGGACAGTTCC GAATATGCGTTCATGTACCAATTTATGTTGTGCAAAAAGTAGATGTGATT TAGCCATCGTTTTGAATGATCAATGCTTTGCACTGGCTTGTTTCACACCT GTTTTATGCGAAATGACACGTGCTTTCTCACAAACTTATAAACCAAAAAT GTCGTATATCTTGAAAAGTGGCGATTATGAGGAACAGCCAAGAAATGGTA GGATAATCTAAAAGTTATGCCCCTCCCggtttcgttttcaagcaaaggga agttttgaatgttcttacCTTAACGACCAGTATCTGACTGGTCAAATTTG CAACGTCTTTTTAAAGCAGGGCGTCGTGTGTGCATAACGACGAGGGTTAG GGGATTAGAAATACCGTGactcaaattttaatttcatttcaactttactt ttttcTTAGCTACTACAAAGCATTATCAACAAAGTCAGTCGCATGTCAgc gaaacaaaaacaaaaactcagGCACCTCCATCATTGAACAGTCAATCACC AAATAttcaaaacgaaagtgaatcCGAGAATGATGTTGAAGATGAACAAA AAGTCAAAGGAAAAGGGAACGCTCTCACATGCAAGAATAGTCCGATATAC ATAAATTCAACCTTGAAGGGTGGTTTCAAGGCGGGGAATTATACAAATTT AGGTCGCGTTGAGAACATGAGTGAATGTGTAAGACTTTGTTGTGGGAACA GTCAATGCAACGCAGCATTGATGCTTGAGAATAATTGTTTCTTTGTTGAG TGTAAGAATGCTGATGGATGTTTGCCGGTGAAAGCGAAAACCACACACGC ATTGGCTGCGCTTAATCCGAGAGTATCGTTTATTACAAGTCGGAACGAGG AAGGTAAGTGATCTGTATAGGCGAGTTCACGATCAAAATGAGTCGTAGAT AAATATGACTGATCAGgctcctacacgtttttttttaataagaacaaact atataagaacataaggctttgctggccaaaatattaagaacaagttaaga acatcacaaaatggtcaaaataagaaaatgttaagaacatttttacgcTT TAAACTCACAAAATTAAGagcatctgaaggcttcaaaaattttggatgtt cttatttaaaagaaaacgtgtacaaCCCTTGGTTAGACGTGAAAACCTCA AGATTTTTAGACCACTGCAAATTCATTATTGGAGCTTGCTGTGGTGGTCC TGTCGCTCGTGATTCCTTTTGACCGTGAAATGTTCTGTTAGCGAAAAGTG CTATAAATAATAACTCATGAACTGCAGTTTGATGAGTCGGGCCACCTTGA TTTTATCGACCCAGTAATGGCTGAAGATGCCATAAGAATCACTTGAAACG TACAGTAGCGAAAATTAAACCTCATGATGCAACCAATAACAAGACTTCCA ATATGGTTTAAGAAAGTTCCACACTTAACGAATTCCCTGCTAAATTATCT TCAACAGCCCTTTACAACCAaccttacacgtttttttataagaacatcca aaatttttgaagccttcaaatgCTCTTAAAGTTTTTGAGCACTTTTGTCC ATTTCCCTCAGAAATGGGTTGGTTTAGAgtctttgaaatgttcttaactt tttcttaacattttggccatcgaagccttatgttgttatatagttttttc ttataaaaaaaacgtgtatcttatcgaaacttttttcaattcttttagct CCTTTGCCGAACCAAAAGACAAAAGAGGGAGTCTGTCGTCCTGGTGTGAT ATCATATGACGTCAGCTTGAAGGGTGGCTCCCAGGCTGGTAACTTCACAC CGCACGGCCGCGTCTCCAACATGGAGGACTGCATCCGTAAATGTTGTACA CGTAAAGGATGTGACTTAGCGATGATGCTAAAAGACATCTGTTATACGGT CGTTtgtaaaagtgaaaaactttgtgaaaaGAAGCACATGTCTCTATCGA ATGGATTTAGACCCAAAATTGCATATGTTTTcaaagataagaaaaacata GCAATATTAGGCGATAATAAGTCAAAAACCAAAACAATTTCTAATCAAAG tagaaacaaaaatcaaaatacacgCGTCAAAACACCAAACAACAGCTTAT CATTATCAAATAATAAATATCGTGACCAAGAAGTACATCAAACCAATCAA TCAAATGTTACTATTCAAAGAGATCCTTGGAAAGAATCACTATCATCAAA ATCAAAGTTTAGTCCGAATGTAGTGTTTGACCAAGAGACAGACAATAGCA CAACTGTTCAATATCTTCTAAAATTGTTGAAATCGAATATTGGAAGCCCT CATATGCAGACATCAACCCAACAAGaaataaatgatgacgtcatcgatga tgTAACAACTTCTCAAGATGACGCCGCAATAAATACTGAGTTCGAAAATG ATAGTGACAATACTAGACCAGCGAACCAAGagtcaaaaaataaagttcaa TGTCAAAACAGTGATTGTAAGAGgcaggaatttcaaaaaacttgttTATC AAATTTATGCAATAGGCCTTTAAACAGAGCTGGTAATACCGggcttgttt taaacaaaaacctGGAAGATAAAGACCAAAATACTGAAAGACCATCACAA GCAAGGAACATGATAAATTCTAAGAAATTAGCTGTGACTACACAAAAAAT TCCTAATAATAATGTATCAATGCAAAGGCACTCAGAAGTGGTTACCAATA CCTTAACAAGAAATACGAAGAAGTCTGACTCCACTTCTTATTTAAACTCA TTGAAAGAACCTTTAGCTGTAGTCAAGTCGCTTTTTACTTTGGTACACGC TGCGGACAAAAACATCGAAGGTGACGACCCGAGTTGCACGTATAGCGAAC CCTTACAGAACGCCACTTTACGTGGAAACCTGCACTCAGGTAAGTTTACA GACCGCGGCGATATGGATAGTATACAACAATGCATCAGGTTATGTTGTAT GTTGAAAGGATGCGACTTAGCGTTTATGTTGGATAAGAAATGTTTCACCG TGCAATGTAAGAATCAGAAACTTTGTGAACCAGTCCAATCaaaatcgaac aaattttcaCCAACTTTATGTTACATTCTGGTGAAATCAGCTCATCGATA ggaatttataaattttgtaaaatacacTTATTTTGTAATGTAAATTGAAA GGTTTTGGCTTAAAGCTCGACAAagctcaacttttttttcagatgagttt ttataagatactttaataattggacATTacaaatgacgcgttctttagaa ctATTCGCTTCGTTTCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046903TCONS_00046903Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046903-proteinTCONS_00046903-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_118supercontigscaffold_118:382917..387984 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.02 0.05 0.01 0.19 0.01 2.3 2.56 0.82 0.49 1.24 1.56 1.84 1.63 0.93 3.52 1.39 1.69 0.01 0.17 0.99 0.8 0.52 0.66 1.2 1.71 0.18 0.03 0.01 0